RNA–Protein interactions for RNA: ENST00000526506.5

HIF3A-210, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-210ENST00000526506 CDC42BPGQ6DT37 1551 aa21.7■■□□□ 1.06
HIF3A-210ENST00000526506 KIAA1210Q9ULL0 1709 aa21.69■■□□□ 1.06
HIF3A-210ENST00000526506 PRAM1Q96QH2 718 aa21.68■■□□□ 1.06
HIF3A-210ENST00000526506 TRAK1Q9UPV9 953 aa21.68■■□□□ 1.06
HIF3A-210ENST00000526506 BRINP3Q76B58 766 aa21.67■■□□□ 1.06
HIF3A-210ENST00000526506 POGKQ9P215 609 aa21.67■■□□□ 1.06
HIF3A-210ENST00000526506 TONSLQ96HA7 1378 aa21.66■■□□□ 1.06
HIF3A-210ENST00000526506 C1orf167Q5SNV9 1468 aa21.65■■□□□ 1.06
HIF3A-210ENST00000526506 SAFB2Q14151 953 aaKnown RBP eCLIP21.64■■□□□ 1.05
HIF3A-210ENST00000526506 NBPF1Q3BBV0 1214 aa21.63■■□□□ 1.05
HIF3A-210ENST00000526506 PHLPP1O60346 1717 aa21.63■■□□□ 1.05
HIF3A-210ENST00000526506 AHDC1Q5TGY3 1603 aaPredicted RBP21.62■■□□□ 1.05
HIF3A-210ENST00000526506 ARHGEF28Q8N1W1 1705 aaKnown RBP21.59■■□□□ 1.05
HIF3A-210ENST00000526506 COL16A1Q07092 1604 aaPredicted RBP21.58■■□□□ 1.05
HIF3A-210ENST00000526506 CLSPNQ9HAW4 1339 aa21.58■■□□□ 1.05
HIF3A-210ENST00000526506 ADGRB2O60241 1585 aa21.58■■□□□ 1.05
HIF3A-210ENST00000526506 ORAI2Q96SN7 254 aa21.58■■□□□ 1.05
HIF3A-210ENST00000526506 TRPM1Q7Z4N2 1603 aa21.58■■□□□ 1.04
HIF3A-210ENST00000526506 FMN2Q9NZ56 1722 aa21.58■■□□□ 1.04
HIF3A-210ENST00000526506 NHSL1Q5SYE7 1610 aa21.56■■□□□ 1.04
HIF3A-210ENST00000526506 NUTM2FA1L443 756 aa21.56■■□□□ 1.04
HIF3A-210ENST00000526506 ESCO1Q5FWF5 840 aa21.56■■□□□ 1.04
HIF3A-210ENST00000526506 MINK1Q8N4C8 1332 aaPredicted RBP21.55■■□□□ 1.04
HIF3A-210ENST00000526506 NBPF8Q3BBV2 869 aa21.55■■□□□ 1.04
HIF3A-210ENST00000526506 ROCK2O75116 1388 aaKnown RBP21.55■■□□□ 1.04
HIF3A-210ENST00000526506 JCADQ9P266 1359 aa21.54■■□□□ 1.04
HIF3A-210ENST00000526506 HIRIP3Q9BW71 556 aaPredicted RBP21.54■■□□□ 1.04
HIF3A-210ENST00000526506 DDX17Q92841 729 aaKnown RBP21.52■■□□□ 1.04
HIF3A-210ENST00000526506 MED1Q15648 1581 aaPredicted RBP21.52■■□□□ 1.04
HIF3A-210ENST00000526506 EIF3AQ14152 1382 aaKnown RBP21.51■■□□□ 1.03
HIF3A-210ENST00000526506 ANKARQ7Z5J8 1434 aa21.51■■□□□ 1.03
HIF3A-210ENST00000526506 WASLO00401 505 aaPredicted RBP21.5■■□□□ 1.03
HIF3A-210ENST00000526506 CCER1Q8TC90 406 aaPredicted RBP21.5■■□□□ 1.03
HIF3A-210ENST00000526506 CENPJQ9HC77 1338 aaPredicted RBP21.5■■□□□ 1.03
HIF3A-210ENST00000526506 GPRASP1Q5JY77 1395 aa21.49■■□□□ 1.03
HIF3A-210ENST00000526506 NPHP3Q7Z494 1330 aa21.49■■□□□ 1.03
HIF3A-210ENST00000526506 RALGAPBQ86X10 1494 aa21.48■■□□□ 1.03
HIF3A-210ENST00000526506 LRRC59Q96AG4 307 aaKnown RBP21.48■■□□□ 1.03
HIF3A-210ENST00000526506 SOS2Q07890 1332 aaPredicted RBP21.48■■□□□ 1.03
HIF3A-210ENST00000526506 KIF1AQ12756 1690 aa21.47■■□□□ 1.03
HIF3A-210ENST00000526506 TULP4Q9NRJ4 1543 aa21.47■■□□□ 1.03
HIF3A-210ENST00000526506 FOXO3O43524 673 aa21.46■■□□□ 1.03
HIF3A-210ENST00000526506 TIMELESSQ9UNS1 1208 aa21.46■■□□□ 1.03
HIF3A-210ENST00000526506 USP32Q8NFA0 1604 aa21.46■■□□□ 1.03
HIF3A-210ENST00000526506 SHPRHQ149N8 1683 aa21.46■■□□□ 1.03
HIF3A-210ENST00000526506 CARD11Q9BXL7 1154 aa21.45■■□□□ 1.02
HIF3A-210ENST00000526506 PHF8Q9UPP1 1060 aa21.45■■□□□ 1.02
HIF3A-210ENST00000526506 SPATA31A6Q5VVP1 1343 aa21.45■■□□□ 1.02
HIF3A-210ENST00000526506 PRR36Q9H6K5 1346 aa21.43■■□□□ 1.02
HIF3A-210ENST00000526506 PXDNQ92626 1479 aa21.43■■□□□ 1.02
HIF3A-210ENST00000526506 QRICH2Q9H0J4 1663 aa21.43■■□□□ 1.02
HIF3A-210ENST00000526506 RGPD8O14715 1765 aaPredicted RBP21.43■■□□□ 1.02
HIF3A-210ENST00000526506 CDK19Q9BWU1 502 aa21.42■■□□□ 1.02
HIF3A-210ENST00000526506 PNPLA6Q8IY17 1366 aa21.41■■□□□ 1.02
HIF3A-210ENST00000526506 XPCQ01831 940 aaPredicted RBP21.41■■□□□ 1.02
HIF3A-210ENST00000526506 PHF23Q9BUL5 403 aaPredicted RBP21.41■■□□□ 1.02
HIF3A-210ENST00000526506 ATP7BP35670 1465 aa21.4■■□□□ 1.02
HIF3A-210ENST00000526506 PMFBP1Q8TBY8 1022 aa21.39■■□□□ 1.01
HIF3A-210ENST00000526506 NUDT16Q96DE0 195 aaKnown RBP21.39■■□□□ 1.01
HIF3A-210ENST00000526506 LRP6O75581 1613 aa21.37■■□□□ 1.01
HIF3A-210ENST00000526506 KRT28Q7Z3Y7 464 aa21.37■■□□□ 1.01
HIF3A-210ENST00000526506 ITSN1Q15811 1721 aa21.36■■□□□ 1.01
HIF3A-210ENST00000526506 SRPK2P78362 688 aaKnown RBP21.36■■□□□ 1.01
HIF3A-210ENST00000526506 PSME1Q06323 249 aa21.36■■□□□ 1.01
HIF3A-210ENST00000526506 NUTM2BA6NNL0 878 aaPredicted RBP21.35■■□□□ 1.01
HIF3A-210ENST00000526506 NUTM2EB1AL46 878 aaPredicted RBP21.35■■□□□ 1.01
HIF3A-210ENST00000526506 NUTM2AQ8IVF1 878 aaPredicted RBP21.35■■□□□ 1.01
HIF3A-210ENST00000526506 CCDC61Q9Y6R9 512 aa21.35■■□□□ 1.01
HIF3A-210ENST00000526506 EVC2Q86UK5 1308 aa21.34■■□□□ 1.01
HIF3A-210ENST00000526506 NGDNQ8NEJ9 315 aaKnown RBP21.34■■□□□ 1.01
HIF3A-210ENST00000526506 SPATA31A3Q5VYP0 1347 aa21.33■■□□□ 1.01
HIF3A-210ENST00000526506 MEX3CQ5U5Q3 659 aaKnown RBP21.33■■□□□ 1.01
HIF3A-210ENST00000526506 CABP2Q9NPB3 220 aa21.33■■□□□ 1.01
HIF3A-210ENST00000526506 SBNO2Q9Y2G9 1366 aa21.33■■□□□ 1
HIF3A-210ENST00000526506 TOPAZ1Q8N9V7 1692 aa21.32■■□□□ 1
HIF3A-210ENST00000526506 SBNO1A3KN83 1393 aa21.32■■□□□ 1
HIF3A-210ENST00000526506 COL22A1Q8NFW1 1626 aaPredicted RBP21.32■■□□□ 1
HIF3A-210ENST00000526506 TNS3Q68CZ2 1445 aa21.31■■□□□ 1
HIF3A-210ENST00000526506 PLEKHG3A1L390 1219 aa21.29■■□□□ 1
HIF3A-210ENST00000526506 PPIP5K1Q6PFW1 1433 aa21.29■■□□□ 1
HIF3A-210ENST00000526506 POLR3AO14802 1390 aaPredicted RBP21.28■■□□□ 1
HIF3A-210ENST00000526506 ARHGEF10O15013 1369 aa21.27■■□□□ 1
HIF3A-210ENST00000526506 RGS17Q9UGC6 210 aaPredicted RBP21.27■■□□□ 1
HIF3A-210ENST00000526506 ACEP12821 1306 aa21.27■□□□□ 0.99
HIF3A-210ENST00000526506 LMOD2Q6P5Q4 547 aa21.26■□□□□ 0.99
HIF3A-210ENST00000526506 TRPM3Q9HCF6 1732 aaPredicted RBP21.26■□□□□ 0.99
HIF3A-210ENST00000526506 USP47Q96K76 1375 aa21.25■□□□□ 0.99
HIF3A-210ENST00000526506 ST20-MTHFSA0A0A6YYL1 179 aa21.25■□□□□ 0.99
HIF3A-210ENST00000526506 ADAMTS2O95450 1211 aa21.25■□□□□ 0.99
HIF3A-210ENST00000526506 ATAD2Q6PL18 1390 aa21.24■□□□□ 0.99
HIF3A-210ENST00000526506 CABP1Q9NZU7 370 aa21.23■□□□□ 0.99
HIF3A-210ENST00000526506 SLC24A1O60721 1099 aa21.22■□□□□ 0.99
HIF3A-210ENST00000526506 PAK3O75914 559 aaPredicted RBP21.22■□□□□ 0.99
HIF3A-210ENST00000526506 C8orf37Q96NL8 207 aa21.22■□□□□ 0.99
HIF3A-210ENST00000526506 TESK2Q96S53 571 aa21.22■□□□□ 0.99
HIF3A-210ENST00000526506 ZNF772Q68DY9 489 aaPredicted RBP21.21■□□□□ 0.99
HIF3A-210ENST00000526506 ALS2Q96Q42 1657 aa21.21■□□□□ 0.99
HIF3A-210ENST00000526506 HAP1P54257 671 aaPredicted RBP21.2■□□□□ 0.98
HIF3A-210ENST00000526506 NGLY1Q96IV0 654 aa21.19■□□□□ 0.98
HIF3A-210ENST00000526506 AFF2P51816 1311 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms