RNA–Protein interactions for RNA: ENST00000525874.1

SYVN1-205, Transcript of synoviolin 1, humanhuman

TSL 3

Gene SYVN1, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-205ENST00000525874 FNBP4Q8N3X1 1017 aaPredicted RBP16.7■□□□□ 0.26
SYVN1-205ENST00000525874 CDC42BPGQ6DT37 1551 aa16.69■□□□□ 0.26
SYVN1-205ENST00000525874 ATAD2Q6PL18 1390 aa16.69■□□□□ 0.26
SYVN1-205ENST00000525874 ESCO1Q5FWF5 840 aa16.68■□□□□ 0.26
SYVN1-205ENST00000525874 ATRNO75882 1429 aa16.68■□□□□ 0.26
SYVN1-205ENST00000525874 NPHP3Q7Z494 1330 aa16.68■□□□□ 0.26
SYVN1-205ENST00000525874 MYOM2P54296 1465 aa16.67■□□□□ 0.26
SYVN1-205ENST00000525874 PXDNQ92626 1479 aa16.66■□□□□ 0.26
SYVN1-205ENST00000525874 MARF1Q9Y4F3 1742 aaKnown RBP16.65■□□□□ 0.26
SYVN1-205ENST00000525874 FOXO3O43524 673 aa16.64■□□□□ 0.25
SYVN1-205ENST00000525874 FOXD1Q16676 465 aa16.64■□□□□ 0.25
SYVN1-205ENST00000525874 ADGRF5Q8IZF2 1346 aa16.64■□□□□ 0.25
SYVN1-205ENST00000525874 TECPR2O15040 1411 aa16.63■□□□□ 0.25
SYVN1-205ENST00000525874 BCL9LQ86UU0 1499 aa16.63■□□□□ 0.25
SYVN1-205ENST00000525874 XPCQ01831 940 aaPredicted RBP16.63■□□□□ 0.25
SYVN1-205ENST00000525874 WAPLQ7Z5K2 1190 aa16.62■□□□□ 0.25
SYVN1-205ENST00000525874 STK26Q9P289 416 aa16.62■□□□□ 0.25
SYVN1-205ENST00000525874 LRPPRCP42704 1394 aaKnown RBP16.62■□□□□ 0.25
SYVN1-205ENST00000525874 CCDC144AA2RUR9 1427 aa16.62■□□□□ 0.25
SYVN1-205ENST00000525874 NUTM2FA1L443 756 aa16.61■□□□□ 0.25
SYVN1-205ENST00000525874 IFT172Q9UG01 1749 aa16.61■□□□□ 0.25
SYVN1-205ENST00000525874 SPATA31E1Q6ZUB1 1445 aa16.61■□□□□ 0.25
SYVN1-205ENST00000525874 SRCAPQ6ZRS2 3230 aa16.6■□□□□ 0.25
SYVN1-205ENST00000525874 KNDC1Q76NI1 1749 aa16.6■□□□□ 0.25
SYVN1-205ENST00000525874 RGL3Q3MIN7 710 aa16.6■□□□□ 0.25
SYVN1-205ENST00000525874 ABCC11Q96J66 1382 aa16.6■□□□□ 0.25
SYVN1-205ENST00000525874 ANKRD30BQ9BXX2 1392 aa16.6■□□□□ 0.25
SYVN1-205ENST00000525874 EP400Q96L91 3159 aa16.59■□□□□ 0.25
SYVN1-205ENST00000525874 GJD4Q96KN9 370 aaPredicted RBP16.59■□□□□ 0.25
SYVN1-205ENST00000525874 PLEKHH1Q9ULM0 1364 aa16.59■□□□□ 0.25
SYVN1-205ENST00000525874 TMEM132EQ6IEE7 984 aa16.58■□□□□ 0.24
SYVN1-205ENST00000525874 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.58■□□□□ 0.24
SYVN1-205ENST00000525874 FMN2Q9NZ56 1722 aa16.58■□□□□ 0.24
SYVN1-205ENST00000525874 CCDC125Q86Z20 511 aa16.57■□□□□ 0.24
SYVN1-205ENST00000525874 ZRANB1Q9UGI0 708 aa16.57■□□□□ 0.24
SYVN1-205ENST00000525874 KIF1AQ12756 1690 aa16.56■□□□□ 0.24
SYVN1-205ENST00000525874 PIK3C2GO75747 1445 aa16.56■□□□□ 0.24
SYVN1-205ENST00000525874 SPATA31A3Q5VYP0 1347 aa16.56■□□□□ 0.24
SYVN1-205ENST00000525874 YTHDC2Q9H6S0 1430 aaKnown RBP16.55■□□□□ 0.24
SYVN1-205ENST00000525874 UNC5CLQ8IV45 518 aa16.55■□□□□ 0.24
SYVN1-205ENST00000525874 SLIT2O94813 1529 aa16.55■□□□□ 0.24
SYVN1-205ENST00000525874 MPHOSPH9Q99550 1183 aa16.54■□□□□ 0.24
SYVN1-205ENST00000525874 GLI3P10071 1580 aa16.54■□□□□ 0.24
SYVN1-205ENST00000525874 RALGAPBQ86X10 1494 aa16.54■□□□□ 0.24
SYVN1-205ENST00000525874 KRT28Q7Z3Y7 464 aa16.53■□□□□ 0.24
SYVN1-205ENST00000525874 USP32Q8NFA0 1604 aa16.52■□□□□ 0.24
SYVN1-205ENST00000525874 RGPD8O14715 1765 aaPredicted RBP16.52■□□□□ 0.24
SYVN1-205ENST00000525874 SIRT1Q96EB6 747 aa16.52■□□□□ 0.24
SYVN1-205ENST00000525874 C14orf93Q9H972 538 aaKnown RBP16.5■□□□□ 0.23
SYVN1-205ENST00000525874 PHF8Q9UPP1 1060 aa16.5■□□□□ 0.23
SYVN1-205ENST00000525874 TNS3Q68CZ2 1445 aa16.5■□□□□ 0.23
SYVN1-205ENST00000525874 BRWD3Q6RI45 1802 aa16.49■□□□□ 0.23
SYVN1-205ENST00000525874 BLMP54132 1417 aaPredicted RBP16.48■□□□□ 0.23
SYVN1-205ENST00000525874 HAP1P54257 671 aaPredicted RBP16.48■□□□□ 0.23
SYVN1-205ENST00000525874 PSME1Q06323 249 aa16.48■□□□□ 0.23
SYVN1-205ENST00000525874 NRXN1Q9ULB1 1477 aa16.48■□□□□ 0.23
SYVN1-205ENST00000525874 CABLES1Q8TDN4 633 aa16.47■□□□□ 0.23
SYVN1-205ENST00000525874 DHX57Q6P158 1386 aaKnown RBP16.47■□□□□ 0.23
SYVN1-205ENST00000525874 PLCH1Q4KWH8 1693 aa16.46■□□□□ 0.23
SYVN1-205ENST00000525874 NWD2Q9ULI1 1742 aa16.46■□□□□ 0.23
SYVN1-205ENST00000525874 VPS72Q15906 364 aa16.46■□□□□ 0.23
SYVN1-205ENST00000525874 CFAP70Q5T0N1 1121 aa16.46■□□□□ 0.23
SYVN1-205ENST00000525874 SEPT12Q8IYM1 358 aa16.46■□□□□ 0.23
SYVN1-205ENST00000525874 SBNO1A3KN83 1393 aa16.46■□□□□ 0.23
SYVN1-205ENST00000525874 ABCA3Q99758 1704 aa16.45■□□□□ 0.22
SYVN1-205ENST00000525874 PLEKHG5O94827 1062 aa16.45■□□□□ 0.22
SYVN1-205ENST00000525874 PRAM1Q96QH2 718 aa16.45■□□□□ 0.22
SYVN1-205ENST00000525874 ARHGEF10O15013 1369 aa16.44■□□□□ 0.22
SYVN1-205ENST00000525874 SAFB2Q14151 953 aaKnown RBP eCLIP16.44■□□□□ 0.22
SYVN1-205ENST00000525874 LMOD2Q6P5Q4 547 aa16.44■□□□□ 0.22
SYVN1-205ENST00000525874 ONECUT3O60422 494 aaPredicted RBP16.43■□□□□ 0.22
SYVN1-205ENST00000525874 DEFB132Q7Z7B7 95 aa16.43■□□□□ 0.22
SYVN1-205ENST00000525874 DLC1Q96QB1 1528 aa16.42■□□□□ 0.22
SYVN1-205ENST00000525874 SF3B2Q13435 895 aaKnown RBP16.42■□□□□ 0.22
SYVN1-205ENST00000525874 CCDC9Q9Y3X0 531 aaKnown RBP16.42■□□□□ 0.22
SYVN1-205ENST00000525874 KRT27Q7Z3Y8 459 aa16.41■□□□□ 0.22
SYVN1-205ENST00000525874 PMFBP1Q8TBY8 1022 aa16.41■□□□□ 0.22
SYVN1-205ENST00000525874 POGKQ9P215 609 aa16.41■□□□□ 0.22
SYVN1-205ENST00000525874 ANKARQ7Z5J8 1434 aa16.41■□□□□ 0.22
SYVN1-205ENST00000525874 ACIN1Q9UKV3 1341 aaKnown RBP16.41■□□□□ 0.22
SYVN1-205ENST00000525874 ADGRB2O60241 1585 aa16.4■□□□□ 0.22
SYVN1-205ENST00000525874 FAM83GA6ND36 823 aa16.4■□□□□ 0.22
SYVN1-205ENST00000525874 TRPM3Q9HCF6 1732 aaPredicted RBP16.39■□□□□ 0.21
SYVN1-205ENST00000525874 NRAPQ86VF7 1730 aa16.38■□□□□ 0.21
SYVN1-205ENST00000525874 ADGRB1O14514 1584 aa16.38■□□□□ 0.21
SYVN1-205ENST00000525874 A0A0G2JS52 829 aa16.36■□□□□ 0.21
SYVN1-205ENST00000525874 MYT1Q01538 1121 aa16.36■□□□□ 0.21
SYVN1-205ENST00000525874 ALS2Q96Q42 1657 aa16.36■□□□□ 0.21
SYVN1-205ENST00000525874 FAM98CQ17RN3 349 aaKnown RBP16.35■□□□□ 0.21
SYVN1-205ENST00000525874 HIRIP3Q9BW71 556 aaPredicted RBP16.35■□□□□ 0.21
SYVN1-205ENST00000525874 BTG4Q9NY30 223 aa16.35■□□□□ 0.21
SYVN1-205ENST00000525874 TRAK1Q9UPV9 953 aa16.35■□□□□ 0.21
SYVN1-205ENST00000525874 COL14A1Q05707 1796 aaKnown RBP16.35■□□□□ 0.21
SYVN1-205ENST00000525874 GPRASP1Q5JY77 1395 aa16.35■□□□□ 0.21
SYVN1-205ENST00000525874 MINK1Q8N4C8 1332 aaPredicted RBP16.34■□□□□ 0.21
SYVN1-205ENST00000525874 PRR36Q9H6K5 1346 aa16.34■□□□□ 0.21
SYVN1-205ENST00000525874 EIF3AQ14152 1382 aaKnown RBP16.34■□□□□ 0.21
SYVN1-205ENST00000525874 TULP4Q9NRJ4 1543 aa16.33■□□□□ 0.2
SYVN1-205ENST00000525874 LRP5O75197 1615 aa16.33■□□□□ 0.2
SYVN1-205ENST00000525874 BAG6P46379 1132 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms