RNA–Protein interactions for RNA: ENST00000527133.2

CLNS1A-207, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3

Gene CLNS1A, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-207ENST00000527133 PRAG1Q86YV5 1406 aa19.76■□□□□ 0.75
CLNS1A-207ENST00000527133 MYOM2P54296 1465 aa19.76■□□□□ 0.75
CLNS1A-207ENST00000527133 FOXD1Q16676 465 aa19.76■□□□□ 0.75
CLNS1A-207ENST00000527133 ESCO1Q5FWF5 840 aa19.75■□□□□ 0.75
CLNS1A-207ENST00000527133 NPHP3Q7Z494 1330 aa19.75■□□□□ 0.75
CLNS1A-207ENST00000527133 BCL9LQ86UU0 1499 aa19.73■□□□□ 0.75
CLNS1A-207ENST00000527133 XPCQ01831 940 aaPredicted RBP19.73■□□□□ 0.75
CLNS1A-207ENST00000527133 PXDNQ92626 1479 aa19.73■□□□□ 0.75
CLNS1A-207ENST00000527133 CDC42BPGQ6DT37 1551 aa19.72■□□□□ 0.75
CLNS1A-207ENST00000527133 RPGRIP1LQ68CZ1 1315 aa19.72■□□□□ 0.75
CLNS1A-207ENST00000527133 NAIPQ13075 1403 aa19.71■□□□□ 0.75
CLNS1A-207ENST00000527133 FOXO3O43524 673 aa19.71■□□□□ 0.75
CLNS1A-207ENST00000527133 CCDC125Q86Z20 511 aa19.7■□□□□ 0.74
CLNS1A-207ENST00000527133 GJD4Q96KN9 370 aaPredicted RBP19.7■□□□□ 0.74
CLNS1A-207ENST00000527133 MARF1Q9Y4F3 1742 aaKnown RBP19.69■□□□□ 0.74
CLNS1A-207ENST00000527133 PPLO60437 1756 aa19.69■□□□□ 0.74
CLNS1A-207ENST00000527133 NUTM2FA1L443 756 aa19.68■□□□□ 0.74
CLNS1A-207ENST00000527133 SLC4A1APQ9BWU0 796 aaKnown RBP19.66■□□□□ 0.74
CLNS1A-207ENST00000527133 STK26Q9P289 416 aa19.66■□□□□ 0.74
CLNS1A-207ENST00000527133 LRPPRCP42704 1394 aaKnown RBP19.66■□□□□ 0.74
CLNS1A-207ENST00000527133 WAPLQ7Z5K2 1190 aa19.65■□□□□ 0.74
CLNS1A-207ENST00000527133 RALGAPBQ86X10 1494 aa19.64■□□□□ 0.73
CLNS1A-207ENST00000527133 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.63■□□□□ 0.73
CLNS1A-207ENST00000527133 ADGRF5Q8IZF2 1346 aa19.63■□□□□ 0.73
CLNS1A-207ENST00000527133 UNC5CLQ8IV45 518 aa19.63■□□□□ 0.73
CLNS1A-207ENST00000527133 GLI3P10071 1580 aa19.62■□□□□ 0.73
CLNS1A-207ENST00000527133 RRBP1Q9P2E9 1410 aaKnown RBP19.62■□□□□ 0.73
CLNS1A-207ENST00000527133 SLIT2O94813 1529 aa19.61■□□□□ 0.73
CLNS1A-207ENST00000527133 BLMP54132 1417 aaPredicted RBP19.61■□□□□ 0.73
CLNS1A-207ENST00000527133 TECPR2O15040 1411 aa19.6■□□□□ 0.73
CLNS1A-207ENST00000527133 SPATA31A3Q5VYP0 1347 aa19.6■□□□□ 0.73
CLNS1A-207ENST00000527133 PLEKHH1Q9ULM0 1364 aa19.59■□□□□ 0.73
CLNS1A-207ENST00000527133 DEFB132Q7Z7B7 95 aa19.59■□□□□ 0.73
CLNS1A-207ENST00000527133 RGL3Q3MIN7 710 aa19.58■□□□□ 0.72
CLNS1A-207ENST00000527133 TMEM132EQ6IEE7 984 aa19.58■□□□□ 0.72
CLNS1A-207ENST00000527133 CCDC144AA2RUR9 1427 aa19.58■□□□□ 0.72
CLNS1A-207ENST00000527133 USP32Q8NFA0 1604 aa19.58■□□□□ 0.72
CLNS1A-207ENST00000527133 KRT28Q7Z3Y7 464 aa19.57■□□□□ 0.72
CLNS1A-207ENST00000527133 ABCC11Q96J66 1382 aa19.57■□□□□ 0.72
CLNS1A-207ENST00000527133 FMN2Q9NZ56 1722 aa19.56■□□□□ 0.72
CLNS1A-207ENST00000527133 KIF1AQ12756 1690 aa19.56■□□□□ 0.72
CLNS1A-207ENST00000527133 BRWD3Q6RI45 1802 aa19.56■□□□□ 0.72
CLNS1A-207ENST00000527133 PLEKHG5O94827 1062 aa19.56■□□□□ 0.72
CLNS1A-207ENST00000527133 HAP1P54257 671 aaPredicted RBP19.56■□□□□ 0.72
CLNS1A-207ENST00000527133 SF3B2Q13435 895 aaKnown RBP19.56■□□□□ 0.72
CLNS1A-207ENST00000527133 SEPT12Q8IYM1 358 aa19.55■□□□□ 0.72
CLNS1A-207ENST00000527133 KNDC1Q76NI1 1749 aa19.54■□□□□ 0.72
CLNS1A-207ENST00000527133 CABLES1Q8TDN4 633 aa19.54■□□□□ 0.72
CLNS1A-207ENST00000527133 ANKRD30BQ9BXX2 1392 aa19.54■□□□□ 0.72
CLNS1A-207ENST00000527133 CCDC9Q9Y3X0 531 aaKnown RBP19.53■□□□□ 0.72
CLNS1A-207ENST00000527133 TNS3Q68CZ2 1445 aa19.52■□□□□ 0.72
CLNS1A-207ENST00000527133 SPATA31E1Q6ZUB1 1445 aa19.52■□□□□ 0.72
CLNS1A-207ENST00000527133 VPS72Q15906 364 aa19.52■□□□□ 0.72
CLNS1A-207ENST00000527133 YTHDC2Q9H6S0 1430 aaKnown RBP19.51■□□□□ 0.71
CLNS1A-207ENST00000527133 IFT172Q9UG01 1749 aa19.51■□□□□ 0.71
CLNS1A-207ENST00000527133 PIK3C2GO75747 1445 aa19.51■□□□□ 0.71
CLNS1A-207ENST00000527133 PSME1Q06323 249 aa19.5■□□□□ 0.71
CLNS1A-207ENST00000527133 PHF8Q9UPP1 1060 aa19.5■□□□□ 0.71
CLNS1A-207ENST00000527133 PLCH1Q4KWH8 1693 aa19.49■□□□□ 0.71
CLNS1A-207ENST00000527133 LMOD2Q6P5Q4 547 aa19.49■□□□□ 0.71
CLNS1A-207ENST00000527133 KRT27Q7Z3Y8 459 aa19.49■□□□□ 0.71
CLNS1A-207ENST00000527133 RGPD8O14715 1765 aaPredicted RBP19.48■□□□□ 0.71
CLNS1A-207ENST00000527133 NWD2Q9ULI1 1742 aa19.48■□□□□ 0.71
CLNS1A-207ENST00000527133 A0A0G2JS52 829 aa19.47■□□□□ 0.71
CLNS1A-207ENST00000527133 ONECUT3O60422 494 aaPredicted RBP19.47■□□□□ 0.71
CLNS1A-207ENST00000527133 MYT1Q01538 1121 aa19.47■□□□□ 0.71
CLNS1A-207ENST00000527133 LRP5O75197 1615 aa19.46■□□□□ 0.71
CLNS1A-207ENST00000527133 SBNO1A3KN83 1393 aa19.45■□□□□ 0.7
CLNS1A-207ENST00000527133 ABCA3Q99758 1704 aa19.45■□□□□ 0.7
CLNS1A-207ENST00000527133 PSDA5PKW4 1024 aaPredicted RBP19.45■□□□□ 0.7
CLNS1A-207ENST00000527133 SIRT1Q96EB6 747 aa19.45■□□□□ 0.7
CLNS1A-207ENST00000527133 NRXN1Q9ULB1 1477 aa19.45■□□□□ 0.7
CLNS1A-207ENST00000527133 ARHGEF10O15013 1369 aa19.44■□□□□ 0.7
CLNS1A-207ENST00000527133 FAM83GA6ND36 823 aa19.44■□□□□ 0.7
CLNS1A-207ENST00000527133 SAFB2Q14151 953 aaKnown RBP eCLIP19.44■□□□□ 0.7
CLNS1A-207ENST00000527133 MPHOSPH9Q99550 1183 aa19.43■□□□□ 0.7
CLNS1A-207ENST00000527133 BAG6P46379 1132 aa19.42■□□□□ 0.7
CLNS1A-207ENST00000527133 FAM98CQ17RN3 349 aaKnown RBP19.42■□□□□ 0.7
CLNS1A-207ENST00000527133 PMFBP1Q8TBY8 1022 aa19.42■□□□□ 0.7
CLNS1A-207ENST00000527133 PRAM1Q96QH2 718 aa19.42■□□□□ 0.7
CLNS1A-207ENST00000527133 C14orf93Q9H972 538 aaKnown RBP19.42■□□□□ 0.7
CLNS1A-207ENST00000527133 CFAP70Q5T0N1 1121 aa19.41■□□□□ 0.7
CLNS1A-207ENST00000527133 DHX57Q6P158 1386 aaKnown RBP19.41■□□□□ 0.7
CLNS1A-207ENST00000527133 HRCP23327 699 aa19.39■□□□□ 0.69
CLNS1A-207ENST00000527133 BTG4Q9NY30 223 aa19.39■□□□□ 0.69
CLNS1A-207ENST00000527133 NRAPQ86VF7 1730 aa19.38■□□□□ 0.69
CLNS1A-207ENST00000527133 ANKARQ7Z5J8 1434 aa19.37■□□□□ 0.69
CLNS1A-207ENST00000527133 POGKQ9P215 609 aa19.37■□□□□ 0.69
CLNS1A-207ENST00000527133 EN1Q05925 392 aaPredicted RBP19.36■□□□□ 0.69
CLNS1A-207ENST00000527133 FAM182BQ5T319 152 aa19.36■□□□□ 0.69
CLNS1A-207ENST00000527133 TRPM3Q9HCF6 1732 aaPredicted RBP19.34■□□□□ 0.69
CLNS1A-207ENST00000527133 COL14A1Q05707 1796 aaKnown RBP19.34■□□□□ 0.69
CLNS1A-207ENST00000527133 HIRIP3Q9BW71 556 aaPredicted RBP19.33■□□□□ 0.68
CLNS1A-207ENST00000527133 RGPD1P0DJD0 1748 aa19.33■□□□□ 0.68
CLNS1A-207ENST00000527133 GPRASP1Q5JY77 1395 aa19.32■□□□□ 0.68
CLNS1A-207ENST00000527133 DLC1Q96QB1 1528 aa19.32■□□□□ 0.68
CLNS1A-207ENST00000527133 R3HDM1Q15032 1099 aaKnown RBP19.32■□□□□ 0.68
CLNS1A-207ENST00000527133 ADGRB2O60241 1585 aa19.32■□□□□ 0.68
CLNS1A-207ENST00000527133 SPATA31A5Q5VU36 1347 aa19.31■□□□□ 0.68
CLNS1A-207ENST00000527133 SPATA31A7Q8IWB4 1347 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms