RNA–Protein interactions for RNA: ENST00000527765.1

SYVN1-209, Transcript of synoviolin 1, humanhuman

TSL 3

Gene SYVN1, Length 516 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-209ENST00000527765 MYOM2P54296 1465 aa18.84■□□□□ 0.61
SYVN1-209ENST00000527765 YTHDC2Q9H6S0 1430 aaKnown RBP18.84■□□□□ 0.61
SYVN1-209ENST00000527765 ESCO1Q5FWF5 840 aa18.84■□□□□ 0.61
SYVN1-209ENST00000527765 ZNF772Q68DY9 489 aaPredicted RBP18.84■□□□□ 0.61
SYVN1-209ENST00000527765 DCAF11Q8TEB1 546 aa18.84■□□□□ 0.61
SYVN1-209ENST00000527765 ORAI2Q96SN7 254 aa18.84■□□□□ 0.61
SYVN1-209ENST00000527765 DDX17Q92841 729 aaKnown RBP18.83■□□□□ 0.6
SYVN1-209ENST00000527765 KDM2AQ9Y2K7 1162 aa18.83■□□□□ 0.6
SYVN1-209ENST00000527765 POTEAQ6S8J7 498 aa18.82■□□□□ 0.6
SYVN1-209ENST00000527765 POGKQ9P215 609 aa18.81■□□□□ 0.6
SYVN1-209ENST00000527765 NRXN1Q9ULB1 1477 aa18.81■□□□□ 0.6
SYVN1-209ENST00000527765 SHPRHQ149N8 1683 aa18.81■□□□□ 0.6
SYVN1-209ENST00000527765 NPHP3Q7Z494 1330 aa18.8■□□□□ 0.6
SYVN1-209ENST00000527765 CDC42BPGQ6DT37 1551 aa18.8■□□□□ 0.6
SYVN1-209ENST00000527765 LAMC1P11047 1609 aa18.79■□□□□ 0.6
SYVN1-209ENST00000527765 NHSL1Q5SYE7 1610 aa18.79■□□□□ 0.6
SYVN1-209ENST00000527765 SOS2Q07890 1332 aaPredicted RBP18.78■□□□□ 0.6
SYVN1-209ENST00000527765 NUTM2FA1L443 756 aa18.78■□□□□ 0.6
SYVN1-209ENST00000527765 PRAM1Q96QH2 718 aa18.77■□□□□ 0.6
SYVN1-209ENST00000527765 LRP6O75581 1613 aa18.77■□□□□ 0.6
SYVN1-209ENST00000527765 PNPLA6Q8IY17 1366 aa18.77■□□□□ 0.6
SYVN1-209ENST00000527765 PLEKHH1Q9ULM0 1364 aa18.77■□□□□ 0.6
SYVN1-209ENST00000527765 FOXO3O43524 673 aa18.76■□□□□ 0.59
SYVN1-209ENST00000527765 KNDC1Q76NI1 1749 aa18.75■□□□□ 0.59
SYVN1-209ENST00000527765 SAFB2Q14151 953 aaKnown RBP eCLIP18.75■□□□□ 0.59
SYVN1-209ENST00000527765 C8orf37Q96NL8 207 aa18.74■□□□□ 0.59
SYVN1-209ENST00000527765 TRAK1Q9UPV9 953 aa18.73■□□□□ 0.59
SYVN1-209ENST00000527765 ADAMTS2O95450 1211 aa18.72■□□□□ 0.59
SYVN1-209ENST00000527765 RXRBP28702 533 aa18.72■□□□□ 0.59
SYVN1-209ENST00000527765 NGLY1Q96IV0 654 aa18.72■□□□□ 0.59
SYVN1-209ENST00000527765 AFF2P51816 1311 aa18.72■□□□□ 0.59
SYVN1-209ENST00000527765 PSME1Q06323 249 aa18.7■□□□□ 0.58
SYVN1-209ENST00000527765 DLC1Q96QB1 1528 aa18.69■□□□□ 0.58
SYVN1-209ENST00000527765 XPCQ01831 940 aaPredicted RBP18.69■□□□□ 0.58
SYVN1-209ENST00000527765 PHF8Q9UPP1 1060 aa18.69■□□□□ 0.58
SYVN1-209ENST00000527765 EIF3AQ14152 1382 aaKnown RBP18.68■□□□□ 0.58
SYVN1-209ENST00000527765 KRT28Q7Z3Y7 464 aa18.67■□□□□ 0.58
SYVN1-209ENST00000527765 QTRT2Q9H974 415 aaKnown RBP18.66■□□□□ 0.58
SYVN1-209ENST00000527765 PXDNQ92626 1479 aa18.65■□□□□ 0.58
SYVN1-209ENST00000527765 ADGRB1O14514 1584 aa18.65■□□□□ 0.58
SYVN1-209ENST00000527765 HIRIP3Q9BW71 556 aaPredicted RBP18.65■□□□□ 0.58
SYVN1-209ENST00000527765 MINK1Q8N4C8 1332 aaPredicted RBP18.65■□□□□ 0.58
SYVN1-209ENST00000527765 FMN2Q9NZ56 1722 aa18.65■□□□□ 0.58
SYVN1-209ENST00000527765 ANKARQ7Z5J8 1434 aa18.64■□□□□ 0.57
SYVN1-209ENST00000527765 KIF1AQ12756 1690 aa18.63■□□□□ 0.57
SYVN1-209ENST00000527765 HAP1P54257 671 aaPredicted RBP18.63■□□□□ 0.57
SYVN1-209ENST00000527765 RBM6P78332 1123 aaKnown RBP18.63■□□□□ 0.57
SYVN1-209ENST00000527765 USP21Q9UK80 565 aa18.63■□□□□ 0.57
SYVN1-209ENST00000527765 WASLO00401 505 aaPredicted RBP18.62■□□□□ 0.57
SYVN1-209ENST00000527765 SPATA31A3Q5VYP0 1347 aa18.62■□□□□ 0.57
SYVN1-209ENST00000527765 LMOD2Q6P5Q4 547 aa18.61■□□□□ 0.57
SYVN1-209ENST00000527765 TRPC5Q9UL62 973 aaPredicted RBP18.61■□□□□ 0.57
SYVN1-209ENST00000527765 FNBP4Q8N3X1 1017 aaPredicted RBP18.6■□□□□ 0.57
SYVN1-209ENST00000527765 PMFBP1Q8TBY8 1022 aa18.6■□□□□ 0.57
SYVN1-209ENST00000527765 GPRASP1Q5JY77 1395 aa18.59■□□□□ 0.57
SYVN1-209ENST00000527765 COL22A1Q8NFW1 1626 aaPredicted RBP18.59■□□□□ 0.57
SYVN1-209ENST00000527765 CDK12Q9NYV4 1490 aaPredicted RBP18.58■□□□□ 0.56
SYVN1-209ENST00000527765 SBNO1A3KN83 1393 aa18.57■□□□□ 0.56
SYVN1-209ENST00000527765 ARHGEF10O15013 1369 aa18.57■□□□□ 0.56
SYVN1-209ENST00000527765 ADGRB2O60241 1585 aa18.57■□□□□ 0.56
SYVN1-209ENST00000527765 NEUROD1Q13562 356 aa18.57■□□□□ 0.56
SYVN1-209ENST00000527765 NGDNQ8NEJ9 315 aaKnown RBP18.57■□□□□ 0.56
SYVN1-209ENST00000527765 TNS3Q68CZ2 1445 aa18.57■□□□□ 0.56
SYVN1-209ENST00000527765 L3MBTL2Q969R5 705 aa18.55■□□□□ 0.56
SYVN1-209ENST00000527765 TULP4Q9NRJ4 1543 aa18.54■□□□□ 0.56
SYVN1-209ENST00000527765 PLEKHG5O94827 1062 aa18.54■□□□□ 0.56
SYVN1-209ENST00000527765 NBPF1Q3BBV0 1214 aa18.54■□□□□ 0.56
SYVN1-209ENST00000527765 NUDT16Q96DE0 195 aaKnown RBP18.53■□□□□ 0.56
SYVN1-209ENST00000527765 SIN3AQ96ST3 1273 aa18.53■□□□□ 0.56
SYVN1-209ENST00000527765 CDK19Q9BWU1 502 aa18.53■□□□□ 0.56
SYVN1-209ENST00000527765 KIAA1210Q9ULL0 1709 aa18.52■□□□□ 0.56
SYVN1-209ENST00000527765 PAK3O75914 559 aaPredicted RBP18.52■□□□□ 0.56
SYVN1-209ENST00000527765 PRR36Q9H6K5 1346 aa18.51■□□□□ 0.55
SYVN1-209ENST00000527765 RGPD8O14715 1765 aaPredicted RBP18.51■□□□□ 0.55
SYVN1-209ENST00000527765 UNC5CLQ8IV45 518 aa18.5■□□□□ 0.55
SYVN1-209ENST00000527765 CABLES1Q8TDN4 633 aa18.5■□□□□ 0.55
SYVN1-209ENST00000527765 CENPJQ9HC77 1338 aaPredicted RBP18.49■□□□□ 0.55
SYVN1-209ENST00000527765 TRIM26Q12899 539 aaPredicted RBP18.49■□□□□ 0.55
SYVN1-209ENST00000527765 UPF1Q92900 1129 aaKnown RBP eCLIP18.49■□□□□ 0.554e-9■□□□□ 9.7
SYVN1-209ENST00000527765 CCDC61Q9Y6R9 512 aa18.49■□□□□ 0.55
SYVN1-209ENST00000527765 ARHGEF28Q8N1W1 1705 aaKnown RBP18.49■□□□□ 0.55
SYVN1-209ENST00000527765 SRPK2P78362 688 aaKnown RBP18.48■□□□□ 0.55
SYVN1-209ENST00000527765 GJD4Q96KN9 370 aaPredicted RBP18.48■□□□□ 0.55
SYVN1-209ENST00000527765 USP32Q8NFA0 1604 aa18.48■□□□□ 0.55
SYVN1-209ENST00000527765 ATRNO75882 1429 aa18.48■□□□□ 0.55
SYVN1-209ENST00000527765 BCL9LQ86UU0 1499 aa18.47■□□□□ 0.55
SYVN1-209ENST00000527765 RGS12O14924 1447 aa18.47■□□□□ 0.55
SYVN1-209ENST00000527765 ROCK2O75116 1388 aaKnown RBP18.44■□□□□ 0.54
SYVN1-209ENST00000527765 CCDC9Q9Y3X0 531 aaKnown RBP18.44■□□□□ 0.54
SYVN1-209ENST00000527765 ATP7BP35670 1465 aa18.44■□□□□ 0.54
SYVN1-209ENST00000527765 ATAD2Q6PL18 1390 aa18.43■□□□□ 0.54
SYVN1-209ENST00000527765 MARF1Q9Y4F3 1742 aaKnown RBP18.43■□□□□ 0.54
SYVN1-209ENST00000527765 PLEKHG3A1L390 1219 aa18.43■□□□□ 0.54
SYVN1-209ENST00000527765 NBPF8Q3BBV2 869 aa18.43■□□□□ 0.54
SYVN1-209ENST00000527765 ACEP12821 1306 aa18.43■□□□□ 0.54
SYVN1-209ENST00000527765 ITSN1Q15811 1721 aa18.42■□□□□ 0.54
SYVN1-209ENST00000527765 SLIT2O94813 1529 aa18.42■□□□□ 0.54
SYVN1-209ENST00000527765 FAM83GA6ND36 823 aa18.41■□□□□ 0.54
SYVN1-209ENST00000527765 VPS72Q15906 364 aa18.41■□□□□ 0.54
SYVN1-209ENST00000527765 EVC2Q86UK5 1308 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms