RNA–Protein interactions for RNA: ENST00000525852.3

CTTN-210, Transcript of cortactin, humanhuman

TSL 5

Gene CTTN, Length 1,470 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-210ENST00000525852 CLSPNQ9HAW4 1339 aa17.72■□□□□ 0.43
CTTN-210ENST00000525852 TRPM1Q7Z4N2 1603 aa17.72■□□□□ 0.43
CTTN-210ENST00000525852 TRAK1Q9UPV9 953 aa17.71■□□□□ 0.43
CTTN-210ENST00000525852 ARHGEF28Q8N1W1 1705 aaKnown RBP17.71■□□□□ 0.43
CTTN-210ENST00000525852 NBPF8Q3BBV2 869 aa17.7■□□□□ 0.42
CTTN-210ENST00000525852 SIRT1Q96EB6 747 aa17.7■□□□□ 0.42
CTTN-210ENST00000525852 PRAM1Q96QH2 718 aa17.7■□□□□ 0.42
CTTN-210ENST00000525852 CDC42BPGQ6DT37 1551 aa17.7■□□□□ 0.42
CTTN-210ENST00000525852 SAFB2Q14151 953 aaKnown RBP eCLIP17.69■□□□□ 0.42
CTTN-210ENST00000525852 C1orf167Q5SNV9 1468 aa17.66■□□□□ 0.42
CTTN-210ENST00000525852 BRINP3Q76B58 766 aa17.65■□□□□ 0.42
CTTN-210ENST00000525852 POGKQ9P215 609 aa17.65■□□□□ 0.42
CTTN-210ENST00000525852 FMN2Q9NZ56 1722 aa17.65■□□□□ 0.42
CTTN-210ENST00000525852 PHLPP1O60346 1717 aa17.63■□□□□ 0.41
CTTN-210ENST00000525852 ADGRB2O60241 1585 aa17.63■□□□□ 0.41
CTTN-210ENST00000525852 NUTM2FA1L443 756 aa17.63■□□□□ 0.41
CTTN-210ENST00000525852 ROCK2O75116 1388 aaKnown RBP17.62■□□□□ 0.41
CTTN-210ENST00000525852 HIRIP3Q9BW71 556 aaPredicted RBP17.62■□□□□ 0.41
CTTN-210ENST00000525852 RGPD8O14715 1765 aaPredicted RBP17.62■□□□□ 0.41
CTTN-210ENST00000525852 MINK1Q8N4C8 1332 aaPredicted RBP17.61■□□□□ 0.41
CTTN-210ENST00000525852 ORAI2Q96SN7 254 aa17.61■□□□□ 0.41
CTTN-210ENST00000525852 COL16A1Q07092 1604 aaPredicted RBP17.61■□□□□ 0.41
CTTN-210ENST00000525852 NHSL1Q5SYE7 1610 aa17.61■□□□□ 0.41
CTTN-210ENST00000525852 AHDC1Q5TGY3 1603 aaPredicted RBP17.61■□□□□ 0.41
CTTN-210ENST00000525852 RALGAPBQ86X10 1494 aa17.6■□□□□ 0.41
CTTN-210ENST00000525852 GPRASP1Q5JY77 1395 aa17.59■□□□□ 0.41
CTTN-210ENST00000525852 DDX17Q92841 729 aaKnown RBP17.59■□□□□ 0.41
CTTN-210ENST00000525852 TIMELESSQ9UNS1 1208 aa17.59■□□□□ 0.41
CTTN-210ENST00000525852 USP32Q8NFA0 1604 aa17.59■□□□□ 0.41
CTTN-210ENST00000525852 QRICH2Q9H0J4 1663 aa17.57■□□□□ 0.4
CTTN-210ENST00000525852 ESCO1Q5FWF5 840 aa17.56■□□□□ 0.4
CTTN-210ENST00000525852 CARD11Q9BXL7 1154 aa17.55■□□□□ 0.4
CTTN-210ENST00000525852 CENPJQ9HC77 1338 aaPredicted RBP17.54■□□□□ 0.4
CTTN-210ENST00000525852 PRR36Q9H6K5 1346 aa17.53■□□□□ 0.4
CTTN-210ENST00000525852 WASLO00401 505 aaPredicted RBP17.53■□□□□ 0.4
CTTN-210ENST00000525852 TULP4Q9NRJ4 1543 aa17.53■□□□□ 0.4
CTTN-210ENST00000525852 ANKARQ7Z5J8 1434 aa17.51■□□□□ 0.39
CTTN-210ENST00000525852 KIF1AQ12756 1690 aa17.51■□□□□ 0.39
CTTN-210ENST00000525852 MED1Q15648 1581 aaPredicted RBP17.5■□□□□ 0.39
CTTN-210ENST00000525852 ATP7BP35670 1465 aa17.5■□□□□ 0.39
CTTN-210ENST00000525852 EIF3AQ14152 1382 aaKnown RBP17.5■□□□□ 0.39
CTTN-210ENST00000525852 FOXO3O43524 673 aa17.5■□□□□ 0.39
CTTN-210ENST00000525852 PXDNQ92626 1479 aa17.49■□□□□ 0.39
CTTN-210ENST00000525852 XPCQ01831 940 aaPredicted RBP17.49■□□□□ 0.39
CTTN-210ENST00000525852 CDK19Q9BWU1 502 aa17.49■□□□□ 0.39
CTTN-210ENST00000525852 SOS2Q07890 1332 aaPredicted RBP17.48■□□□□ 0.39
CTTN-210ENST00000525852 SHPRHQ149N8 1683 aa17.48■□□□□ 0.39
CTTN-210ENST00000525852 JCADQ9P266 1359 aa17.48■□□□□ 0.39
CTTN-210ENST00000525852 PHF8Q9UPP1 1060 aa17.47■□□□□ 0.39
CTTN-210ENST00000525852 TOPAZ1Q8N9V7 1692 aa17.47■□□□□ 0.39
CTTN-210ENST00000525852 ITSN1Q15811 1721 aa17.46■□□□□ 0.39
CTTN-210ENST00000525852 PMFBP1Q8TBY8 1022 aa17.46■□□□□ 0.39
CTTN-210ENST00000525852 NPHP3Q7Z494 1330 aa17.46■□□□□ 0.39
CTTN-210ENST00000525852 NUDT16Q96DE0 195 aaKnown RBP17.45■□□□□ 0.38
CTTN-210ENST00000525852 CABP2Q9NPB3 220 aa17.44■□□□□ 0.38
CTTN-210ENST00000525852 LRP6O75581 1613 aa17.44■□□□□ 0.38
CTTN-210ENST00000525852 LRRC59Q96AG4 307 aaKnown RBP17.44■□□□□ 0.38
CTTN-210ENST00000525852 PNPLA6Q8IY17 1366 aa17.43■□□□□ 0.38
CTTN-210ENST00000525852 SRPK2P78362 688 aaKnown RBP17.43■□□□□ 0.38
CTTN-210ENST00000525852 ST20-MTHFSA0A0A6YYL1 179 aa17.42■□□□□ 0.38
CTTN-210ENST00000525852 USP47Q96K76 1375 aa17.42■□□□□ 0.38
CTTN-210ENST00000525852 DISP3Q9P2K9 1392 aa17.41■□□□□ 0.38
CTTN-210ENST00000525852 SBNO2Q9Y2G9 1366 aa17.41■□□□□ 0.38
CTTN-210ENST00000525852 EVC2Q86UK5 1308 aa17.41■□□□□ 0.38
CTTN-210ENST00000525852 TRPM3Q9HCF6 1732 aaPredicted RBP17.4■□□□□ 0.38
CTTN-210ENST00000525852 KRT28Q7Z3Y7 464 aa17.4■□□□□ 0.38
CTTN-210ENST00000525852 TESK2Q96S53 571 aa17.39■□□□□ 0.37
CTTN-210ENST00000525852 CCDC61Q9Y6R9 512 aa17.39■□□□□ 0.37
CTTN-210ENST00000525852 SPATA31A6Q5VVP1 1343 aa17.38■□□□□ 0.37
CTTN-210ENST00000525852 COL22A1Q8NFW1 1626 aaPredicted RBP17.38■□□□□ 0.37
CTTN-210ENST00000525852 PPIP5K1Q6PFW1 1433 aa17.38■□□□□ 0.37
CTTN-210ENST00000525852 PSME1Q06323 249 aa17.37■□□□□ 0.37
CTTN-210ENST00000525852 SPATA31A3Q5VYP0 1347 aa17.37■□□□□ 0.37
CTTN-210ENST00000525852 NUTM2BA6NNL0 878 aaPredicted RBP17.37■□□□□ 0.37
CTTN-210ENST00000525852 NUTM2EB1AL46 878 aaPredicted RBP17.37■□□□□ 0.37
CTTN-210ENST00000525852 NUTM2AQ8IVF1 878 aaPredicted RBP17.37■□□□□ 0.37
CTTN-210ENST00000525852 NGDNQ8NEJ9 315 aaKnown RBP17.37■□□□□ 0.37
CTTN-210ENST00000525852 TNS3Q68CZ2 1445 aa17.36■□□□□ 0.37
CTTN-210ENST00000525852 POLR3AO14802 1390 aaPredicted RBP17.36■□□□□ 0.37
CTTN-210ENST00000525852 PLEKHG3A1L390 1219 aa17.36■□□□□ 0.37
CTTN-210ENST00000525852 ACEP12821 1306 aa17.35■□□□□ 0.37
CTTN-210ENST00000525852 ALS2Q96Q42 1657 aa17.35■□□□□ 0.37
CTTN-210ENST00000525852 SBNO1A3KN83 1393 aa17.35■□□□□ 0.37
CTTN-210ENST00000525852 CABP1Q9NZU7 370 aa17.34■□□□□ 0.37
CTTN-210ENST00000525852 RGS17Q9UGC6 210 aaPredicted RBP17.32■□□□□ 0.36
CTTN-210ENST00000525852 ABCA3Q99758 1704 aa17.32■□□□□ 0.36
CTTN-210ENST00000525852 PHF23Q9BUL5 403 aaPredicted RBP17.31■□□□□ 0.36
CTTN-210ENST00000525852 ATAD2Q6PL18 1390 aa17.31■□□□□ 0.36
CTTN-210ENST00000525852 PLEKHG5O94827 1062 aa17.31■□□□□ 0.36
CTTN-210ENST00000525852 LMOD2Q6P5Q4 547 aa17.31■□□□□ 0.36
CTTN-210ENST00000525852 AKAP12Q02952 1782 aa17.3■□□□□ 0.36
CTTN-210ENST00000525852 ADAMTS2O95450 1211 aa17.3■□□□□ 0.36
CTTN-210ENST00000525852 MEX3CQ5U5Q3 659 aaKnown RBP17.3■□□□□ 0.36
CTTN-210ENST00000525852 CABLES1Q8TDN4 633 aa17.3■□□□□ 0.36
CTTN-210ENST00000525852 PAK3O75914 559 aaPredicted RBP17.29■□□□□ 0.36
CTTN-210ENST00000525852 HSPA5P11021 654 aaKnown RBP17.29■□□□□ 0.36
CTTN-210ENST00000525852 EIF4G2P78344 907 aaKnown RBP eCLIP17.29■□□□□ 0.36
CTTN-210ENST00000525852 MARF1Q9Y4F3 1742 aaKnown RBP17.28■□□□□ 0.36
CTTN-210ENST00000525852 CRYBG1Q9Y4K1 1723 aa17.28■□□□□ 0.36
CTTN-210ENST00000525852 ARHGEF10O15013 1369 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms