RNA–Protein interactions for RNA: ENST00000525602.1

CLP1-202, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLP1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-202ENST00000525602 C8orf37Q96NL8 207 aa18.68■□□□□ 0.58
CLP1-202ENST00000525602 ROBO2Q9HCK4 1378 aa18.67■□□□□ 0.58
CLP1-202ENST00000525602 EP400Q96L91 3159 aa18.66■□□□□ 0.58
CLP1-202ENST00000525602 LAMC1P11047 1609 aa18.66■□□□□ 0.58
CLP1-202ENST00000525602 C1orf167Q5SNV9 1468 aa18.66■□□□□ 0.58
CLP1-202ENST00000525602 CDK12Q9NYV4 1490 aaPredicted RBP18.66■□□□□ 0.58
CLP1-202ENST00000525602 TRIM26Q12899 539 aaPredicted RBP18.66■□□□□ 0.58
CLP1-202ENST00000525602 KNDC1Q76NI1 1749 aa18.64■□□□□ 0.57
CLP1-202ENST00000525602 LRRC59Q96AG4 307 aaKnown RBP18.63■□□□□ 0.57
CLP1-202ENST00000525602 LRPPRCP42704 1394 aaKnown RBP18.62■□□□□ 0.57
CLP1-202ENST00000525602 ADAMTS2O95450 1211 aa18.62■□□□□ 0.57
CLP1-202ENST00000525602 TECPR2O15040 1411 aa18.62■□□□□ 0.57
CLP1-202ENST00000525602 DHX57Q6P158 1386 aaKnown RBP18.62■□□□□ 0.57
CLP1-202ENST00000525602 ORAI2Q96SN7 254 aa18.61■□□□□ 0.57
CLP1-202ENST00000525602 C14orf93Q9H972 538 aaKnown RBP18.61■□□□□ 0.57
CLP1-202ENST00000525602 TMEM132EQ6IEE7 984 aa18.6■□□□□ 0.57
CLP1-202ENST00000525602 YTHDC2Q9H6S0 1430 aaKnown RBP18.59■□□□□ 0.57
CLP1-202ENST00000525602 CFAP70Q5T0N1 1121 aa18.59■□□□□ 0.57
CLP1-202ENST00000525602 DCAF11Q8TEB1 546 aa18.59■□□□□ 0.57
CLP1-202ENST00000525602 ABCC11Q96J66 1382 aa18.58■□□□□ 0.57
CLP1-202ENST00000525602 QTRT2Q9H974 415 aaKnown RBP18.57■□□□□ 0.56
CLP1-202ENST00000525602 STK26Q9P289 416 aa18.57■□□□□ 0.56
CLP1-202ENST00000525602 KDM2AQ9Y2K7 1162 aa18.57■□□□□ 0.56
CLP1-202ENST00000525602 COL22A1Q8NFW1 1626 aaPredicted RBP18.57■□□□□ 0.56
CLP1-202ENST00000525602 STAC3Q96MF2 364 aa18.56■□□□□ 0.56
CLP1-202ENST00000525602 ADGRB1O14514 1584 aa18.56■□□□□ 0.56
CLP1-202ENST00000525602 SOS2Q07890 1332 aaPredicted RBP18.56■□□□□ 0.56
CLP1-202ENST00000525602 RBM6P78332 1123 aaKnown RBP18.55■□□□□ 0.56
CLP1-202ENST00000525602 NGLY1Q96IV0 654 aa18.55■□□□□ 0.56
CLP1-202ENST00000525602 CDC42BPGQ6DT37 1551 aa18.55■□□□□ 0.56
CLP1-202ENST00000525602 PLEKHH1Q9ULM0 1364 aa18.53■□□□□ 0.56
CLP1-202ENST00000525602 MARF1Q9Y4F3 1742 aaKnown RBP18.52■□□□□ 0.56
CLP1-202ENST00000525602 XPCQ01831 940 aaPredicted RBP18.52■□□□□ 0.55
CLP1-202ENST00000525602 WAPLQ7Z5K2 1190 aa18.52■□□□□ 0.55
CLP1-202ENST00000525602 PXDNQ92626 1479 aa18.52■□□□□ 0.55
CLP1-202ENST00000525602 DLC1Q96QB1 1528 aa18.51■□□□□ 0.55
CLP1-202ENST00000525602 SIN3AQ96ST3 1273 aa18.5■□□□□ 0.55
CLP1-202ENST00000525602 USP21Q9UK80 565 aa18.5■□□□□ 0.55
CLP1-202ENST00000525602 KIAA1210Q9ULL0 1709 aa18.49■□□□□ 0.55
CLP1-202ENST00000525602 SIRT1Q96EB6 747 aa18.49■□□□□ 0.55
CLP1-202ENST00000525602 ATRNO75882 1429 aa18.48■□□□□ 0.55
CLP1-202ENST00000525602 NUTM2FA1L443 756 aa18.48■□□□□ 0.55
CLP1-202ENST00000525602 ESCO1Q5FWF5 840 aa18.47■□□□□ 0.55
CLP1-202ENST00000525602 FMN2Q9NZ56 1722 aa18.46■□□□□ 0.55
CLP1-202ENST00000525602 PRAM1Q96QH2 718 aa18.45■□□□□ 0.54
CLP1-202ENST00000525602 ATAD2Q6PL18 1390 aa18.45■□□□□ 0.54
CLP1-202ENST00000525602 NEUROD1Q13562 356 aa18.44■□□□□ 0.54
CLP1-202ENST00000525602 BCL9LQ86UU0 1499 aa18.44■□□□□ 0.54
CLP1-202ENST00000525602 FNBP4Q8N3X1 1017 aaPredicted RBP18.44■□□□□ 0.54
CLP1-202ENST00000525602 L3MBTL2Q969R5 705 aa18.44■□□□□ 0.54
CLP1-202ENST00000525602 TRPC5Q9UL62 973 aaPredicted RBP18.44■□□□□ 0.54
CLP1-202ENST00000525602 RGPD8O14715 1765 aaPredicted RBP18.44■□□□□ 0.54
CLP1-202ENST00000525602 ARHGEF28Q8N1W1 1705 aaKnown RBP18.44■□□□□ 0.54
CLP1-202ENST00000525602 NPHP3Q7Z494 1330 aa18.43■□□□□ 0.54
CLP1-202ENST00000525602 FOXO3O43524 673 aa18.43■□□□□ 0.54
CLP1-202ENST00000525602 TRAK1Q9UPV9 953 aa18.43■□□□□ 0.54
CLP1-202ENST00000525602 ADGRB2O60241 1585 aa18.43■□□□□ 0.54
CLP1-202ENST00000525602 SAFB2Q14151 953 aaKnown RBP eCLIP18.42■□□□□ 0.54
CLP1-202ENST00000525602 POGKQ9P215 609 aa18.42■□□□□ 0.54
CLP1-202ENST00000525602 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.41■□□□□ 0.54
CLP1-202ENST00000525602 GLI3P10071 1580 aa18.41■□□□□ 0.54
CLP1-202ENST00000525602 KIF1AQ12756 1690 aa18.39■□□□□ 0.54
CLP1-202ENST00000525602 USP32Q8NFA0 1604 aa18.39■□□□□ 0.53
CLP1-202ENST00000525602 TRPM1Q7Z4N2 1603 aa18.39■□□□□ 0.53
CLP1-202ENST00000525602 BRWD3Q6RI45 1802 aa18.39■□□□□ 0.53
CLP1-202ENST00000525602 ABCA3Q99758 1704 aa18.37■□□□□ 0.53
CLP1-202ENST00000525602 NBPF1Q3BBV0 1214 aa18.37■□□□□ 0.53
CLP1-202ENST00000525602 RALGAPBQ86X10 1494 aa18.36■□□□□ 0.53
CLP1-202ENST00000525602 PLCH1Q4KWH8 1693 aa18.35■□□□□ 0.53
CLP1-202ENST00000525602 PLEKHG5O94827 1062 aa18.35■□□□□ 0.53
CLP1-202ENST00000525602 MINK1Q8N4C8 1332 aaPredicted RBP18.35■□□□□ 0.53
CLP1-202ENST00000525602 SLIT2O94813 1529 aa18.34■□□□□ 0.53
CLP1-202ENST00000525602 PCGF6Q9BYE7 350 aa18.34■□□□□ 0.53
CLP1-202ENST00000525602 ANKARQ7Z5J8 1434 aa18.34■□□□□ 0.53
CLP1-202ENST00000525602 GJD4Q96KN9 370 aaPredicted RBP18.33■□□□□ 0.53
CLP1-202ENST00000525602 HIRIP3Q9BW71 556 aaPredicted RBP18.33■□□□□ 0.53
CLP1-202ENST00000525602 TONSLQ96HA7 1378 aa18.33■□□□□ 0.53
CLP1-202ENST00000525602 SPATA31A3Q5VYP0 1347 aa18.33■□□□□ 0.52
CLP1-202ENST00000525602 TULP4Q9NRJ4 1543 aa18.32■□□□□ 0.52
CLP1-202ENST00000525602 EIF3AQ14152 1382 aaKnown RBP18.31■□□□□ 0.52
CLP1-202ENST00000525602 CABLES1Q8TDN4 633 aa18.31■□□□□ 0.52
CLP1-202ENST00000525602 TNS3Q68CZ2 1445 aa18.3■□□□□ 0.52
CLP1-202ENST00000525602 ROCK2O75116 1388 aaKnown RBP18.3■□□□□ 0.52
CLP1-202ENST00000525602 KRT28Q7Z3Y7 464 aa18.3■□□□□ 0.52
CLP1-202ENST00000525602 WASLO00401 505 aaPredicted RBP18.29■□□□□ 0.52
CLP1-202ENST00000525602 NBPF8Q3BBV2 869 aa18.29■□□□□ 0.52
CLP1-202ENST00000525602 UNC5CLQ8IV45 518 aa18.29■□□□□ 0.52
CLP1-202ENST00000525602 QRICH2Q9H0J4 1663 aa18.28■□□□□ 0.52
CLP1-202ENST00000525602 PHF8Q9UPP1 1060 aa18.28■□□□□ 0.52
CLP1-202ENST00000525602 PRR36Q9H6K5 1346 aa18.27■□□□□ 0.52
CLP1-202ENST00000525602 NWD2Q9ULI1 1742 aa18.27■□□□□ 0.52
CLP1-202ENST00000525602 ZRANB1Q9UGI0 708 aa18.27■□□□□ 0.51
CLP1-202ENST00000525602 GPRASP1Q5JY77 1395 aa18.26■□□□□ 0.51
CLP1-202ENST00000525602 ATP7BP35670 1465 aa18.26■□□□□ 0.51
CLP1-202ENST00000525602 NRAPQ86VF7 1730 aa18.26■□□□□ 0.51
CLP1-202ENST00000525602 TRPM3Q9HCF6 1732 aaPredicted RBP18.26■□□□□ 0.51
CLP1-202ENST00000525602 CENPJQ9HC77 1338 aaPredicted RBP18.26■□□□□ 0.51
CLP1-202ENST00000525602 ITSN1Q15811 1721 aa18.25■□□□□ 0.51
CLP1-202ENST00000525602 LMOD2Q6P5Q4 547 aa18.24■□□□□ 0.51
CLP1-202ENST00000525602 DEFB132Q7Z7B7 95 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms