RNA–Protein interactions for RNA: ENST00000526988.1

BEST1-205, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,263 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-205ENST00000526988 SPATA31A6Q5VVP1 1343 aa23.68■■□□□ 1.38
BEST1-205ENST00000526988 MEX3CQ5U5Q3 659 aaKnown RBP23.68■■□□□ 1.38
BEST1-205ENST00000526988 NUTM2FA1L443 756 aa23.67■■□□□ 1.38
BEST1-205ENST00000526988 LRRC59Q96AG4 307 aaKnown RBP23.67■■□□□ 1.38
BEST1-205ENST00000526988 NUTM2BA6NNL0 878 aaPredicted RBP23.66■■□□□ 1.38
BEST1-205ENST00000526988 NUTM2EB1AL46 878 aaPredicted RBP23.66■■□□□ 1.38
BEST1-205ENST00000526988 ESCO1Q5FWF5 840 aa23.66■■□□□ 1.38
BEST1-205ENST00000526988 NUTM2AQ8IVF1 878 aaPredicted RBP23.66■■□□□ 1.38
BEST1-205ENST00000526988 SIRT1Q96EB6 747 aa23.66■■□□□ 1.38
BEST1-205ENST00000526988 SAFB2Q14151 953 aaKnown RBP eCLIP23.64■■□□□ 1.37
BEST1-205ENST00000526988 STAC3Q96MF2 364 aa23.64■■□□□ 1.37
BEST1-205ENST00000526988 PRAM1Q96QH2 718 aa23.63■■□□□ 1.37
BEST1-205ENST00000526988 POGKQ9P215 609 aa23.63■■□□□ 1.37
BEST1-205ENST00000526988 POTEAQ6S8J7 498 aa23.61■■□□□ 1.37
BEST1-205ENST00000526988 LAMC1P11047 1609 aa23.61■■□□□ 1.37
BEST1-205ENST00000526988 CDC42BPGQ6DT37 1551 aa23.61■■□□□ 1.37
BEST1-205ENST00000526988 NHSL1Q5SYE7 1610 aa23.6■■□□□ 1.37
BEST1-205ENST00000526988 KNDC1Q76NI1 1749 aa23.6■■□□□ 1.37
BEST1-205ENST00000526988 TRAK1Q9UPV9 953 aa23.6■■□□□ 1.37
BEST1-205ENST00000526988 LRP6O75581 1613 aa23.59■■□□□ 1.37
BEST1-205ENST00000526988 SOS2Q07890 1332 aaPredicted RBP23.58■■□□□ 1.36
BEST1-205ENST00000526988 SHPRHQ149N8 1683 aa23.57■■□□□ 1.36
BEST1-205ENST00000526988 FOXO3O43524 673 aa23.57■■□□□ 1.36
BEST1-205ENST00000526988 PNPLA6Q8IY17 1366 aa23.56■■□□□ 1.36
BEST1-205ENST00000526988 NPHP3Q7Z494 1330 aa23.56■■□□□ 1.36
BEST1-205ENST00000526988 XPCQ01831 940 aaPredicted RBP23.54■■□□□ 1.36
BEST1-205ENST00000526988 ADGRB1O14514 1584 aa23.53■■□□□ 1.36
BEST1-205ENST00000526988 DLC1Q96QB1 1528 aa23.51■■□□□ 1.35
BEST1-205ENST00000526988 ZNF772Q68DY9 489 aaPredicted RBP23.51■■□□□ 1.35
BEST1-205ENST00000526988 HIRIP3Q9BW71 556 aaPredicted RBP23.51■■□□□ 1.35
BEST1-205ENST00000526988 MINK1Q8N4C8 1332 aaPredicted RBP23.5■■□□□ 1.35
BEST1-205ENST00000526988 ADAMTS2O95450 1211 aa23.49■■□□□ 1.35
BEST1-205ENST00000526988 C8orf37Q96NL8 207 aa23.49■■□□□ 1.35
BEST1-205ENST00000526988 SIN3AQ96ST3 1273 aa23.49■■□□□ 1.35
BEST1-205ENST00000526988 NEUROD1Q13562 356 aa23.48■■□□□ 1.35
BEST1-205ENST00000526988 PHF8Q9UPP1 1060 aa23.48■■□□□ 1.35
BEST1-205ENST00000526988 FMN2Q9NZ56 1722 aa23.47■■□□□ 1.35
BEST1-205ENST00000526988 AFF2P51816 1311 aa23.46■■□□□ 1.35
BEST1-205ENST00000526988 PXDNQ92626 1479 aa23.45■■□□□ 1.34
BEST1-205ENST00000526988 KRT28Q7Z3Y7 464 aa23.45■■□□□ 1.34
BEST1-205ENST00000526988 L3MBTL2Q969R5 705 aa23.44■■□□□ 1.34
BEST1-205ENST00000526988 NGLY1Q96IV0 654 aa23.44■■□□□ 1.34
BEST1-205ENST00000526988 TRIM26Q12899 539 aaPredicted RBP23.43■■□□□ 1.34
BEST1-205ENST00000526988 NBPF1Q3BBV0 1214 aa23.43■■□□□ 1.34
BEST1-205ENST00000526988 PMFBP1Q8TBY8 1022 aa23.42■■□□□ 1.34
BEST1-205ENST00000526988 WASLO00401 505 aaPredicted RBP23.41■■□□□ 1.34
BEST1-205ENST00000526988 PSME1Q06323 249 aa23.41■■□□□ 1.34
BEST1-205ENST00000526988 ANKARQ7Z5J8 1434 aa23.4■■□□□ 1.34
BEST1-205ENST00000526988 RXRBP28702 533 aa23.39■■□□□ 1.33
BEST1-205ENST00000526988 EIF3AQ14152 1382 aaKnown RBP23.39■■□□□ 1.33
BEST1-205ENST00000526988 SPATA31A3Q5VYP0 1347 aa23.38■■□□□ 1.33
BEST1-205ENST00000526988 KIF1AQ12756 1690 aa23.38■■□□□ 1.33
BEST1-205ENST00000526988 LMOD2Q6P5Q4 547 aa23.37■■□□□ 1.33
BEST1-205ENST00000526988 QTRT2Q9H974 415 aaKnown RBP23.37■■□□□ 1.33
BEST1-205ENST00000526988 PRR36Q9H6K5 1346 aa23.36■■□□□ 1.33
BEST1-205ENST00000526988 ADGRB2O60241 1585 aa23.36■■□□□ 1.33
BEST1-205ENST00000526988 PLEKHG5O94827 1062 aa23.36■■□□□ 1.33
BEST1-205ENST00000526988 USP21Q9UK80 565 aa23.34■■□□□ 1.33
BEST1-205ENST00000526988 RGPD8O14715 1765 aaPredicted RBP23.34■■□□□ 1.33
BEST1-205ENST00000526988 HAP1P54257 671 aaPredicted RBP23.33■■□□□ 1.33
BEST1-205ENST00000526988 CDK19Q9BWU1 502 aa23.33■■□□□ 1.33
BEST1-205ENST00000526988 COL22A1Q8NFW1 1626 aaPredicted RBP23.33■■□□□ 1.32
BEST1-205ENST00000526988 NGDNQ8NEJ9 315 aaKnown RBP23.32■■□□□ 1.32
BEST1-205ENST00000526988 NUDT16Q96DE0 195 aaKnown RBP23.32■■□□□ 1.32
BEST1-205ENST00000526988 KIAA1210Q9ULL0 1709 aa23.32■■□□□ 1.32
BEST1-205ENST00000526988 TULP4Q9NRJ4 1543 aa23.32■■□□□ 1.32
BEST1-205ENST00000526988 ARHGEF28Q8N1W1 1705 aaKnown RBP23.31■■□□□ 1.32
BEST1-205ENST00000526988 USP32Q8NFA0 1604 aa23.31■■□□□ 1.32
BEST1-205ENST00000526988 SBNO1A3KN83 1393 aa23.3■■□□□ 1.32
BEST1-205ENST00000526988 GPRASP1Q5JY77 1395 aa23.3■■□□□ 1.32
BEST1-205ENST00000526988 RBM6P78332 1123 aaKnown RBP23.3■■□□□ 1.32
BEST1-205ENST00000526988 FNBP4Q8N3X1 1017 aaPredicted RBP23.3■■□□□ 1.32
BEST1-205ENST00000526988 TNS3Q68CZ2 1445 aa23.3■■□□□ 1.32
BEST1-205ENST00000526988 CABLES1Q8TDN4 633 aa23.29■■□□□ 1.32
BEST1-205ENST00000526988 CENPJQ9HC77 1338 aaPredicted RBP23.29■■□□□ 1.32
BEST1-205ENST00000526988 TRPC5Q9UL62 973 aaPredicted RBP23.27■■□□□ 1.32
BEST1-205ENST00000526988 ARHGEF10O15013 1369 aa23.27■■□□□ 1.31
BEST1-205ENST00000526988 PAK3O75914 559 aaPredicted RBP23.26■■□□□ 1.31
BEST1-205ENST00000526988 SRPK2P78362 688 aaKnown RBP23.24■■□□□ 1.31
BEST1-205ENST00000526988 ROCK2O75116 1388 aaKnown RBP23.24■■□□□ 1.31
BEST1-205ENST00000526988 CCDC61Q9Y6R9 512 aa23.23■■□□□ 1.31
BEST1-205ENST00000526988 ATP7BP35670 1465 aa23.23■■□□□ 1.31
BEST1-205ENST00000526988 NBPF8Q3BBV2 869 aa23.22■■□□□ 1.31
BEST1-205ENST00000526988 TONSLQ96HA7 1378 aa23.21■■□□□ 1.31
BEST1-205ENST00000526988 CDK12Q9NYV4 1490 aaPredicted RBP23.21■■□□□ 1.31
BEST1-205ENST00000526988 CABP2Q9NPB3 220 aa23.2■■□□□ 1.3
BEST1-205ENST00000526988 ACEP12821 1306 aa23.19■■□□□ 1.3
BEST1-205ENST00000526988 BCL9LQ86UU0 1499 aa23.18■■□□□ 1.3
BEST1-205ENST00000526988 ATRNO75882 1429 aa23.18■■□□□ 1.3
BEST1-205ENST00000526988 UNC5CLQ8IV45 518 aa23.18■■□□□ 1.3
BEST1-205ENST00000526988 RGS12O14924 1447 aa23.17■■□□□ 1.3
BEST1-205ENST00000526988 PLEKHG3A1L390 1219 aa23.17■■□□□ 1.3
BEST1-205ENST00000526988 TRPM1Q7Z4N2 1603 aa23.16■■□□□ 1.3
BEST1-205ENST00000526988 GJD4Q96KN9 370 aaPredicted RBP23.15■■□□□ 1.3
BEST1-205ENST00000526988 EVC2Q86UK5 1308 aa23.14■■□□□ 1.3
BEST1-205ENST00000526988 FAM83GA6ND36 823 aa23.14■■□□□ 1.29
BEST1-205ENST00000526988 TRPM3Q9HCF6 1732 aaPredicted RBP23.13■■□□□ 1.29
BEST1-205ENST00000526988 NUTM2GQ5VZR2 741 aa23.13■■□□□ 1.29
BEST1-205ENST00000526988 UPF1Q92900 1129 aaKnown RBP eCLIP23.13■■□□□ 1.29
BEST1-205ENST00000526988 CARD11Q9BXL7 1154 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms