RNA–Protein interactions for RNA: ENST00000526971.1

PKP3-204, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 532 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-204ENST00000526971 CDC42BPGQ6DT37 1551 aa28.23■■■□□ 2.11
PKP3-204ENST00000526971 ADAMTS2O95450 1211 aa28.21■■■□□ 2.11
PKP3-204ENST00000526971 QTRT2Q9H974 415 aaKnown RBP28.2■■■□□ 2.1
PKP3-204ENST00000526971 RBM6P78332 1123 aaKnown RBP28.18■■■□□ 2.1
PKP3-204ENST00000526971 ADGRF5Q8IZF2 1346 aa28.17■■■□□ 2.1
PKP3-204ENST00000526971 KNDC1Q76NI1 1749 aa28.16■■■□□ 2.1
PKP3-204ENST00000526971 SPATA31E1Q6ZUB1 1445 aa28.16■■■□□ 2.1
PKP3-204ENST00000526971 PXDNQ92626 1479 aa28.15■■■□□ 2.1
PKP3-204ENST00000526971 MARF1Q9Y4F3 1742 aaKnown RBP28.15■■■□□ 2.1
PKP3-204ENST00000526971 NGLY1Q96IV0 654 aa28.15■■■□□ 2.1
PKP3-204ENST00000526971 MYOM2P54296 1465 aa28.14■■■□□ 2.09
PKP3-204ENST00000526971 TECPR2O15040 1411 aa28.13■■■□□ 2.09
PKP3-204ENST00000526971 CCDC144AA2RUR9 1427 aa28.12■■■□□ 2.09
PKP3-204ENST00000526971 FMN2Q9NZ56 1722 aa28.09■■■□□ 2.09
PKP3-204ENST00000526971 USP21Q9UK80 565 aa28.08■■■□□ 2.09
PKP3-204ENST00000526971 PLEKHH1Q9ULM0 1364 aa28.08■■■□□ 2.09
PKP3-204ENST00000526971 ATRNO75882 1429 aa28.08■■■□□ 2.09
PKP3-204ENST00000526971 RGL3Q3MIN7 710 aa28.07■■■□□ 2.08
PKP3-204ENST00000526971 ESCO1Q5FWF5 840 aa28.07■■■□□ 2.08
PKP3-204ENST00000526971 LRPPRCP42704 1394 aaKnown RBP28.07■■■□□ 2.08
PKP3-204ENST00000526971 XPCQ01831 940 aaPredicted RBP28.06■■■□□ 2.08
PKP3-204ENST00000526971 WAPLQ7Z5K2 1190 aa28.06■■■□□ 2.08
PKP3-204ENST00000526971 FNBP4Q8N3X1 1017 aaPredicted RBP28.06■■■□□ 2.08
PKP3-204ENST00000526971 STK26Q9P289 416 aa28.06■■■□□ 2.08
PKP3-204ENST00000526971 NPHP3Q7Z494 1330 aa28.06■■■□□ 2.08
PKP3-204ENST00000526971 PIK3C2GO75747 1445 aa28.06■■■□□ 2.08
PKP3-204ENST00000526971 ANKRD30BQ9BXX2 1392 aa28.04■■■□□ 2.08
PKP3-204ENST00000526971 TRPC5Q9UL62 973 aaPredicted RBP28.03■■■□□ 2.08
PKP3-204ENST00000526971 RGPD8O14715 1765 aaPredicted RBP28.03■■■□□ 2.08
PKP3-204ENST00000526971 EP400Q96L91 3159 aa28.03■■■□□ 2.08
PKP3-204ENST00000526971 NUTM2FA1L443 756 aa28.02■■■□□ 2.08
PKP3-204ENST00000526971 FOXO3O43524 673 aa28.02■■■□□ 2.08
PKP3-204ENST00000526971 TMEM132EQ6IEE7 984 aa28.02■■■□□ 2.08
PKP3-204ENST00000526971 BCL9LQ86UU0 1499 aa28.02■■■□□ 2.08
PKP3-204ENST00000526971 ABCC11Q96J66 1382 aa28.01■■■□□ 2.07
PKP3-204ENST00000526971 KIF1AQ12756 1690 aa28■■■□□ 2.07
PKP3-204ENST00000526971 ATAD2Q6PL18 1390 aa27.99■■■□□ 2.07
PKP3-204ENST00000526971 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.99■■■□□ 2.07
PKP3-204ENST00000526971 YTHDC2Q9H6S0 1430 aaKnown RBP27.99■■■□□ 2.07
PKP3-204ENST00000526971 TRIM26Q12899 539 aaPredicted RBP27.97■■■□□ 2.07
PKP3-204ENST00000526971 NRXN1Q9ULB1 1477 aa27.94■■■□□ 2.06
PKP3-204ENST00000526971 USP32Q8NFA0 1604 aa27.93■■■□□ 2.06
PKP3-204ENST00000526971 SRCAPQ6ZRS2 3230 aa27.92■■■□□ 2.06
PKP3-204ENST00000526971 GLI3P10071 1580 aa27.92■■■□□ 2.06
PKP3-204ENST00000526971 ABCA3Q99758 1704 aa27.9■■■□□ 2.06
PKP3-204ENST00000526971 SPATA31A3Q5VYP0 1347 aa27.9■■■□□ 2.06
PKP3-204ENST00000526971 SLIT2O94813 1529 aa27.89■■■□□ 2.06
PKP3-204ENST00000526971 BRWD3Q6RI45 1802 aa27.88■■■□□ 2.05
PKP3-204ENST00000526971 C14orf93Q9H972 538 aaKnown RBP27.87■■■□□ 2.05
PKP3-204ENST00000526971 GJD4Q96KN9 370 aaPredicted RBP27.86■■■□□ 2.05
PKP3-204ENST00000526971 PLCH1Q4KWH8 1693 aa27.85■■■□□ 2.05
PKP3-204ENST00000526971 RALGAPBQ86X10 1494 aa27.85■■■□□ 2.05
PKP3-204ENST00000526971 CFAP70Q5T0N1 1121 aa27.84■■■□□ 2.05
PKP3-204ENST00000526971 SIRT1Q96EB6 747 aa27.84■■■□□ 2.05
PKP3-204ENST00000526971 TNS3Q68CZ2 1445 aa27.84■■■□□ 2.05
PKP3-204ENST00000526971 KRT28Q7Z3Y7 464 aa27.83■■■□□ 2.05
PKP3-204ENST00000526971 UNC5CLQ8IV45 518 aa27.81■■■□□ 2.04
PKP3-204ENST00000526971 PHF8Q9UPP1 1060 aa27.8■■■□□ 2.04
PKP3-204ENST00000526971 DLC1Q96QB1 1528 aa27.8■■■□□ 2.04
PKP3-204ENST00000526971 NWD2Q9ULI1 1742 aa27.8■■■□□ 2.04
PKP3-204ENST00000526971 ADGRB1O14514 1584 aa27.79■■■□□ 2.04
PKP3-204ENST00000526971 ADGRB2O60241 1585 aa27.79■■■□□ 2.04
PKP3-204ENST00000526971 DHX57Q6P158 1386 aaKnown RBP27.79■■■□□ 2.04
PKP3-204ENST00000526971 SAFB2Q14151 953 aaKnown RBP eCLIP27.78■■■□□ 2.04
PKP3-204ENST00000526971 PRAM1Q96QH2 718 aa27.78■■■□□ 2.04
PKP3-204ENST00000526971 CABLES1Q8TDN4 633 aa27.77■■■□□ 2.04
PKP3-204ENST00000526971 TRPM3Q9HCF6 1732 aaPredicted RBP27.77■■■□□ 2.04
PKP3-204ENST00000526971 SBNO1A3KN83 1393 aa27.74■■■□□ 2.03
PKP3-204ENST00000526971 NRAPQ86VF7 1730 aa27.73■■■□□ 2.03
PKP3-204ENST00000526971 PLEKHG5O94827 1062 aa27.73■■■□□ 2.03
PKP3-204ENST00000526971 ANKARQ7Z5J8 1434 aa27.72■■■□□ 2.03
PKP3-204ENST00000526971 ALS2Q96Q42 1657 aa27.72■■■□□ 2.03
PKP3-204ENST00000526971 DCAF11Q8TEB1 546 aa27.71■■■□□ 2.03
PKP3-204ENST00000526971 PSME1Q06323 249 aa27.7■■■□□ 2.02
PKP3-204ENST00000526971 CCDC125Q86Z20 511 aa27.7■■■□□ 2.02
PKP3-204ENST00000526971 STAC3Q96MF2 364 aa27.7■■■□□ 2.02
PKP3-204ENST00000526971 KDM2AQ9Y2K7 1162 aa27.69■■■□□ 2.02
PKP3-204ENST00000526971 BLMP54132 1417 aaPredicted RBP27.68■■■□□ 2.02
PKP3-204ENST00000526971 HAP1P54257 671 aaPredicted RBP27.68■■■□□ 2.02
PKP3-204ENST00000526971 PMFBP1Q8TBY8 1022 aa27.68■■■□□ 2.02
PKP3-204ENST00000526971 ZRANB1Q9UGI0 708 aa27.68■■■□□ 2.02
PKP3-204ENST00000526971 ARHGEF10O15013 1369 aa27.68■■■□□ 2.02
PKP3-204ENST00000526971 CRYBG1Q9Y4K1 1723 aa27.67■■■□□ 2.02
PKP3-204ENST00000526971 VPS72Q15906 364 aa27.67■■■□□ 2.02
PKP3-204ENST00000526971 LMOD2Q6P5Q4 547 aa27.66■■■□□ 2.02
PKP3-204ENST00000526971 POGKQ9P215 609 aa27.66■■■□□ 2.02
PKP3-204ENST00000526971 SEPT12Q8IYM1 358 aa27.65■■■□□ 2.02
PKP3-204ENST00000526971 PRR36Q9H6K5 1346 aa27.65■■■□□ 2.02
PKP3-204ENST00000526971 TULP4Q9NRJ4 1543 aa27.64■■■□□ 2.02
PKP3-204ENST00000526971 HIRIP3Q9BW71 556 aaPredicted RBP27.64■■■□□ 2.02
PKP3-204ENST00000526971 TRAK1Q9UPV9 953 aa27.63■■■□□ 2.01
PKP3-204ENST00000526971 ARHGEF28Q8N1W1 1705 aaKnown RBP27.62■■■□□ 2.01
PKP3-204ENST00000526971 FAM83GA6ND36 823 aa27.62■■■□□ 2.01
PKP3-204ENST00000526971 DEFB132Q7Z7B7 95 aa27.61■■■□□ 2.01
PKP3-204ENST00000526971 SIN3AQ96ST3 1273 aa27.61■■■□□ 2.01
PKP3-204ENST00000526971 MINK1Q8N4C8 1332 aaPredicted RBP27.61■■■□□ 2.01
PKP3-204ENST00000526971 COL14A1Q05707 1796 aaKnown RBP27.6■■■□□ 2.01
PKP3-204ENST00000526971 ONECUT3O60422 494 aaPredicted RBP27.6■■■□□ 2.01
PKP3-204ENST00000526971 CCDC9Q9Y3X0 531 aaKnown RBP27.59■■■□□ 2.01
PKP3-204ENST00000526971 ITSN1Q15811 1721 aa27.56■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms