RNA–Protein interactions for RNA: ENST00000526877.1

SSSCA1-203, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-203ENST00000526877 STK26Q9P289 416 aa18.18■□□□□ 0.5
SSSCA1-203ENST00000526877 MYOM2P54296 1465 aa18.18■□□□□ 0.5
SSSCA1-203ENST00000526877 CFAP70Q5T0N1 1121 aa18.17■□□□□ 0.5
SSSCA1-203ENST00000526877 WAPLQ7Z5K2 1190 aa18.17■□□□□ 0.5
SSSCA1-203ENST00000526877 SHPRHQ149N8 1683 aa18.17■□□□□ 0.5
SSSCA1-203ENST00000526877 DDX17Q92841 729 aaKnown RBP18.16■□□□□ 0.5
SSSCA1-203ENST00000526877 ORAI2Q96SN7 254 aa18.16■□□□□ 0.5
SSSCA1-203ENST00000526877 SPATA31A6Q5VVP1 1343 aa18.16■□□□□ 0.5
SSSCA1-203ENST00000526877 YTHDC2Q9H6S0 1430 aaKnown RBP18.15■□□□□ 0.5
SSSCA1-203ENST00000526877 KNDC1Q76NI1 1749 aa18.15■□□□□ 0.5
SSSCA1-203ENST00000526877 SIRT1Q96EB6 747 aa18.15■□□□□ 0.5
SSSCA1-203ENST00000526877 LRP6O75581 1613 aa18.14■□□□□ 0.49
SSSCA1-203ENST00000526877 LAMC1P11047 1609 aa18.14■□□□□ 0.49
SSSCA1-203ENST00000526877 POTEAQ6S8J7 498 aa18.14■□□□□ 0.49
SSSCA1-203ENST00000526877 PLEKHH1Q9ULM0 1364 aa18.14■□□□□ 0.49
SSSCA1-203ENST00000526877 CDC42BPGQ6DT37 1551 aa18.13■□□□□ 0.49
SSSCA1-203ENST00000526877 LRRC59Q96AG4 307 aaKnown RBP18.12■□□□□ 0.49
SSSCA1-203ENST00000526877 L3MBTL2Q969R5 705 aa18.11■□□□□ 0.49
SSSCA1-203ENST00000526877 DCAF11Q8TEB1 546 aa18.1■□□□□ 0.49
SSSCA1-203ENST00000526877 SOS2Q07890 1332 aaPredicted RBP18.09■□□□□ 0.49
SSSCA1-203ENST00000526877 STAC3Q96MF2 364 aa18.09■□□□□ 0.49
SSSCA1-203ENST00000526877 KDM2AQ9Y2K7 1162 aa18.09■□□□□ 0.49
SSSCA1-203ENST00000526877 ADGRB1O14514 1584 aa18.08■□□□□ 0.48
SSSCA1-203ENST00000526877 PNPLA6Q8IY17 1366 aa18.07■□□□□ 0.48
SSSCA1-203ENST00000526877 NUTM2BA6NNL0 878 aaPredicted RBP18.06■□□□□ 0.48
SSSCA1-203ENST00000526877 NUTM2EB1AL46 878 aaPredicted RBP18.06■□□□□ 0.48
SSSCA1-203ENST00000526877 ESCO1Q5FWF5 840 aa18.06■□□□□ 0.48
SSSCA1-203ENST00000526877 NUTM2AQ8IVF1 878 aaPredicted RBP18.06■□□□□ 0.48
SSSCA1-203ENST00000526877 FMN2Q9NZ56 1722 aa18.05■□□□□ 0.48
SSSCA1-203ENST00000526877 DLC1Q96QB1 1528 aa18.04■□□□□ 0.48
SSSCA1-203ENST00000526877 NUTM2FA1L443 756 aa18.04■□□□□ 0.48
SSSCA1-203ENST00000526877 PRAM1Q96QH2 718 aa18.04■□□□□ 0.48
SSSCA1-203ENST00000526877 MEX3CQ5U5Q3 659 aaKnown RBP18.03■□□□□ 0.48
SSSCA1-203ENST00000526877 FOXO3O43524 673 aa18.02■□□□□ 0.48
SSSCA1-203ENST00000526877 RGPD8O14715 1765 aaPredicted RBP18.02■□□□□ 0.47
SSSCA1-203ENST00000526877 PXDNQ92626 1479 aa18.01■□□□□ 0.47
SSSCA1-203ENST00000526877 NPHP3Q7Z494 1330 aa18.01■□□□□ 0.47
SSSCA1-203ENST00000526877 SAFB2Q14151 953 aaKnown RBP eCLIP18■□□□□ 0.47
SSSCA1-203ENST00000526877 ZNF772Q68DY9 489 aaPredicted RBP18■□□□□ 0.47
SSSCA1-203ENST00000526877 TRAK1Q9UPV9 953 aa18■□□□□ 0.47
SSSCA1-203ENST00000526877 XPCQ01831 940 aaPredicted RBP17.98■□□□□ 0.47
SSSCA1-203ENST00000526877 POGKQ9P215 609 aa17.98■□□□□ 0.47
SSSCA1-203ENST00000526877 COL22A1Q8NFW1 1626 aaPredicted RBP17.98■□□□□ 0.47
SSSCA1-203ENST00000526877 AFF2P51816 1311 aa17.97■□□□□ 0.47
SSSCA1-203ENST00000526877 KIF1AQ12756 1690 aa17.96■□□□□ 0.47
SSSCA1-203ENST00000526877 ADGRB2O60241 1585 aa17.96■□□□□ 0.46
SSSCA1-203ENST00000526877 NBPF8Q3BBV2 869 aa17.95■□□□□ 0.46
SSSCA1-203ENST00000526877 USP32Q8NFA0 1604 aa17.94■□□□□ 0.46
SSSCA1-203ENST00000526877 C8orf37Q96NL8 207 aa17.94■□□□□ 0.46
SSSCA1-203ENST00000526877 PHF8Q9UPP1 1060 aa17.94■□□□□ 0.46
SSSCA1-203ENST00000526877 KIAA1210Q9ULL0 1709 aa17.93■□□□□ 0.46
SSSCA1-203ENST00000526877 ADAMTS2O95450 1211 aa17.93■□□□□ 0.46
SSSCA1-203ENST00000526877 KRT28Q7Z3Y7 464 aa17.93■□□□□ 0.46
SSSCA1-203ENST00000526877 HIRIP3Q9BW71 556 aaPredicted RBP17.93■□□□□ 0.46
SSSCA1-203ENST00000526877 SPATA31A3Q5VYP0 1347 aa17.93■□□□□ 0.46
SSSCA1-203ENST00000526877 ANKARQ7Z5J8 1434 aa17.92■□□□□ 0.46
SSSCA1-203ENST00000526877 MINK1Q8N4C8 1332 aaPredicted RBP17.92■□□□□ 0.46
SSSCA1-203ENST00000526877 ARHGEF28Q8N1W1 1705 aaKnown RBP17.92■□□□□ 0.46
SSSCA1-203ENST00000526877 RXRBP28702 533 aa17.91■□□□□ 0.46
SSSCA1-203ENST00000526877 NBPF1Q3BBV0 1214 aa17.91■□□□□ 0.46
SSSCA1-203ENST00000526877 NGLY1Q96IV0 654 aa17.91■□□□□ 0.46
SSSCA1-203ENST00000526877 WASLO00401 505 aaPredicted RBP17.9■□□□□ 0.46
SSSCA1-203ENST00000526877 PRR36Q9H6K5 1346 aa17.9■□□□□ 0.46
SSSCA1-203ENST00000526877 FNBP4Q8N3X1 1017 aaPredicted RBP17.89■□□□□ 0.45
SSSCA1-203ENST00000526877 QTRT2Q9H974 415 aaKnown RBP17.89■□□□□ 0.45
SSSCA1-203ENST00000526877 PMFBP1Q8TBY8 1022 aa17.88■□□□□ 0.45
SSSCA1-203ENST00000526877 RALGAPBQ86X10 1494 aa17.88■□□□□ 0.45
SSSCA1-203ENST00000526877 TRPM1Q7Z4N2 1603 aa17.87■□□□□ 0.45
SSSCA1-203ENST00000526877 MARF1Q9Y4F3 1742 aaKnown RBP17.87■□□□□ 0.45
SSSCA1-203ENST00000526877 PSME1Q06323 249 aa17.87■□□□□ 0.45
SSSCA1-203ENST00000526877 SBNO1A3KN83 1393 aa17.86■□□□□ 0.45
SSSCA1-203ENST00000526877 CDK12Q9NYV4 1490 aaPredicted RBP17.86■□□□□ 0.45
SSSCA1-203ENST00000526877 TULP4Q9NRJ4 1543 aa17.86■□□□□ 0.45
SSSCA1-203ENST00000526877 ZNF316A6NFI3 1004 aaPredicted RBP17.85■□□□□ 0.45
SSSCA1-203ENST00000526877 RBM6P78332 1123 aaKnown RBP17.85■□□□□ 0.45
SSSCA1-203ENST00000526877 TNS3Q68CZ2 1445 aa17.84■□□□□ 0.45
SSSCA1-203ENST00000526877 EIF3AQ14152 1382 aaKnown RBP17.84■□□□□ 0.45
SSSCA1-203ENST00000526877 USP21Q9UK80 565 aa17.84■□□□□ 0.45
SSSCA1-203ENST00000526877 ROCK2O75116 1388 aaKnown RBP17.83■□□□□ 0.45
SSSCA1-203ENST00000526877 EIF4G2P78344 907 aaKnown RBP eCLIP17.83■□□□□ 0.44
SSSCA1-203ENST00000526877 BCL9LQ86UU0 1499 aa17.82■□□□□ 0.44
SSSCA1-203ENST00000526877 TRPM3Q9HCF6 1732 aaPredicted RBP17.82■□□□□ 0.44
SSSCA1-203ENST00000526877 CDK19Q9BWU1 502 aa17.82■□□□□ 0.44
SSSCA1-203ENST00000526877 CARD11Q9BXL7 1154 aa17.82■□□□□ 0.44
SSSCA1-203ENST00000526877 CABLES1Q8TDN4 633 aa17.81■□□□□ 0.44
SSSCA1-203ENST00000526877 NUDT16Q96DE0 195 aaKnown RBP17.81■□□□□ 0.44
SSSCA1-203ENST00000526877 ATP7BP35670 1465 aa17.81■□□□□ 0.44
SSSCA1-203ENST00000526877 ATRNO75882 1429 aa17.81■□□□□ 0.44
SSSCA1-203ENST00000526877 TRPC5Q9UL62 973 aaPredicted RBP17.8■□□□□ 0.44
SSSCA1-203ENST00000526877 RGS12O14924 1447 aa17.8■□□□□ 0.44
SSSCA1-203ENST00000526877 ARHGEF10O15013 1369 aa17.79■□□□□ 0.44
SSSCA1-203ENST00000526877 GPRASP1Q5JY77 1395 aa17.79■□□□□ 0.44
SSSCA1-203ENST00000526877 SLIT2O94813 1529 aa17.78■□□□□ 0.44
SSSCA1-203ENST00000526877 ALS2Q96Q42 1657 aa17.78■□□□□ 0.44
SSSCA1-203ENST00000526877 UPF1Q92900 1129 aaKnown RBP eCLIP17.78■□□□□ 0.44
SSSCA1-203ENST00000526877 ABCA3Q99758 1704 aa17.78■□□□□ 0.44
SSSCA1-203ENST00000526877 HSPA5P11021 654 aaKnown RBP17.77■□□□□ 0.44
SSSCA1-203ENST00000526877 LMOD2Q6P5Q4 547 aa17.77■□□□□ 0.44
SSSCA1-203ENST00000526877 NGDNQ8NEJ9 315 aaKnown RBP17.77■□□□□ 0.44
SSSCA1-203ENST00000526877 ITSN1Q15811 1721 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms