RNA–Protein interactions for RNA: ENST00000525854.5

HIF3A-209, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 5

Gene HIF3A, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-209ENST00000525854 ORAI2Q96SN7 254 aa17.05■□□□□ 0.32
HIF3A-209ENST00000525854 LRP6O75581 1613 aa17.05■□□□□ 0.32
HIF3A-209ENST00000525854 NHSL1Q5SYE7 1610 aa17.05■□□□□ 0.32
HIF3A-209ENST00000525854 DHX57Q6P158 1386 aaKnown RBP17.04■□□□□ 0.32
HIF3A-209ENST00000525854 CDC42BPGQ6DT37 1551 aa17.04■□□□□ 0.32
HIF3A-209ENST00000525854 NUTM2BA6NNL0 878 aaPredicted RBP17.04■□□□□ 0.32
HIF3A-209ENST00000525854 NUTM2EB1AL46 878 aaPredicted RBP17.04■□□□□ 0.32
HIF3A-209ENST00000525854 CFAP70Q5T0N1 1121 aa17.04■□□□□ 0.32
HIF3A-209ENST00000525854 NUTM2AQ8IVF1 878 aaPredicted RBP17.04■□□□□ 0.32
HIF3A-209ENST00000525854 STAC3Q96MF2 364 aa17.04■□□□□ 0.32
HIF3A-209ENST00000525854 ESCO1Q5FWF5 840 aa17.03■□□□□ 0.32
HIF3A-209ENST00000525854 ZNF772Q68DY9 489 aaPredicted RBP17.03■□□□□ 0.32
HIF3A-209ENST00000525854 PNPLA6Q8IY17 1366 aa17.02■□□□□ 0.31
HIF3A-209ENST00000525854 SOS2Q07890 1332 aaPredicted RBP17.01■□□□□ 0.31
HIF3A-209ENST00000525854 LAMC1P11047 1609 aa17.01■□□□□ 0.31
HIF3A-209ENST00000525854 KNDC1Q76NI1 1749 aa17.01■□□□□ 0.31
HIF3A-209ENST00000525854 PLEKHH1Q9ULM0 1364 aa17.01■□□□□ 0.31
HIF3A-209ENST00000525854 NPHP3Q7Z494 1330 aa17■□□□□ 0.31
HIF3A-209ENST00000525854 DCAF11Q8TEB1 546 aa17■□□□□ 0.31
HIF3A-209ENST00000525854 KDM2AQ9Y2K7 1162 aa16.98■□□□□ 0.31
HIF3A-209ENST00000525854 NUTM2FA1L443 756 aa16.96■□□□□ 0.31
HIF3A-209ENST00000525854 FOXO3O43524 673 aa16.96■□□□□ 0.31
HIF3A-209ENST00000525854 PRAM1Q96QH2 718 aa16.96■□□□□ 0.31
HIF3A-209ENST00000525854 POGKQ9P215 609 aa16.96■□□□□ 0.31
HIF3A-209ENST00000525854 AFF2P51816 1311 aa16.95■□□□□ 0.3
HIF3A-209ENST00000525854 C8orf37Q96NL8 207 aa16.94■□□□□ 0.3
HIF3A-209ENST00000525854 DLC1Q96QB1 1528 aa16.94■□□□□ 0.3
HIF3A-209ENST00000525854 SAFB2Q14151 953 aaKnown RBP eCLIP16.93■□□□□ 0.3
HIF3A-209ENST00000525854 ADAMTS2O95450 1211 aa16.92■□□□□ 0.3
HIF3A-209ENST00000525854 RXRBP28702 533 aa16.92■□□□□ 0.3
HIF3A-209ENST00000525854 TRAK1Q9UPV9 953 aa16.92■□□□□ 0.3
HIF3A-209ENST00000525854 ADGRB1O14514 1584 aa16.92■□□□□ 0.3
HIF3A-209ENST00000525854 PXDNQ92626 1479 aa16.92■□□□□ 0.3
HIF3A-209ENST00000525854 XPCQ01831 940 aaPredicted RBP16.91■□□□□ 0.3
HIF3A-209ENST00000525854 NGLY1Q96IV0 654 aa16.91■□□□□ 0.3
HIF3A-209ENST00000525854 FMN2Q9NZ56 1722 aa16.9■□□□□ 0.3
HIF3A-209ENST00000525854 PHF8Q9UPP1 1060 aa16.9■□□□□ 0.3
HIF3A-209ENST00000525854 KIF1AQ12756 1690 aa16.88■□□□□ 0.29
HIF3A-209ENST00000525854 EIF3AQ14152 1382 aaKnown RBP16.88■□□□□ 0.29
HIF3A-209ENST00000525854 ANKARQ7Z5J8 1434 aa16.87■□□□□ 0.29
HIF3A-209ENST00000525854 PSME1Q06323 249 aa16.87■□□□□ 0.29
HIF3A-209ENST00000525854 KRT28Q7Z3Y7 464 aa16.87■□□□□ 0.29
HIF3A-209ENST00000525854 QTRT2Q9H974 415 aaKnown RBP16.87■□□□□ 0.29
HIF3A-209ENST00000525854 COL22A1Q8NFW1 1626 aaPredicted RBP16.87■□□□□ 0.29
HIF3A-209ENST00000525854 SPATA31A3Q5VYP0 1347 aa16.86■□□□□ 0.29
HIF3A-209ENST00000525854 CDK12Q9NYV4 1490 aaPredicted RBP16.86■□□□□ 0.29
HIF3A-209ENST00000525854 RBM6P78332 1123 aaKnown RBP16.85■□□□□ 0.29
HIF3A-209ENST00000525854 HIRIP3Q9BW71 556 aaPredicted RBP16.85■□□□□ 0.29
HIF3A-209ENST00000525854 MINK1Q8N4C8 1332 aaPredicted RBP16.85■□□□□ 0.29
HIF3A-209ENST00000525854 ADGRB2O60241 1585 aa16.85■□□□□ 0.29
HIF3A-209ENST00000525854 FNBP4Q8N3X1 1017 aaPredicted RBP16.84■□□□□ 0.29
HIF3A-209ENST00000525854 USP21Q9UK80 565 aa16.84■□□□□ 0.29
HIF3A-209ENST00000525854 WASLO00401 505 aaPredicted RBP16.83■□□□□ 0.28
HIF3A-209ENST00000525854 SBNO1A3KN83 1393 aa16.82■□□□□ 0.28
HIF3A-209ENST00000525854 TRPC5Q9UL62 973 aaPredicted RBP16.82■□□□□ 0.28
HIF3A-209ENST00000525854 TNS3Q68CZ2 1445 aa16.81■□□□□ 0.28
HIF3A-209ENST00000525854 ARHGEF10O15013 1369 aa16.8■□□□□ 0.28
HIF3A-209ENST00000525854 PMFBP1Q8TBY8 1022 aa16.8■□□□□ 0.28
HIF3A-209ENST00000525854 GPRASP1Q5JY77 1395 aa16.79■□□□□ 0.28
HIF3A-209ENST00000525854 HAP1P54257 671 aaPredicted RBP16.79■□□□□ 0.28
HIF3A-209ENST00000525854 TULP4Q9NRJ4 1543 aa16.79■□□□□ 0.28
HIF3A-209ENST00000525854 LMOD2Q6P5Q4 547 aa16.78■□□□□ 0.28
HIF3A-209ENST00000525854 RGPD8O14715 1765 aaPredicted RBP16.77■□□□□ 0.28
HIF3A-209ENST00000525854 PRR36Q9H6K5 1346 aa16.77■□□□□ 0.28
HIF3A-209ENST00000525854 KIAA1210Q9ULL0 1709 aa16.77■□□□□ 0.28
HIF3A-209ENST00000525854 RGS12O14924 1447 aa16.77■□□□□ 0.27
HIF3A-209ENST00000525854 USP32Q8NFA0 1604 aa16.77■□□□□ 0.27
HIF3A-209ENST00000525854 NBPF1Q3BBV0 1214 aa16.76■□□□□ 0.27
HIF3A-209ENST00000525854 NGDNQ8NEJ9 315 aaKnown RBP16.76■□□□□ 0.27
HIF3A-209ENST00000525854 UPF1Q92900 1129 aaKnown RBP eCLIP16.76■□□□□ 0.27
HIF3A-209ENST00000525854 ATRNO75882 1429 aa16.76■□□□□ 0.27
HIF3A-209ENST00000525854 BCL9LQ86UU0 1499 aa16.75■□□□□ 0.27
HIF3A-209ENST00000525854 L3MBTL2Q969R5 705 aa16.75■□□□□ 0.27
HIF3A-209ENST00000525854 NUDT16Q96DE0 195 aaKnown RBP16.75■□□□□ 0.27
HIF3A-209ENST00000525854 ARHGEF28Q8N1W1 1705 aaKnown RBP16.75■□□□□ 0.27
HIF3A-209ENST00000525854 UNC5CLQ8IV45 518 aa16.74■□□□□ 0.27
HIF3A-209ENST00000525854 CABLES1Q8TDN4 633 aa16.74■□□□□ 0.27
HIF3A-209ENST00000525854 CDK19Q9BWU1 502 aa16.74■□□□□ 0.27
HIF3A-209ENST00000525854 SIN3AQ96ST3 1273 aa16.73■□□□□ 0.27
HIF3A-209ENST00000525854 NEUROD1Q13562 356 aa16.72■□□□□ 0.27
HIF3A-209ENST00000525854 GJD4Q96KN9 370 aaPredicted RBP16.72■□□□□ 0.27
HIF3A-209ENST00000525854 MARF1Q9Y4F3 1742 aaKnown RBP16.72■□□□□ 0.27
HIF3A-209ENST00000525854 CENPJQ9HC77 1338 aaPredicted RBP16.71■□□□□ 0.27
HIF3A-209ENST00000525854 SLIT2O94813 1529 aa16.71■□□□□ 0.27
HIF3A-209ENST00000525854 PLEKHG5O94827 1062 aa16.71■□□□□ 0.27
HIF3A-209ENST00000525854 CCDC61Q9Y6R9 512 aa16.71■□□□□ 0.27
HIF3A-209ENST00000525854 ATP7BP35670 1465 aa16.71■□□□□ 0.27
HIF3A-209ENST00000525854 PAK3O75914 559 aaPredicted RBP16.7■□□□□ 0.26
HIF3A-209ENST00000525854 ATAD2Q6PL18 1390 aa16.69■□□□□ 0.26
HIF3A-209ENST00000525854 TRPM3Q9HCF6 1732 aaPredicted RBP16.67■□□□□ 0.26
HIF3A-209ENST00000525854 PLEKHG3A1L390 1219 aa16.67■□□□□ 0.26
HIF3A-209ENST00000525854 SRPK2P78362 688 aaKnown RBP16.67■□□□□ 0.26
HIF3A-209ENST00000525854 ITSN1Q15811 1721 aa16.67■□□□□ 0.26
HIF3A-209ENST00000525854 POLR3AO14802 1390 aaPredicted RBP16.66■□□□□ 0.26
HIF3A-209ENST00000525854 FAM83GA6ND36 823 aa16.66■□□□□ 0.26
HIF3A-209ENST00000525854 VPS72Q15906 364 aa16.66■□□□□ 0.26
HIF3A-209ENST00000525854 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.66■□□□□ 0.26
HIF3A-209ENST00000525854 ACEP12821 1306 aa16.66■□□□□ 0.26
HIF3A-209ENST00000525854 ROCK2O75116 1388 aaKnown RBP16.65■□□□□ 0.26
HIF3A-209ENST00000525854 NBPF8Q3BBV2 869 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms