RNA–Protein interactions for RNA: ENST00000525962.5

TGFBR3-207, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 3,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-207ENST00000525962 A0A0U1RQG5 324 aaPredicted RBP8.58□□□□□ -1.04
TGFBR3-207ENST00000525962 KIAA2012Q0VF49 1180 aa8.58□□□□□ -1.04
TGFBR3-207ENST00000525962 EFCAB5A4FU69 1503 aa8.58□□□□□ -1.04
TGFBR3-207ENST00000525962 KDM6BO15054 1643 aa8.58□□□□□ -1.04
TGFBR3-207ENST00000525962 ANO2Q9NQ90 1003 aa8.58□□□□□ -1.04
TGFBR3-207ENST00000525962 ADGRF5Q8IZF2 1346 aa8.58□□□□□ -1.04
TGFBR3-207ENST00000525962 CCDC27Q2M243 656 aa8.58□□□□□ -1.04
TGFBR3-207ENST00000525962 TSHZ3Q63HK5 1081 aa8.58□□□□□ -1.04
TGFBR3-207ENST00000525962 TNPO1Q92973 898 aaKnown RBP8.58□□□□□ -1.04
TGFBR3-207ENST00000525962 MIS18AQ9NYP9 233 aa8.58□□□□□ -1.04
TGFBR3-207ENST00000525962 EIF4G3O43432 1585 aaKnown RBP8.58□□□□□ -1.04
TGFBR3-207ENST00000525962 MRC2Q9UBG0 1479 aa8.57□□□□□ -1.04
TGFBR3-207ENST00000525962 TRIM27P14373 513 aa8.57□□□□□ -1.04
TGFBR3-207ENST00000525962 ATF7IPQ6VMQ6 1270 aa8.57□□□□□ -1.04
TGFBR3-207ENST00000525962 FBXW7Q969H0 707 aa8.57□□□□□ -1.04
TGFBR3-207ENST00000525962 MAP4K4O95819 1239 aaPredicted RBP8.57□□□□□ -1.04
TGFBR3-207ENST00000525962 XPCQ01831 940 aaPredicted RBP8.57□□□□□ -1.04
TGFBR3-207ENST00000525962 DDX54Q8TDD1 881 aaKnown RBP8.57□□□□□ -1.04
TGFBR3-207ENST00000525962 CHAMP1Q96JM3 812 aa8.57□□□□□ -1.04
TGFBR3-207ENST00000525962 GDPD2Q9HCC8 539 aa8.57□□□□□ -1.04
TGFBR3-207ENST00000525962 TROQ12816 1431 aaPredicted RBP8.57□□□□□ -1.04
TGFBR3-207ENST00000525962 TBC1D32Q96NH3 1257 aa8.56□□□□□ -1.04
TGFBR3-207ENST00000525962 TERF2IPQ9NYB0 399 aa8.56□□□□□ -1.04
TGFBR3-207ENST00000525962 RBM27Q9P2N5 1060 aaKnown RBP8.56□□□□□ -1.04
TGFBR3-207ENST00000525962 SHROOM2Q13796 1616 aa8.56□□□□□ -1.04
TGFBR3-207ENST00000525962 ST18O60284 1047 aa8.56□□□□□ -1.04
TGFBR3-207ENST00000525962 NEK4P51957 841 aa8.56□□□□□ -1.04
TGFBR3-207ENST00000525962 FOSBP53539 338 aa8.56□□□□□ -1.04
TGFBR3-207ENST00000525962 RSPH4AQ5TD94 716 aa8.56□□□□□ -1.04
TGFBR3-207ENST00000525962 CARD14Q9BXL6 1004 aa8.56□□□□□ -1.04
TGFBR3-207ENST00000525962 ZMYND15Q9H091 742 aa8.56□□□□□ -1.04
TGFBR3-207ENST00000525962 LRPPRCP42704 1394 aaKnown RBP8.56□□□□□ -1.04
TGFBR3-207ENST00000525962 CHAF1AQ13111 956 aaPredicted RBP8.56□□□□□ -1.04
TGFBR3-207ENST00000525962 ZRSR1Q15695 479 aaKnown RBP8.56□□□□□ -1.04
TGFBR3-207ENST00000525962 NUTM2GQ5VZR2 741 aa8.56□□□□□ -1.04
TGFBR3-207ENST00000525962 RTF1Q92541 710 aaKnown RBP8.56□□□□□ -1.04
TGFBR3-207ENST00000525962 CAMSAP2Q08AD1 1489 aa8.56□□□□□ -1.04
TGFBR3-207ENST00000525962 CHD1LQ86WJ1 897 aa8.55□□□□□ -1.04
TGFBR3-207ENST00000525962 CHMP4BQ9H444 224 aaKnown RBP8.55□□□□□ -1.04
TGFBR3-207ENST00000525962 KDM2BQ8NHM5 1336 aa8.55□□□□□ -1.04
TGFBR3-207ENST00000525962 PARD3Q8TEW0 1356 aa8.55□□□□□ -1.04
TGFBR3-207ENST00000525962 ABCA10Q8WWZ4 1543 aa8.55□□□□□ -1.04
TGFBR3-207ENST00000525962 ROCK1Q13464 1354 aa8.55□□□□□ -1.04
TGFBR3-207ENST00000525962 EIF2S2P20042 333 aaKnown RBP8.54□□□□□ -1.04
TGFBR3-207ENST00000525962 MCCP23508 829 aa8.54□□□□□ -1.04
TGFBR3-207ENST00000525962 EVC2Q86UK5 1308 aa8.54□□□□□ -1.04
TGFBR3-207ENST00000525962 RRS1Q15050 365 aaKnown RBP8.54□□□□□ -1.04
TGFBR3-207ENST00000525962 C16orf71Q8IYS4 520 aaPredicted RBP8.54□□□□□ -1.04
TGFBR3-207ENST00000525962 TMPOP42166 694 aaKnown RBP8.54□□□□□ -1.04
TGFBR3-207ENST00000525962 UPF3BQ9BZI7 483 aaKnown RBP8.54□□□□□ -1.04
TGFBR3-207ENST00000525962 CABP1Q9NZU7 370 aa8.54□□□□□ -1.04
TGFBR3-207ENST00000525962 SNAPC4Q5SXM2 1469 aa8.54□□□□□ -1.04
TGFBR3-207ENST00000525962 SYCE3A1L190 88 aa8.53□□□□□ -1.04
TGFBR3-207ENST00000525962 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.53□□□□□ -1.04
TGFBR3-207ENST00000525962 ZNF592Q92610 1267 aa8.53□□□□□ -1.04
TGFBR3-207ENST00000525962 SPATA31E1Q6ZUB1 1445 aa8.53□□□□□ -1.04
TGFBR3-207ENST00000525962 NSD3Q9BZ95 1437 aa8.53□□□□□ -1.04
TGFBR3-207ENST00000525962 GRIN2BQ13224 1484 aa8.53□□□□□ -1.04
TGFBR3-207ENST00000525962 FAM177BA6PVY3 158 aa8.53□□□□□ -1.04
TGFBR3-207ENST00000525962 NKTRP30414 1462 aaKnown RBP8.53□□□□□ -1.04
TGFBR3-207ENST00000525962 FAM83GA6ND36 823 aa8.53□□□□□ -1.04
TGFBR3-207ENST00000525962 CDK11BP21127 795 aaKnown RBP8.53□□□□□ -1.04
TGFBR3-207ENST00000525962 MAPK8IP2Q13387 824 aaPredicted RBP8.53□□□□□ -1.04
TGFBR3-207ENST00000525962 K7ELQ4 463 aaPredicted RBP8.52□□□□□ -1.04
TGFBR3-207ENST00000525962 SPC24Q8NBT2 197 aa8.52□□□□□ -1.04
TGFBR3-207ENST00000525962 PRAM1Q96QH2 718 aa8.52□□□□□ -1.04
TGFBR3-207ENST00000525962 MAGI3Q5TCQ9 1506 aa8.52□□□□□ -1.05
TGFBR3-207ENST00000525962 SKOR2Q2VWA4 1001 aaPredicted RBP8.52□□□□□ -1.05
TGFBR3-207ENST00000525962 TEX14Q8IWB6 1497 aa8.52□□□□□ -1.05
TGFBR3-207ENST00000525962 CHD1O14646 1710 aa8.52□□□□□ -1.05
TGFBR3-207ENST00000525962 VPS37CA5D8V6 355 aaPredicted RBP8.52□□□□□ -1.05
TGFBR3-207ENST00000525962 TWISTNBQ3B726 338 aaPredicted RBP8.52□□□□□ -1.05
TGFBR3-207ENST00000525962 ZNF830Q96NB3 372 aaPredicted RBP8.52□□□□□ -1.05
TGFBR3-207ENST00000525962 ZNF608Q9ULD9 1512 aaPredicted RBP8.52□□□□□ -1.05
TGFBR3-207ENST00000525962 UGGT2Q9NYU1 1516 aa8.51□□□□□ -1.05
TGFBR3-207ENST00000525962 CDC45O75419 566 aa8.51□□□□□ -1.05
TGFBR3-207ENST00000525962 NGEFQ8N5V2 710 aa8.51□□□□□ -1.05
TGFBR3-207ENST00000525962 EXOC6BQ9Y2D4 811 aa8.51□□□□□ -1.05
TGFBR3-207ENST00000525962 PLEKHH2Q8IVE3 1493 aa8.51□□□□□ -1.05
TGFBR3-207ENST00000525962 NPHP1O15259 732 aa8.51□□□□□ -1.05
TGFBR3-207ENST00000525962 FIBPO43427 364 aa8.51□□□□□ -1.05
TGFBR3-207ENST00000525962 FKBP5Q13451 457 aaPredicted RBP8.51□□□□□ -1.05
TGFBR3-207ENST00000525962 STK31Q9BXU1 1019 aa8.51□□□□□ -1.05
TGFBR3-207ENST00000525962 IL1RAPL2Q9NP60 686 aa8.51□□□□□ -1.05
TGFBR3-207ENST00000525962 GPRASP1Q5JY77 1395 aa8.51□□□□□ -1.05
TGFBR3-207ENST00000525962 PZPP20742 1482 aa8.51□□□□□ -1.05
TGFBR3-207ENST00000525962 ADAMTS12P58397 1594 aa8.5□□□□□ -1.05
TGFBR3-207ENST00000525962 KRT24Q2M2I5 525 aa8.5□□□□□ -1.05
TGFBR3-207ENST00000525962 TBC1D9Q6ZT07 1266 aa8.5□□□□□ -1.05
TGFBR3-207ENST00000525962 ATAD2Q6PL18 1390 aa8.5□□□□□ -1.05
TGFBR3-207ENST00000525962 KIF16BQ96L93 1317 aa8.5□□□□□ -1.05
TGFBR3-207ENST00000525962 F6X3S4 739 aa8.5□□□□□ -1.05
TGFBR3-207ENST00000525962 GAS2L2Q8NHY3 880 aa8.5□□□□□ -1.05
TGFBR3-207ENST00000525962 ARHGAP5Q13017 1502 aa8.5□□□□□ -1.05
TGFBR3-207ENST00000525962 SCAPERQ9BY12 1400 aa8.49□□□□□ -1.05
TGFBR3-207ENST00000525962 GPATCH8Q9UKJ3 1502 aaKnown RBP8.49□□□□□ -1.05
TGFBR3-207ENST00000525962 UQCRHLA0A096LP55 91 aa8.49□□□□□ -1.05
TGFBR3-207ENST00000525962 KDM4AO75164 1064 aa8.49□□□□□ -1.05
TGFBR3-207ENST00000525962 UQCRHP07919 91 aa8.49□□□□□ -1.05
TGFBR3-207ENST00000525962 MCM10Q7L590 875 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms