RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 GAS2L2Q8NHY3 880 aa15.47■□□□□ 0.07
TSKU-203ENST00000527881 TSC1Q92574 1164 aa15.47■□□□□ 0.07
TSKU-203ENST00000527881 MAGI2Q86UL8 1455 aa15.47■□□□□ 0.07
TSKU-203ENST00000527881 CD2BP2O95400 341 aaKnown RBP15.47■□□□□ 0.07
TSKU-203ENST00000527881 PRIM1P49642 420 aaKnown RBP15.47■□□□□ 0.07
TSKU-203ENST00000527881 HS1BP3Q53T59 392 aa15.47■□□□□ 0.07
TSKU-203ENST00000527881 NGEFQ8N5V2 710 aa15.47■□□□□ 0.07
TSKU-203ENST00000527881 CCDC39Q9UFE4 941 aa15.47■□□□□ 0.07
TSKU-203ENST00000527881 TCP11L2Q8N4U5 519 aa15.46■□□□□ 0.07
TSKU-203ENST00000527881 DMTNQ08495 405 aa15.46■□□□□ 0.07
TSKU-203ENST00000527881 ZMYM3Q14202 1370 aa15.46■□□□□ 0.07
TSKU-203ENST00000527881 RBM27Q9P2N5 1060 aaKnown RBP15.46■□□□□ 0.07
TSKU-203ENST00000527881 PRPF40AO75400 957 aaKnown RBP15.46■□□□□ 0.06
TSKU-203ENST00000527881 DDIT3P35638 169 aa15.46■□□□□ 0.06
TSKU-203ENST00000527881 FOXD4L5Q5VV16 416 aaPredicted RBP15.46■□□□□ 0.06
TSKU-203ENST00000527881 FOXD4L4Q8WXT5 416 aaPredicted RBP15.46■□□□□ 0.06
TSKU-203ENST00000527881 RTEL1-TNFRSF6BF6WH68 1400 aa15.45■□□□□ 0.06
TSKU-203ENST00000527881 RBM25P49756 843 aaKnown RBP15.45■□□□□ 0.06
TSKU-203ENST00000527881 WDR62O43379 1518 aa15.45■□□□□ 0.06
TSKU-203ENST00000527881 JARID2Q92833 1246 aaPredicted RBP15.44■□□□□ 0.06
TSKU-203ENST00000527881 C9orf84Q5VXU9 1444 aa15.44■□□□□ 0.06
TSKU-203ENST00000527881 FAM177BA6PVY3 158 aa15.44■□□□□ 0.06
TSKU-203ENST00000527881 KIAA2012Q0VF49 1180 aa15.43■□□□□ 0.06
TSKU-203ENST00000527881 PIK3C2GO75747 1445 aa15.43■□□□□ 0.06
TSKU-203ENST00000527881 SYCE3A1L190 88 aa15.42■□□□□ 0.06
TSKU-203ENST00000527881 ZNF445P59923 1031 aa15.42■□□□□ 0.06
TSKU-203ENST00000527881 TPRNQ4KMQ1 711 aa15.42■□□□□ 0.06
TSKU-203ENST00000527881 RUNDC1Q96C34 613 aa15.42■□□□□ 0.06
TSKU-203ENST00000527881 PPP4R3BQ5MIZ7 849 aa15.41■□□□□ 0.06
TSKU-203ENST00000527881 ANKRD45Q5TZF3 282 aa15.41■□□□□ 0.06
TSKU-203ENST00000527881 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.41■□□□□ 0.06
TSKU-203ENST00000527881 DDX19BQ9UMR2 479 aa15.41■□□□□ 0.06
TSKU-203ENST00000527881 GPRASP1Q5JY77 1395 aa15.41■□□□□ 0.06
TSKU-203ENST00000527881 IGSF3O75054 1194 aa15.41■□□□□ 0.06
TSKU-203ENST00000527881 UTP14CQ5TAP6 766 aaKnown RBP15.41■□□□□ 0.06
TSKU-203ENST00000527881 TSR2Q969E8 191 aaKnown RBP15.41■□□□□ 0.06
TSKU-203ENST00000527881 NCOA3Q9Y6Q9 1424 aa15.41■□□□□ 0.06
TSKU-203ENST00000527881 SPDYE4A6NLX3 237 aa15.4■□□□□ 0.06
TSKU-203ENST00000527881 ZSCAN20P17040 1043 aaPredicted RBP15.4■□□□□ 0.06
TSKU-203ENST00000527881 MORC1Q86VD1 984 aa15.4■□□□□ 0.06
TSKU-203ENST00000527881 LAMC3Q9Y6N6 1575 aa15.4■□□□□ 0.06
TSKU-203ENST00000527881 NUCB2P80303 420 aa15.4■□□□□ 0.06
TSKU-203ENST00000527881 TROQ12816 1431 aaPredicted RBP15.4■□□□□ 0.06
TSKU-203ENST00000527881 MCM5P33992 734 aa15.4■□□□□ 0.06
TSKU-203ENST00000527881 ASXL1Q8IXJ9 1541 aa15.39■□□□□ 0.06
TSKU-203ENST00000527881 KDM5DQ9BY66 1539 aa15.39■□□□□ 0.06
TSKU-203ENST00000527881 GPATCH8Q9UKJ3 1502 aaKnown RBP15.39■□□□□ 0.06
TSKU-203ENST00000527881 PLEKHD1A6NEE1 506 aa15.39■□□□□ 0.05
TSKU-203ENST00000527881 ADGRL2O95490 1459 aa15.39■□□□□ 0.05
TSKU-203ENST00000527881 KIF16BQ96L93 1317 aa15.39■□□□□ 0.05
TSKU-203ENST00000527881 IQGAP2Q13576 1575 aa15.39■□□□□ 0.05
TSKU-203ENST00000527881 WDR7Q9Y4E6 1490 aa15.39■□□□□ 0.05
TSKU-203ENST00000527881 CLASP1Q7Z460 1538 aa15.39■□□□□ 0.05
TSKU-203ENST00000527881 TRPM1Q7Z4N2 1603 aa15.38■□□□□ 0.05
TSKU-203ENST00000527881 PLCB2Q00722 1185 aa15.38■□□□□ 0.05
TSKU-203ENST00000527881 IBTKQ9P2D0 1353 aaPredicted RBP15.38■□□□□ 0.05
TSKU-203ENST00000527881 A2MP01023 1474 aa15.38■□□□□ 0.05
TSKU-203ENST00000527881 ADGBQ8N7X0 1667 aa15.38■□□□□ 0.05
TSKU-203ENST00000527881 TRIM27P14373 513 aa15.37■□□□□ 0.05
TSKU-203ENST00000527881 CDK11BP21127 795 aaKnown RBP15.37■□□□□ 0.05
TSKU-203ENST00000527881 HDAC1Q13547 482 aaPredicted RBP15.37■□□□□ 0.05
TSKU-203ENST00000527881 CHD1LQ86WJ1 897 aa15.37■□□□□ 0.05
TSKU-203ENST00000527881 PDLIM2Q96JY6 352 aa15.37■□□□□ 0.05
TSKU-203ENST00000527881 CEP170Q5SW79 1584 aa15.37■□□□□ 0.05
TSKU-203ENST00000527881 NUP153P49790 1475 aaKnown RBP15.36■□□□□ 0.05
TSKU-203ENST00000527881 PDS5BQ9NTI5 1447 aa15.36■□□□□ 0.05
TSKU-203ENST00000527881 U2AF1L5P0DN76 240 aaPredicted RBP15.36■□□□□ 0.05
TSKU-203ENST00000527881 U2AF1Q01081 240 aaKnown RBP eCLIP15.36■□□□□ 0.05
TSKU-203ENST00000527881 ZNF830Q96NB3 372 aaPredicted RBP15.36■□□□□ 0.05
TSKU-203ENST00000527881 LMBRD1Q9NUN5 540 aa15.36■□□□□ 0.05
TSKU-203ENST00000527881 PKP1Q13835 747 aa15.36■□□□□ 0.05
TSKU-203ENST00000527881 ABCC2Q92887 1545 aa15.36■□□□□ 0.05
TSKU-203ENST00000527881 TBC1D9Q6ZT07 1266 aa15.36■□□□□ 0.05
TSKU-203ENST00000527881 ZNF771Q7L3S4 317 aaPredicted RBP15.36■□□□□ 0.05
TSKU-203ENST00000527881 WDR63Q8IWG1 891 aa15.36■□□□□ 0.05
TSKU-203ENST00000527881 MYRIPQ8NFW9 859 aa15.36■□□□□ 0.05
TSKU-203ENST00000527881 GTPBP4Q9BZE4 634 aaKnown RBP15.36■□□□□ 0.05
TSKU-203ENST00000527881 TMEM57Q8N5G2 664 aa15.35■□□□□ 0.05
TSKU-203ENST00000527881 FAM135AQ9P2D6 1515 aa15.35■□□□□ 0.05
TSKU-203ENST00000527881 EXOSC9Q06265 439 aaKnown RBP15.35■□□□□ 0.05
TSKU-203ENST00000527881 FOXD4L6Q3SYB3 417 aaPredicted RBP15.35■□□□□ 0.05
TSKU-203ENST00000527881 FOXD4L3Q6VB84 417 aaPredicted RBP15.35■□□□□ 0.05
TSKU-203ENST00000527881 CHAMP1Q96JM3 812 aa15.35■□□□□ 0.05
TSKU-203ENST00000527881 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.35■□□□□ 0.056e-6■□□□□ 11.1
TSKU-203ENST00000527881 HMGN5P82970 282 aaKnown RBP15.35■□□□□ 0.05
TSKU-203ENST00000527881 KIF2CQ99661 725 aa15.35■□□□□ 0.05
TSKU-203ENST00000527881 BCL11BQ9C0K0 894 aaPredicted RBP15.35■□□□□ 0.05
TSKU-203ENST00000527881 NOB1Q9ULX3 412 aaKnown RBP15.34■□□□□ 0.05
TSKU-203ENST00000527881 KIF3AQ9Y496 699 aa15.34■□□□□ 0.05
TSKU-203ENST00000527881 ATF7IPQ6VMQ6 1270 aa15.34■□□□□ 0.05
TSKU-203ENST00000527881 CFAP53Q96M91 514 aa15.34■□□□□ 0.05
TSKU-203ENST00000527881 CGNQ9P2M7 1197 aaKnown RBP15.34■□□□□ 0.05
TSKU-203ENST00000527881 KIF20AO95235 890 aa15.34■□□□□ 0.05
TSKU-203ENST00000527881 NUCB1Q02818 461 aa15.34■□□□□ 0.05
TSKU-203ENST00000527881 LRSAM1Q6UWE0 723 aa15.34■□□□□ 0.05
TSKU-203ENST00000527881 CHMP4BQ9H444 224 aaKnown RBP15.34■□□□□ 0.05
TSKU-203ENST00000527881 PRDM15P57071 1507 aaPredicted RBP15.33■□□□□ 0.05
TSKU-203ENST00000527881 LETM1O95202 739 aaPredicted RBP15.33■□□□□ 0.04
TSKU-203ENST00000527881 BMP2KLQ5H9B9 411 aa15.33■□□□□ 0.04
TSKU-203ENST00000527881 C17orf53Q8N3J3 647 aaPredicted RBP15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms