RNA–Protein interactions for RNA: ENST00000527333.5

CKAP5-208, Transcript of cytoskeleton associated protein 5, humanhuman

TSL 5

Gene CKAP5, Length 498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP5-208ENST00000527333 SNPHO15079 494 aa13.22□□□□□ -0.29
CKAP5-208ENST00000527333 SIN3AQ96ST3 1273 aa13.22□□□□□ -0.29
CKAP5-208ENST00000527333 NCKAP5LQ9HCH0 1330 aa13.21□□□□□ -0.29
CKAP5-208ENST00000527333 TIMELESSQ9UNS1 1208 aa13.21□□□□□ -0.29
CKAP5-208ENST00000527333 KDM5DQ9BY66 1539 aa13.21□□□□□ -0.29
CKAP5-208ENST00000527333 DDX27Q96GQ7 796 aaKnown RBP13.2□□□□□ -0.3
CKAP5-208ENST00000527333 FOXK1P85037 733 aa13.19□□□□□ -0.3
CKAP5-208ENST00000527333 MROH1Q8NDA8 1641 aa13.19□□□□□ -0.3
CKAP5-208ENST00000527333 SIGLEC1Q9BZZ2 1709 aa13.19□□□□□ -0.3
CKAP5-208ENST00000527333 PRDM15P57071 1507 aaPredicted RBP13.18□□□□□ -0.3
CKAP5-208ENST00000527333 IQGAP3Q86VI3 1631 aa13.18□□□□□ -0.3
CKAP5-208ENST00000527333 MPHOSPH9Q99550 1183 aa13.18□□□□□ -0.3
CKAP5-208ENST00000527333 VWDEQ8N2E2 1590 aa13.18□□□□□ -0.3
CKAP5-208ENST00000527333 PZPP20742 1482 aa13.16□□□□□ -0.3
CKAP5-208ENST00000527333 KIF3BO15066 747 aa13.16□□□□□ -0.3
CKAP5-208ENST00000527333 DSG2Q14126 1118 aa13.16□□□□□ -0.3
CKAP5-208ENST00000527333 PPP1R15BQ5SWA1 713 aa13.16□□□□□ -0.3
CKAP5-208ENST00000527333 PLPP6Q8IY26 295 aa13.16□□□□□ -0.3
CKAP5-208ENST00000527333 FAM135AQ9P2D6 1515 aa13.16□□□□□ -0.3
CKAP5-208ENST00000527333 NUP155O75694 1391 aa13.15□□□□□ -0.3
CKAP5-208ENST00000527333 ZNF316A6NFI3 1004 aaPredicted RBP13.14□□□□□ -0.31
CKAP5-208ENST00000527333 VSIG10Q8N0Z9 540 aa13.14□□□□□ -0.31
CKAP5-208ENST00000527333 TRIM52Q96A61 297 aa13.14□□□□□ -0.31
CKAP5-208ENST00000527333 ANKRD30BQ9BXX2 1392 aa13.14□□□□□ -0.31
CKAP5-208ENST00000527333 LMTK2Q8IWU2 1503 aa13.13□□□□□ -0.31
CKAP5-208ENST00000527333 ZC3H13Q5T200 1668 aaKnown RBP13.13□□□□□ -0.31
CKAP5-208ENST00000527333 KANK1Q14678 1352 aa13.13□□□□□ -0.31
CKAP5-208ENST00000527333 PPP1R15AO75807 674 aaPredicted RBP13.13□□□□□ -0.31
CKAP5-208ENST00000527333 MFSD10Q14728 455 aa13.13□□□□□ -0.31
CKAP5-208ENST00000527333 DOK7Q18PE1 504 aa13.13□□□□□ -0.31
CKAP5-208ENST00000527333 TET3O43151 1660 aa13.12□□□□□ -0.31
CKAP5-208ENST00000527333 RIMBP2O15034 1052 aa13.12□□□□□ -0.31
CKAP5-208ENST00000527333 ZNF710Q8N1W2 664 aa13.11□□□□□ -0.31
CKAP5-208ENST00000527333 ABCC3O15438 1527 aa13.11□□□□□ -0.31
CKAP5-208ENST00000527333 CEP152O94986 1710 aa13.1□□□□□ -0.31
CKAP5-208ENST00000527333 GGT6Q6P531 493 aa13.09□□□□□ -0.31
CKAP5-208ENST00000527333 EFCAB6Q5THR3 1501 aa13.08□□□□□ -0.31
CKAP5-208ENST00000527333 NEUROD1Q13562 356 aa13.08□□□□□ -0.32
CKAP5-208ENST00000527333 CAMSAP1Q5T5Y3 1602 aa13.07□□□□□ -0.32
CKAP5-208ENST00000527333 E9PCH4 1651 aa13.06□□□□□ -0.32
CKAP5-208ENST00000527333 ARID4BQ4LE39 1312 aaPredicted RBP13.06□□□□□ -0.32
CKAP5-208ENST00000527333 MROH2AA6NES4 1674 aa13.05□□□□□ -0.32
CKAP5-208ENST00000527333 ARHGAP31Q2M1Z3 1444 aa13.05□□□□□ -0.32
CKAP5-208ENST00000527333 RPRD2Q5VT52 1461 aaKnown RBP13.05□□□□□ -0.32
CKAP5-208ENST00000527333 TBC1D12O60347 775 aa13.05□□□□□ -0.32
CKAP5-208ENST00000527333 SLC24A1O60721 1099 aa13.05□□□□□ -0.32
CKAP5-208ENST00000527333 FAM163AQ96GL9 167 aaPredicted RBP13.05□□□□□ -0.32
CKAP5-208ENST00000527333 WASHC2CQ9Y4E1 1318 aa13.05□□□□□ -0.32
CKAP5-208ENST00000527333 CLTCQ00610 1675 aaKnown RBP13.05□□□□□ -0.32
CKAP5-208ENST00000527333 CNTLNQ9NXG0 1405 aa13.05□□□□□ -0.32
CKAP5-208ENST00000527333 SLC34A2O95436 690 aa13.04□□□□□ -0.32
CKAP5-208ENST00000527333 E2F4Q16254 413 aa13.04□□□□□ -0.32
CKAP5-208ENST00000527333 FER1L4A9Z1Z3 1794 aa13.04□□□□□ -0.32
CKAP5-208ENST00000527333 ADAMTSL3P82987 1691 aa13.03□□□□□ -0.32
CKAP5-208ENST00000527333 HOXB3P14651 431 aaPredicted RBP13.03□□□□□ -0.32
CKAP5-208ENST00000527333 ZSWIM6Q9HCJ5 1215 aa13.02□□□□□ -0.33
CKAP5-208ENST00000527333 KDM2AQ9Y2K7 1162 aa13.02□□□□□ -0.33
CKAP5-208ENST00000527333 SPHKAPQ2M3C7 1700 aa13.02□□□□□ -0.33
CKAP5-208ENST00000527333 MLECQ14165 292 aa13.01□□□□□ -0.33
CKAP5-208ENST00000527333 PTPRTO14522 1441 aa13.01□□□□□ -0.33
CKAP5-208ENST00000527333 NPATQ14207 1427 aa13.01□□□□□ -0.33
CKAP5-208ENST00000527333 PREX1Q8TCU6 1659 aa12.99□□□□□ -0.33
CKAP5-208ENST00000527333 MADDQ8WXG6 1647 aa12.99□□□□□ -0.33
CKAP5-208ENST00000527333 TRPM2O94759 1503 aa12.99□□□□□ -0.33
CKAP5-208ENST00000527333 PLA2R1Q13018 1463 aa12.99□□□□□ -0.33
CKAP5-208ENST00000527333 TONSLQ96HA7 1378 aa12.99□□□□□ -0.33
CKAP5-208ENST00000527333 PTCD2Q8WV60 388 aaKnown RBP12.99□□□□□ -0.33
CKAP5-208ENST00000527333 UPF1Q92900 1129 aaKnown RBP eCLIP12.99□□□□□ -0.33
CKAP5-208ENST00000527333 L3MBTL2Q969R5 705 aa12.99□□□□□ -0.33
CKAP5-208ENST00000527333 ESF1Q9H501 851 aaKnown RBP12.99□□□□□ -0.33
CKAP5-208ENST00000527333 NOS1P29475 1434 aa12.98□□□□□ -0.33
CKAP5-208ENST00000527333 MAP3K9P80192 1104 aa12.98□□□□□ -0.33
CKAP5-208ENST00000527333 CAMK2BQ13554 666 aa12.98□□□□□ -0.33
CKAP5-208ENST00000527333 DIEXFQ68CQ4 756 aaKnown RBP12.98□□□□□ -0.33
CKAP5-208ENST00000527333 SPATA31D1Q6ZQQ2 1576 aa12.97□□□□□ -0.33
CKAP5-208ENST00000527333 CFAP65Q6ZU64 1925 aaKnown RBP12.97□□□□□ -0.33
CKAP5-208ENST00000527333 ERVK-7P63135 1459 aa12.97□□□□□ -0.33
CKAP5-208ENST00000527333 ZMYM3Q14202 1370 aa12.96□□□□□ -0.33
CKAP5-208ENST00000527333 C3P01024 1663 aa12.96□□□□□ -0.33
CKAP5-208ENST00000527333 RIMS1Q86UR5 1692 aaKnown RBP12.96□□□□□ -0.33
CKAP5-208ENST00000527333 PCDHGA4Q9Y5G9 962 aa12.96□□□□□ -0.33
CKAP5-208ENST00000527333 SYNMO15061 1565 aa12.95□□□□□ -0.34
CKAP5-208ENST00000527333 NBPF8Q3BBV2 869 aa12.95□□□□□ -0.34
CKAP5-208ENST00000527333 OXER1Q8TDS5 423 aa12.95□□□□□ -0.34
CKAP5-208ENST00000527333 PIK3C2BO00750 1634 aa12.95□□□□□ -0.34
CKAP5-208ENST00000527333 ST18O60284 1047 aa12.94□□□□□ -0.34
CKAP5-208ENST00000527333 ARSIQ5FYB1 569 aa12.94□□□□□ -0.34
CKAP5-208ENST00000527333 CLTCL1P53675 1640 aa12.94□□□□□ -0.34
CKAP5-208ENST00000527333 CCDC144AA2RUR9 1427 aa12.94□□□□□ -0.34
CKAP5-208ENST00000527333 EMILIN3Q9NT22 766 aa12.93□□□□□ -0.34
CKAP5-208ENST00000527333 NEURL4Q96JN8 1562 aa12.93□□□□□ -0.34
CKAP5-208ENST00000527333 HOXB1P14653 301 aaPredicted RBP12.92□□□□□ -0.34
CKAP5-208ENST00000527333 GPR153Q6NV75 609 aa12.92□□□□□ -0.34
CKAP5-208ENST00000527333 KIF1BO60333 1816 aa12.91□□□□□ -0.34
CKAP5-208ENST00000527333 FBXO31Q5XUX0 539 aaPredicted RBP12.9□□□□□ -0.34
CKAP5-208ENST00000527333 SLC52A1Q9NWF4 448 aa12.9□□□□□ -0.34
CKAP5-208ENST00000527333 UGGT1Q9NYU2 1555 aa12.9□□□□□ -0.35
CKAP5-208ENST00000527333 UHRF1BP1Q6BDS2 1440 aa12.89□□□□□ -0.35
CKAP5-208ENST00000527333 DPYSL4O14531 572 aa12.89□□□□□ -0.35
CKAP5-208ENST00000527333 TNRQ92752 1358 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms