RNA–Protein interactions for RNA: ENST00000526335.1

C11orf54-203, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 2

Gene C11orf54, Length 1,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-203ENST00000526335 H3BM21 787 aa12.18□□□□□ -0.46
C11orf54-203ENST00000526335 PAXIP1Q6ZW49 1069 aaPredicted RBP12.18□□□□□ -0.46
C11orf54-203ENST00000526335 RTN4Q9NQC3 1192 aaKnown RBP12.17□□□□□ -0.46
C11orf54-203ENST00000526335 SLC27A5Q9Y2P5 690 aa12.17□□□□□ -0.46
C11orf54-203ENST00000526335 FECHP22830 423 aa12.15□□□□□ -0.46
C11orf54-203ENST00000526335 MLLT3P42568 568 aaPredicted RBP12.15□□□□□ -0.46
C11orf54-203ENST00000526335 FUT2Q10981 343 aa12.15□□□□□ -0.46
C11orf54-203ENST00000526335 REPIN1Q9BWE0 567 aaKnown RBP12.15□□□□□ -0.46
C11orf54-203ENST00000526335 ATP6V1AP38606 617 aa12.13□□□□□ -0.47
C11orf54-203ENST00000526335 RDH13Q8NBN7 331 aa12.13□□□□□ -0.47
C11orf54-203ENST00000526335 NUTM2FA1L443 756 aa12.12□□□□□ -0.47
C11orf54-203ENST00000526335 BMP1P13497 986 aa12.12□□□□□ -0.47
C11orf54-203ENST00000526335 BRICD5Q6PL45 260 aa12.12□□□□□ -0.47
C11orf54-203ENST00000526335 PXYLP1Q8TE99 480 aa12.12□□□□□ -0.47
C11orf54-203ENST00000526335 OATP04181 439 aa12.1□□□□□ -0.47
C11orf54-203ENST00000526335 KCNMA1Q12791 1236 aa12.1□□□□□ -0.47
C11orf54-203ENST00000526335 SALL2Q9Y467 1007 aaPredicted RBP12.1□□□□□ -0.47
C11orf54-203ENST00000526335 MSS51Q4VC12 460 aa12.09□□□□□ -0.47
C11orf54-203ENST00000526335 TRIM46Q7Z4K8 759 aa12.08□□□□□ -0.48
C11orf54-203ENST00000526335 ALDH1A1P00352 501 aa12.07□□□□□ -0.48
C11orf54-203ENST00000526335 RC3H1Q5TC82 1133 aaKnown RBP12.07□□□□□ -0.48
C11orf54-203ENST00000526335 RNF19BQ6ZMZ0 732 aa12.05□□□□□ -0.48
C11orf54-203ENST00000526335 TMEM151AQ8N4L1 468 aa12.04□□□□□ -0.48
C11orf54-203ENST00000526335 DDX11L8A8MPP1 907 aa12.03□□□□□ -0.48
C11orf54-203ENST00000526335 CAPN5O15484 640 aaPredicted RBP12.03□□□□□ -0.48
C11orf54-203ENST00000526335 GSK3AP49840 483 aa12.03□□□□□ -0.48
C11orf54-203ENST00000526335 FCHSD2O94868 740 aa12.02□□□□□ -0.49
C11orf54-203ENST00000526335 SKOR1P84550 965 aa12.01□□□□□ -0.49
C11orf54-203ENST00000526335 METTL3Q86U44 580 aaKnown RBP12.01□□□□□ -0.49
C11orf54-203ENST00000526335 GDF11O95390 407 aa11.99□□□□□ -0.49
C11orf54-203ENST00000526335 MMP16P51512 607 aa11.99□□□□□ -0.49
C11orf54-203ENST00000526335 CCDC24Q8N4L8 307 aa11.99□□□□□ -0.49
C11orf54-203ENST00000526335 DAXXQ9UER7 740 aaPredicted RBP11.99□□□□□ -0.49
C11orf54-203ENST00000526335 GCGRP47871 477 aa11.98□□□□□ -0.49
C11orf54-203ENST00000526335 WNT7BP56706 349 aa11.98□□□□□ -0.49
C11orf54-203ENST00000526335 ZFP42Q96MM3 310 aa11.96□□□□□ -0.49
C11orf54-203ENST00000526335 RASSF7Q02833 373 aa11.95□□□□□ -0.5
C11orf54-203ENST00000526335 WASF2Q9Y6W5 498 aa11.95□□□□□ -0.5
C11orf54-203ENST00000526335 Q3C1V9 767 aa11.93□□□□□ -0.5
C11orf54-203ENST00000526335 GRIPAP1Q4V328 841 aa11.93□□□□□ -0.5
C11orf54-203ENST00000526335 VSIG8P0DPA2 414 aa11.92□□□□□ -0.5
C11orf54-203ENST00000526335 DXOO77932 396 aaKnown RBP11.91□□□□□ -0.5
C11orf54-203ENST00000526335 ARHGEF1Q92888 912 aaKnown RBP11.9□□□□□ -0.5
C11orf54-203ENST00000526335 SULF1Q8IWU6 871 aa11.89□□□□□ -0.51
C11orf54-203ENST00000526335 NLRP7Q8WX94 980 aa11.89□□□□□ -0.51
C11orf54-203ENST00000526335 USB1Q9BQ65 265 aaKnown RBP11.89□□□□□ -0.51
C11orf54-203ENST00000526335 EHBP1Q8NDI1 1231 aa11.88□□□□□ -0.51
C11orf54-203ENST00000526335 SIAH2O43255 324 aa11.87□□□□□ -0.51
C11orf54-203ENST00000526335 TSHZ2Q9NRE2 1034 aa11.87□□□□□ -0.51
C11orf54-203ENST00000526335 SOBPA7XYQ1 873 aa11.86□□□□□ -0.51
C11orf54-203ENST00000526335 RNF225M0QZC1 329 aaPredicted RBP11.85□□□□□ -0.51
C11orf54-203ENST00000526335 SCARF1Q14162 830 aa11.83□□□□□ -0.52
C11orf54-203ENST00000526335 HIC1Q14526 733 aa11.83□□□□□ -0.52
C11orf54-203ENST00000526335 XP32Q5T750 250 aa11.83□□□□□ -0.52
C11orf54-203ENST00000526335 GPAT2Q6NUI2 795 aa11.83□□□□□ -0.52
C11orf54-203ENST00000526335 MRPL14Q6P1L8 145 aaKnown RBP11.81□□□□□ -0.52
C11orf54-203ENST00000526335 PURBQ96QR8 312 aaKnown RBP11.81□□□□□ -0.52
C11orf54-203ENST00000526335 KCNV2Q8TDN2 545 aa11.8□□□□□ -0.52
C11orf54-203ENST00000526335 ADAMTS8Q9UP79 889 aa11.8□□□□□ -0.52
C11orf54-203ENST00000526335 IGHA1P01876 353 aa11.75□□□□□ -0.53
C11orf54-203ENST00000526335 MAN1A2O60476 641 aa11.73□□□□□ -0.53
C11orf54-203ENST00000526335 PPFIA3O75145 1194 aa11.73□□□□□ -0.53
C11orf54-203ENST00000526335 PTCRAQ6ISU1 281 aaPredicted RBP11.73□□□□□ -0.53
C11orf54-203ENST00000526335 DNMT3AQ9Y6K1 912 aaPredicted RBP11.73□□□□□ -0.53
C11orf54-203ENST00000526335 P3H3Q8IVL6 736 aa11.71□□□□□ -0.53
C11orf54-203ENST00000526335 TLL2Q9Y6L7 1015 aa11.71□□□□□ -0.53
C11orf54-203ENST00000526335 GNPATO15228 680 aa11.7□□□□□ -0.54
C11orf54-203ENST00000526335 JUNDP17535 347 aa11.7□□□□□ -0.54
C11orf54-203ENST00000526335 IRS1P35568 1242 aa11.7□□□□□ -0.54
C11orf54-203ENST00000526335 SH3BP2P78314 561 aa11.7□□□□□ -0.54
C11orf54-203ENST00000526335 NNTQ13423 1086 aa11.7□□□□□ -0.54
C11orf54-203ENST00000526335 PHOX2BQ99453 314 aa11.7□□□□□ -0.54
C11orf54-203ENST00000526335 CNTNAP3BQ96NU0 1288 aa11.69□□□□□ -0.54
C11orf54-203ENST00000526335 CNTNAP3Q9BZ76 1288 aa11.69□□□□□ -0.54
C11orf54-203ENST00000526335 HLA-CQ95604 372 aa11.68□□□□□ -0.54
C11orf54-203ENST00000526335 NUDT12Q9BQG2 462 aa11.68□□□□□ -0.54
C11orf54-203ENST00000526335 KDM4AO75164 1064 aa11.67□□□□□ -0.54
C11orf54-203ENST00000526335 WDR4P57081 412 aaKnown RBP11.67□□□□□ -0.54
C11orf54-203ENST00000526335 KRT76Q01546 638 aa11.67□□□□□ -0.54
C11orf54-203ENST00000526335 TIMP2P16035 220 aa11.67□□□□□ -0.54
C11orf54-203ENST00000526335 PLEKHG3A1L390 1219 aa11.66□□□□□ -0.54
C11orf54-203ENST00000526335 ADH1CP00326 375 aa11.65□□□□□ -0.55
C11orf54-203ENST00000526335 SEMA3EO15041 775 aa11.64□□□□□ -0.55
C11orf54-203ENST00000526335 FOXK2Q01167 660 aa11.64□□□□□ -0.55
C11orf54-203ENST00000526335 C6orf118Q5T5N4 469 aa11.64□□□□□ -0.55
C11orf54-203ENST00000526335 CD46P15529 392 aa11.63□□□□□ -0.55
C11orf54-203ENST00000526335 SVOPQ8N4V2 548 aa11.63□□□□□ -0.55
C11orf54-203ENST00000526335 GPR161Q8N6U8 529 aaKnown RBP11.63□□□□□ -0.55
C11orf54-203ENST00000526335 RBM26Q5T8P6 1007 aaKnown RBP11.62□□□□□ -0.55
C11orf54-203ENST00000526335 KRTAP4-8Q9BYQ9 185 aa11.62□□□□□ -0.55
C11orf54-203ENST00000526335 LINC01559Q495D7 138 aa11.61□□□□□ -0.55
C11orf54-203ENST00000526335 ZNF385CQ66K41 422 aaPredicted RBP11.61□□□□□ -0.55
C11orf54-203ENST00000526335 SYMPKQ92797 1274 aaKnown RBP11.61□□□□□ -0.55
C11orf54-203ENST00000526335 USP46P62068 366 aa11.59□□□□□ -0.55
C11orf54-203ENST00000526335 KANK3Q6NY19 840 aa11.58□□□□□ -0.56
C11orf54-203ENST00000526335 VARSP26640 1264 aaKnown RBP11.57□□□□□ -0.56
C11orf54-203ENST00000526335 MARSP56192 900 aaKnown RBP11.57□□□□□ -0.56
C11orf54-203ENST00000526335 GUCA2AQ02747 115 aa11.57□□□□□ -0.56
C11orf54-203ENST00000526335 BAP1Q92560 729 aa11.57□□□□□ -0.56
C11orf54-203ENST00000526335 KLF16Q9BXK1 252 aaPredicted RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms