RNA–Protein interactions for RNA: ENST00000526150.1

COLCA1-202, Transcript of colorectal cancer associated 1, humanhuman

TSL 2

Gene COLCA1, Length 391 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-202ENST00000526150 RGL3Q3MIN7 710 aa18.14■□□□□ 0.49
COLCA1-202ENST00000526150 ESCO1Q5FWF5 840 aa18.14■□□□□ 0.49
COLCA1-202ENST00000526150 MPHOSPH9Q99550 1183 aa18.14■□□□□ 0.49
COLCA1-202ENST00000526150 LRPPRCP42704 1394 aaKnown RBP18.14■□□□□ 0.49
COLCA1-202ENST00000526150 FOXD1Q16676 465 aa18.13■□□□□ 0.49
COLCA1-202ENST00000526150 ADGRF5Q8IZF2 1346 aa18.12■□□□□ 0.49
COLCA1-202ENST00000526150 CDC42BPGQ6DT37 1551 aa18.12■□□□□ 0.49
COLCA1-202ENST00000526150 USP21Q9UK80 565 aa18.11■□□□□ 0.49
COLCA1-202ENST00000526150 TRPC5Q9UL62 973 aaPredicted RBP18.11■□□□□ 0.49
COLCA1-202ENST00000526150 TECPR2O15040 1411 aa18.1■□□□□ 0.49
COLCA1-202ENST00000526150 ABCC11Q96J66 1382 aa18.1■□□□□ 0.49
COLCA1-202ENST00000526150 STK26Q9P289 416 aa18.1■□□□□ 0.49
COLCA1-202ENST00000526150 SPATA31E1Q6ZUB1 1445 aa18.08■□□□□ 0.49
COLCA1-202ENST00000526150 FNBP4Q8N3X1 1017 aaPredicted RBP18.08■□□□□ 0.48
COLCA1-202ENST00000526150 FOXO3O43524 673 aa18.07■□□□□ 0.48
COLCA1-202ENST00000526150 SIRT1Q96EB6 747 aa18.07■□□□□ 0.48
COLCA1-202ENST00000526150 RGS12O14924 1447 aa18.06■□□□□ 0.48
COLCA1-202ENST00000526150 COL22A1Q8NFW1 1626 aaPredicted RBP18.06■□□□□ 0.48
COLCA1-202ENST00000526150 WAPLQ7Z5K2 1190 aa18.06■□□□□ 0.48
COLCA1-202ENST00000526150 IFT172Q9UG01 1749 aa18.05■□□□□ 0.48
COLCA1-202ENST00000526150 PIK3C2GO75747 1445 aa18.05■□□□□ 0.48
COLCA1-202ENST00000526150 ATAD2Q6PL18 1390 aa18.04■□□□□ 0.48
COLCA1-202ENST00000526150 KNDC1Q76NI1 1749 aa18.04■□□□□ 0.48
COLCA1-202ENST00000526150 TMEM132EQ6IEE7 984 aa18.04■□□□□ 0.48
COLCA1-202ENST00000526150 PXDNQ92626 1479 aa18.03■□□□□ 0.48
COLCA1-202ENST00000526150 YTHDC2Q9H6S0 1430 aaKnown RBP18.03■□□□□ 0.48
COLCA1-202ENST00000526150 DHX57Q6P158 1386 aaKnown RBP18.03■□□□□ 0.48
COLCA1-202ENST00000526150 MYOM2P54296 1465 aa18.02■□□□□ 0.48
COLCA1-202ENST00000526150 NUTM2FA1L443 756 aa18.02■□□□□ 0.48
COLCA1-202ENST00000526150 PSME1Q06323 249 aa18.01■□□□□ 0.47
COLCA1-202ENST00000526150 C14orf93Q9H972 538 aaKnown RBP18.01■□□□□ 0.47
COLCA1-202ENST00000526150 ATRNO75882 1429 aa18■□□□□ 0.47
COLCA1-202ENST00000526150 XPCQ01831 940 aaPredicted RBP18■□□□□ 0.47
COLCA1-202ENST00000526150 KIF1AQ12756 1690 aa17.99■□□□□ 0.47
COLCA1-202ENST00000526150 SPATA31A3Q5VYP0 1347 aa17.98■□□□□ 0.47
COLCA1-202ENST00000526150 FMN2Q9NZ56 1722 aa17.98■□□□□ 0.47
COLCA1-202ENST00000526150 KRT28Q7Z3Y7 464 aa17.98■□□□□ 0.47
COLCA1-202ENST00000526150 CCDC125Q86Z20 511 aa17.98■□□□□ 0.47
COLCA1-202ENST00000526150 PLEKHH1Q9ULM0 1364 aa17.98■□□□□ 0.47
COLCA1-202ENST00000526150 MARF1Q9Y4F3 1742 aaKnown RBP17.98■□□□□ 0.47
COLCA1-202ENST00000526150 HAP1P54257 671 aaPredicted RBP17.97■□□□□ 0.47
COLCA1-202ENST00000526150 GJD4Q96KN9 370 aaPredicted RBP17.97■□□□□ 0.47
COLCA1-202ENST00000526150 PHF8Q9UPP1 1060 aa17.96■□□□□ 0.47
COLCA1-202ENST00000526150 BCL9LQ86UU0 1499 aa17.95■□□□□ 0.46
COLCA1-202ENST00000526150 CFAP70Q5T0N1 1121 aa17.95■□□□□ 0.46
COLCA1-202ENST00000526150 UNC5CLQ8IV45 518 aa17.95■□□□□ 0.46
COLCA1-202ENST00000526150 POGKQ9P215 609 aa17.95■□□□□ 0.46
COLCA1-202ENST00000526150 NRXN1Q9ULB1 1477 aa17.95■□□□□ 0.46
COLCA1-202ENST00000526150 STAC3Q96MF2 364 aa17.94■□□□□ 0.46
COLCA1-202ENST00000526150 PRAM1Q96QH2 718 aa17.93■□□□□ 0.46
COLCA1-202ENST00000526150 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.92■□□□□ 0.46
COLCA1-202ENST00000526150 ARHGEF10O15013 1369 aa17.91■□□□□ 0.46
COLCA1-202ENST00000526150 TNS3Q68CZ2 1445 aa17.91■□□□□ 0.46
COLCA1-202ENST00000526150 SBNO1A3KN83 1393 aa17.91■□□□□ 0.46
COLCA1-202ENST00000526150 DLC1Q96QB1 1528 aa17.9■□□□□ 0.46
COLCA1-202ENST00000526150 SAFB2Q14151 953 aaKnown RBP eCLIP17.9■□□□□ 0.46
COLCA1-202ENST00000526150 ZRANB1Q9UGI0 708 aa17.9■□□□□ 0.46
COLCA1-202ENST00000526150 EIF3AQ14152 1382 aaKnown RBP17.9■□□□□ 0.46
COLCA1-202ENST00000526150 RAB3GAP2Q9H2M9 1393 aa17.9■□□□□ 0.46
COLCA1-202ENST00000526150 ANKARQ7Z5J8 1434 aa17.89■□□□□ 0.46
COLCA1-202ENST00000526150 SLIT2O94813 1529 aa17.89■□□□□ 0.45
COLCA1-202ENST00000526150 LMOD2Q6P5Q4 547 aa17.89■□□□□ 0.45
COLCA1-202ENST00000526150 RGPD8O14715 1765 aaPredicted RBP17.88■□□□□ 0.45
COLCA1-202ENST00000526150 USP32Q8NFA0 1604 aa17.87■□□□□ 0.45
COLCA1-202ENST00000526150 GPRASP1Q5JY77 1395 aa17.86■□□□□ 0.45
COLCA1-202ENST00000526150 RALGAPBQ86X10 1494 aa17.86■□□□□ 0.45
COLCA1-202ENST00000526150 HRCP23327 699 aa17.85■□□□□ 0.45
COLCA1-202ENST00000526150 SF3B2Q13435 895 aaKnown RBP17.85■□□□□ 0.45
COLCA1-202ENST00000526150 VPS72Q15906 364 aa17.85■□□□□ 0.45
COLCA1-202ENST00000526150 PMFBP1Q8TBY8 1022 aa17.85■□□□□ 0.45
COLCA1-202ENST00000526150 DCAF11Q8TEB1 546 aa17.85■□□□□ 0.45
COLCA1-202ENST00000526150 TRAK1Q9UPV9 953 aa17.85■□□□□ 0.45
COLCA1-202ENST00000526150 KDM2AQ9Y2K7 1162 aa17.84■□□□□ 0.45
COLCA1-202ENST00000526150 CCDC9Q9Y3X0 531 aaKnown RBP17.84■□□□□ 0.45
COLCA1-202ENST00000526150 CABLES1Q8TDN4 633 aa17.83■□□□□ 0.44
COLCA1-202ENST00000526150 NWD2Q9ULI1 1742 aa17.83■□□□□ 0.44
COLCA1-202ENST00000526150 ADGRB2O60241 1585 aa17.83■□□□□ 0.44
COLCA1-202ENST00000526150 BLMP54132 1417 aaPredicted RBP17.81■□□□□ 0.44
COLCA1-202ENST00000526150 PLEKHG5O94827 1062 aa17.81■□□□□ 0.44
COLCA1-202ENST00000526150 SEPT12Q8IYM1 358 aa17.81■□□□□ 0.44
COLCA1-202ENST00000526150 GLI3P10071 1580 aa17.81■□□□□ 0.44
COLCA1-202ENST00000526150 MINK1Q8N4C8 1332 aaPredicted RBP17.8■□□□□ 0.44
COLCA1-202ENST00000526150 ADGRB1O14514 1584 aa17.8■□□□□ 0.44
COLCA1-202ENST00000526150 WASLO00401 505 aaPredicted RBP17.8■□□□□ 0.44
COLCA1-202ENST00000526150 ONECUT3O60422 494 aaPredicted RBP17.8■□□□□ 0.44
COLCA1-202ENST00000526150 NGDNQ8NEJ9 315 aaKnown RBP17.8■□□□□ 0.44
COLCA1-202ENST00000526150 HIRIP3Q9BW71 556 aaPredicted RBP17.8■□□□□ 0.44
COLCA1-202ENST00000526150 PLCH1Q4KWH8 1693 aa17.78■□□□□ 0.44
COLCA1-202ENST00000526150 FAM83GA6ND36 823 aa17.78■□□□□ 0.44
COLCA1-202ENST00000526150 KRT27Q7Z3Y8 459 aa17.78■□□□□ 0.44
COLCA1-202ENST00000526150 TULP4Q9NRJ4 1543 aa17.77■□□□□ 0.44
COLCA1-202ENST00000526150 A0A0G2JS52 829 aa17.77■□□□□ 0.44
COLCA1-202ENST00000526150 MYT1Q01538 1121 aa17.77■□□□□ 0.44
COLCA1-202ENST00000526150 ABCA3Q99758 1704 aa17.75■□□□□ 0.43
COLCA1-202ENST00000526150 PAK3O75914 559 aaPredicted RBP17.75■□□□□ 0.43
COLCA1-202ENST00000526150 BTG4Q9NY30 223 aa17.75■□□□□ 0.43
COLCA1-202ENST00000526150 EP400Q96L91 3159 aa17.75■□□□□ 0.43
COLCA1-202ENST00000526150 BRWD3Q6RI45 1802 aa17.75■□□□□ 0.43
COLCA1-202ENST00000526150 PRR36Q9H6K5 1346 aa17.73■□□□□ 0.43
COLCA1-202ENST00000526150 TRPM3Q9HCF6 1732 aaPredicted RBP17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms