RNA–Protein interactions for RNA: ENST00000526789.1

COMMD9-204, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-204ENST00000526789 SLIT1O75093 1534 aa11.3□□□□□ -0.6
COMMD9-204ENST00000526789 CHGAP10645 457 aaKnown RBP11.29□□□□□ -0.6
COMMD9-204ENST00000526789 PYGBP11216 843 aa11.29□□□□□ -0.6
COMMD9-204ENST00000526789 ARHGAP23Q9P227 1491 aa11.29□□□□□ -0.6
COMMD9-204ENST00000526789 PIK3C2BO00750 1634 aa11.28□□□□□ -0.6
COMMD9-204ENST00000526789 RIOK3O14730 519 aaKnown RBP11.28□□□□□ -0.6
COMMD9-204ENST00000526789 MAP3K1Q13233 1512 aa11.28□□□□□ -0.6
COMMD9-204ENST00000526789 LRP6O75581 1613 aa11.27□□□□□ -0.6
COMMD9-204ENST00000526789 PRDM15P57071 1507 aaPredicted RBP11.27□□□□□ -0.61
COMMD9-204ENST00000526789 CHRM1P11229 460 aaPredicted RBP11.27□□□□□ -0.61
COMMD9-204ENST00000526789 ATF3P18847 181 aa11.27□□□□□ -0.61
COMMD9-204ENST00000526789 MMRN1Q13201 1228 aa11.27□□□□□ -0.61
COMMD9-204ENST00000526789 KANK1Q14678 1352 aa11.27□□□□□ -0.61
COMMD9-204ENST00000526789 EFCAB6Q5THR3 1501 aa11.26□□□□□ -0.61
COMMD9-204ENST00000526789 C8orf37Q96NL8 207 aa11.26□□□□□ -0.61
COMMD9-204ENST00000526789 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.26□□□□□ -0.61
COMMD9-204ENST00000526789 AFF2P51816 1311 aa11.26□□□□□ -0.61
COMMD9-204ENST00000526789 NKTRP30414 1462 aaKnown RBP11.25□□□□□ -0.61
COMMD9-204ENST00000526789 ARHGEF5Q12774 1597 aa11.25□□□□□ -0.61
COMMD9-204ENST00000526789 EIF2AK4Q9P2K8 1649 aaKnown RBP11.25□□□□□ -0.61
COMMD9-204ENST00000526789 IDI1Q13907 227 aa11.25□□□□□ -0.61
COMMD9-204ENST00000526789 RRP7BPQ9NSQ0 103 aa11.25□□□□□ -0.61
COMMD9-204ENST00000526789 COL16A1Q07092 1604 aaPredicted RBP11.24□□□□□ -0.61
COMMD9-204ENST00000526789 FGD6Q6ZV73 1430 aa11.24□□□□□ -0.61
COMMD9-204ENST00000526789 CADPS2Q86UW7 1296 aa11.23□□□□□ -0.61
COMMD9-204ENST00000526789 HS6ST3Q8IZP7 471 aa11.23□□□□□ -0.61
COMMD9-204ENST00000526789 QTRT2Q9H974 415 aaKnown RBP11.23□□□□□ -0.61
COMMD9-204ENST00000526789 BMP2KQ9NSY1 1161 aaPredicted RBP11.23□□□□□ -0.61
COMMD9-204ENST00000526789 HDGFP51858 240 aaKnown RBP11.22□□□□□ -0.61
COMMD9-204ENST00000526789 MROH1Q8NDA8 1641 aa11.22□□□□□ -0.61
COMMD9-204ENST00000526789 DUOX2Q9NRD8 1548 aa11.21□□□□□ -0.61
COMMD9-204ENST00000526789 KIF15Q9NS87 1388 aa11.21□□□□□ -0.61
COMMD9-204ENST00000526789 ST18O60284 1047 aa11.21□□□□□ -0.61
COMMD9-204ENST00000526789 HAP1P54257 671 aaPredicted RBP11.21□□□□□ -0.61
COMMD9-204ENST00000526789 RBM6P78332 1123 aaKnown RBP11.21□□□□□ -0.61
COMMD9-204ENST00000526789 SPNS2Q8IVW8 549 aa11.21□□□□□ -0.61
COMMD9-204ENST00000526789 KDM5AP29375 1690 aaKnown RBP11.2□□□□□ -0.62
COMMD9-204ENST00000526789 VGFO15240 615 aaPredicted RBP11.2□□□□□ -0.62
COMMD9-204ENST00000526789 PAXIP1Q6ZW49 1069 aaPredicted RBP11.2□□□□□ -0.62
COMMD9-204ENST00000526789 NGLY1Q96IV0 654 aa11.2□□□□□ -0.62
COMMD9-204ENST00000526789 TAOK2Q9UL54 1235 aa11.2□□□□□ -0.62
COMMD9-204ENST00000526789 COLQQ9Y215 455 aaPredicted RBP11.2□□□□□ -0.62
COMMD9-204ENST00000526789 SHPRHQ149N8 1683 aa11.2□□□□□ -0.62
COMMD9-204ENST00000526789 CDK12Q9NYV4 1490 aaPredicted RBP11.19□□□□□ -0.62
COMMD9-204ENST00000526789 ARHGAP31Q2M1Z3 1444 aa11.19□□□□□ -0.62
COMMD9-204ENST00000526789 ADAMTS2O95450 1211 aa11.19□□□□□ -0.62
COMMD9-204ENST00000526789 C19orf44Q9H6X5 657 aa11.19□□□□□ -0.62
COMMD9-204ENST00000526789 TRPC6Q9Y210 931 aa11.19□□□□□ -0.62
COMMD9-204ENST00000526789 CCDC61Q9Y6R9 512 aa11.19□□□□□ -0.62
COMMD9-204ENST00000526789 TET3O43151 1660 aa11.19□□□□□ -0.62
COMMD9-204ENST00000526789 NWD1Q149M9 1564 aa11.19□□□□□ -0.62
COMMD9-204ENST00000526789 MAST1Q9Y2H9 1570 aa11.19□□□□□ -0.62
COMMD9-204ENST00000526789 RGS12O14924 1447 aa11.18□□□□□ -0.62
COMMD9-204ENST00000526789 ATAD2Q6PL18 1390 aa11.18□□□□□ -0.62
COMMD9-204ENST00000526789 SEC24BO95487 1268 aa11.18□□□□□ -0.62
COMMD9-204ENST00000526789 CFAP44Q96MT7 982 aa11.18□□□□□ -0.62
COMMD9-204ENST00000526789 CHD2O14647 1828 aaKnown RBP11.16□□□□□ -0.62
COMMD9-204ENST00000526789 ADGRB3O60242 1522 aa11.16□□□□□ -0.62
COMMD9-204ENST00000526789 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.16□□□□□ -0.62
COMMD9-204ENST00000526789 BRINP3Q76B58 766 aa11.16□□□□□ -0.62
COMMD9-204ENST00000526789 KIF12Q96FN5 646 aa11.16□□□□□ -0.62
COMMD9-204ENST00000526789 CHIC2Q9UKJ5 165 aa11.16□□□□□ -0.62
COMMD9-204ENST00000526789 MYOM3Q5VTT5 1437 aa11.16□□□□□ -0.62
COMMD9-204ENST00000526789 AHDC1Q5TGY3 1603 aaPredicted RBP11.16□□□□□ -0.62
COMMD9-204ENST00000526789 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.15□□□□□ -0.62
COMMD9-204ENST00000526789 STK25O00506 426 aa11.15□□□□□ -0.62
COMMD9-204ENST00000526789 LRRC59Q96AG4 307 aaKnown RBP11.15□□□□□ -0.62
COMMD9-204ENST00000526789 ZFP91Q96JP5 570 aaPredicted RBP11.15□□□□□ -0.62
COMMD9-204ENST00000526789 SLC52A1Q9NWF4 448 aa11.15□□□□□ -0.62
COMMD9-204ENST00000526789 ERBINQ96RT1 1412 aa11.15□□□□□ -0.62
COMMD9-204ENST00000526789 RIMS2Q9UQ26 1411 aa11.15□□□□□ -0.62
COMMD9-204ENST00000526789 PLEKHG1Q9ULL1 1385 aa11.15□□□□□ -0.63
COMMD9-204ENST00000526789 SPRYD3Q8NCJ5 442 aa11.13□□□□□ -0.63
COMMD9-204ENST00000526789 SLAIN1Q8ND83 568 aa11.13□□□□□ -0.63
COMMD9-204ENST00000526789 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.13□□□□□ -0.63
COMMD9-204ENST00000526789 DDX17Q92841 729 aaKnown RBP11.13□□□□□ -0.63
COMMD9-204ENST00000526789 SGIP1Q9BQI5 828 aa11.13□□□□□ -0.63
COMMD9-204ENST00000526789 USP21Q9UK80 565 aa11.13□□□□□ -0.63
COMMD9-204ENST00000526789 TBX22Q9Y458 520 aa11.13□□□□□ -0.63
COMMD9-204ENST00000526789 MYO5BQ9ULV0 1848 aa11.13□□□□□ -0.63
COMMD9-204ENST00000526789 TIE1P35590 1138 aa11.12□□□□□ -0.63
COMMD9-204ENST00000526789 ZNF467Q7Z7K2 595 aaPredicted RBP11.12□□□□□ -0.63
COMMD9-204ENST00000526789 AMOTL2Q9Y2J4 779 aa11.12□□□□□ -0.63
COMMD9-204ENST00000526789 SETBP1Q9Y6X0 1596 aa11.11□□□□□ -0.63
COMMD9-204ENST00000526789 NCOA3Q9Y6Q9 1424 aa11.11□□□□□ -0.63
COMMD9-204ENST00000526789 TRPC5Q9UL62 973 aaPredicted RBP11.11□□□□□ -0.63
COMMD9-204ENST00000526789 GCC2Q8IWJ2 1684 aa11.11□□□□□ -0.63
COMMD9-204ENST00000526789 BCL11BQ9C0K0 894 aaPredicted RBP11.1□□□□□ -0.63
COMMD9-204ENST00000526789 PCDHB8Q9UN66 801 aa11.1□□□□□ -0.63
COMMD9-204ENST00000526789 PCDHB13Q9Y5F0 798 aa11.1□□□□□ -0.63
COMMD9-204ENST00000526789 STK24Q9Y6E0 443 aa11.1□□□□□ -0.63
COMMD9-204ENST00000526789 ASXL1Q8IXJ9 1541 aa11.09□□□□□ -0.63
COMMD9-204ENST00000526789 DIP2AQ14689 1571 aa11.09□□□□□ -0.63
COMMD9-204ENST00000526789 ANKRD30AQ9BXX3 1397 aa11.09□□□□□ -0.63
COMMD9-204ENST00000526789 SF3B2Q13435 895 aaKnown RBP11.09□□□□□ -0.63
COMMD9-204ENST00000526789 NKX1-1Q15270 411 aaPredicted RBP11.09□□□□□ -0.63
COMMD9-204ENST00000526789 MAP3K13O43283 966 aa11.08□□□□□ -0.64
COMMD9-204ENST00000526789 KANK4Q5T7N3 995 aaPredicted RBP11.08□□□□□ -0.64
COMMD9-204ENST00000526789 NOS1P29475 1434 aa11.08□□□□□ -0.64
COMMD9-204ENST00000526789 SETD5Q9C0A6 1442 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms