RNA–Protein interactions for RNA: ENST00000525506.1

RBBP4-216, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

TSL 2

Gene RBBP4, Length 501 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-216ENST00000525506 MEX3CQ5U5Q3 659 aaKnown RBP15.35■□□□□ 0.05
RBBP4-216ENST00000525506 YTHDC2Q9H6S0 1430 aaKnown RBP15.34■□□□□ 0.05
RBBP4-216ENST00000525506 NUTM2FA1L443 756 aa15.34■□□□□ 0.05
RBBP4-216ENST00000525506 C14orf93Q9H972 538 aaKnown RBP15.34■□□□□ 0.05
RBBP4-216ENST00000525506 ABCC11Q96J66 1382 aa15.34■□□□□ 0.05
RBBP4-216ENST00000525506 TECPR2O15040 1411 aa15.34■□□□□ 0.05
RBBP4-216ENST00000525506 MYOM2P54296 1465 aa15.33■□□□□ 0.05
RBBP4-216ENST00000525506 NRXN1Q9ULB1 1477 aa15.33■□□□□ 0.05
RBBP4-216ENST00000525506 LRRC59Q96AG4 307 aaKnown RBP15.33■□□□□ 0.04
RBBP4-216ENST00000525506 KDM2AQ9Y2K7 1162 aa15.33■□□□□ 0.04
RBBP4-216ENST00000525506 CDC42BPGQ6DT37 1551 aa15.32■□□□□ 0.04
RBBP4-216ENST00000525506 RGPD8O14715 1765 aaPredicted RBP15.32■□□□□ 0.04
RBBP4-216ENST00000525506 LAMC1P11047 1609 aa15.32■□□□□ 0.04
RBBP4-216ENST00000525506 TRIM26Q12899 539 aaPredicted RBP15.31■□□□□ 0.04
RBBP4-216ENST00000525506 PNPLA6Q8IY17 1366 aa15.31■□□□□ 0.04
RBBP4-216ENST00000525506 ESCO1Q5FWF5 840 aa15.3■□□□□ 0.04
RBBP4-216ENST00000525506 FMN2Q9NZ56 1722 aa15.3■□□□□ 0.04
RBBP4-216ENST00000525506 SAFB2Q14151 953 aaKnown RBP eCLIP15.29■□□□□ 0.04
RBBP4-216ENST00000525506 DCAF11Q8TEB1 546 aa15.29■□□□□ 0.04
RBBP4-216ENST00000525506 STAC3Q96MF2 364 aa15.29■□□□□ 0.04
RBBP4-216ENST00000525506 DHX57Q6P158 1386 aaKnown RBP15.28■□□□□ 0.04
RBBP4-216ENST00000525506 SOS2Q07890 1332 aaPredicted RBP15.28■□□□□ 0.04
RBBP4-216ENST00000525506 XPCQ01831 940 aaPredicted RBP15.28■□□□□ 0.04
RBBP4-216ENST00000525506 AFF2P51816 1311 aa15.26■□□□□ 0.03
RBBP4-216ENST00000525506 FOXO3O43524 673 aa15.26■□□□□ 0.03
RBBP4-216ENST00000525506 PRAM1Q96QH2 718 aa15.26■□□□□ 0.03
RBBP4-216ENST00000525506 ADGRB1O14514 1584 aa15.25■□□□□ 0.03
RBBP4-216ENST00000525506 ADAMTS2O95450 1211 aa15.25■□□□□ 0.03
RBBP4-216ENST00000525506 ZNF772Q68DY9 489 aaPredicted RBP15.25■□□□□ 0.03
RBBP4-216ENST00000525506 SIRT1Q96EB6 747 aa15.25■□□□□ 0.03
RBBP4-216ENST00000525506 C8orf37Q96NL8 207 aa15.25■□□□□ 0.03
RBBP4-216ENST00000525506 TRAK1Q9UPV9 953 aa15.25■□□□□ 0.03
RBBP4-216ENST00000525506 NPHP3Q7Z494 1330 aa15.23■□□□□ 0.03
RBBP4-216ENST00000525506 PXDNQ92626 1479 aa15.23■□□□□ 0.03
RBBP4-216ENST00000525506 POGKQ9P215 609 aa15.23■□□□□ 0.03
RBBP4-216ENST00000525506 DLC1Q96QB1 1528 aa15.22■□□□□ 0.03
RBBP4-216ENST00000525506 COL22A1Q8NFW1 1626 aaPredicted RBP15.21■□□□□ 0.03
RBBP4-216ENST00000525506 HIRIP3Q9BW71 556 aaPredicted RBP15.21■□□□□ 0.03
RBBP4-216ENST00000525506 KIF1AQ12756 1690 aa15.21■□□□□ 0.03
RBBP4-216ENST00000525506 NGLY1Q96IV0 654 aa15.2■□□□□ 0.02
RBBP4-216ENST00000525506 USP32Q8NFA0 1604 aa15.2■□□□□ 0.02
RBBP4-216ENST00000525506 MINK1Q8N4C8 1332 aaPredicted RBP15.19■□□□□ 0.02
RBBP4-216ENST00000525506 RXRBP28702 533 aa15.19■□□□□ 0.02
RBBP4-216ENST00000525506 MARF1Q9Y4F3 1742 aaKnown RBP15.19■□□□□ 0.02
RBBP4-216ENST00000525506 ARHGEF28Q8N1W1 1705 aaKnown RBP15.18■□□□□ 0.02
RBBP4-216ENST00000525506 QTRT2Q9H974 415 aaKnown RBP15.18■□□□□ 0.02
RBBP4-216ENST00000525506 PHF8Q9UPP1 1060 aa15.18■□□□□ 0.02
RBBP4-216ENST00000525506 KRT28Q7Z3Y7 464 aa15.17■□□□□ 0.02
RBBP4-216ENST00000525506 ADGRB2O60241 1585 aa15.16■□□□□ 0.02
RBBP4-216ENST00000525506 PLEKHG5O94827 1062 aa15.16■□□□□ 0.02
RBBP4-216ENST00000525506 PMFBP1Q8TBY8 1022 aa15.16■□□□□ 0.02
RBBP4-216ENST00000525506 KIAA1210Q9ULL0 1709 aa15.16■□□□□ 0.02
RBBP4-216ENST00000525506 SPATA31A3Q5VYP0 1347 aa15.15■□□□□ 0.02
RBBP4-216ENST00000525506 NBPF1Q3BBV0 1214 aa15.14■□□□□ 0.01
RBBP4-216ENST00000525506 USP21Q9UK80 565 aa15.14■□□□□ 0.01
RBBP4-216ENST00000525506 PRR36Q9H6K5 1346 aa15.14■□□□□ 0.01
RBBP4-216ENST00000525506 SIN3AQ96ST3 1273 aa15.13■□□□□ 0.01
RBBP4-216ENST00000525506 ANKARQ7Z5J8 1434 aa15.12■□□□□ 0.01
RBBP4-216ENST00000525506 WASLO00401 505 aaPredicted RBP15.12■□□□□ 0.01
RBBP4-216ENST00000525506 PSME1Q06323 249 aa15.12■□□□□ 0.01
RBBP4-216ENST00000525506 LMOD2Q6P5Q4 547 aa15.12■□□□□ 0.01
RBBP4-216ENST00000525506 CABLES1Q8TDN4 633 aa15.12■□□□□ 0.01
RBBP4-216ENST00000525506 RBM6P78332 1123 aaKnown RBP15.11■□□□□ 0.01
RBBP4-216ENST00000525506 FNBP4Q8N3X1 1017 aaPredicted RBP15.11■□□□□ 0.01
RBBP4-216ENST00000525506 RGS12O14924 1447 aa15.1■□□□□ 0.01
RBBP4-216ENST00000525506 TNS3Q68CZ2 1445 aa15.1■□□□□ 0.01
RBBP4-216ENST00000525506 CDK12Q9NYV4 1490 aaPredicted RBP15.1■□□□□ 0.01
RBBP4-216ENST00000525506 TRPM3Q9HCF6 1732 aaPredicted RBP15.1■□□□□ 0.01
RBBP4-216ENST00000525506 TULP4Q9NRJ4 1543 aa15.1■□□□□ 0.01
RBBP4-216ENST00000525506 ABCA3Q99758 1704 aa15.09■□□□□ 0.01
RBBP4-216ENST00000525506 NEUROD1Q13562 356 aa15.09■□□□□ 0.01
RBBP4-216ENST00000525506 UPF1Q92900 1129 aaKnown RBP eCLIP15.09■□□□□ 0.01
RBBP4-216ENST00000525506 BCL9LQ86UU0 1499 aa15.08■□□□□ 0.01
RBBP4-216ENST00000525506 L3MBTL2Q969R5 705 aa15.08■□□□□ 0
RBBP4-216ENST00000525506 TRPC5Q9UL62 973 aaPredicted RBP15.08■□□□□ 0
RBBP4-216ENST00000525506 SBNO1A3KN83 1393 aa15.08■□□□□ 0
RBBP4-216ENST00000525506 ATRNO75882 1429 aa15.08■□□□□ 0
RBBP4-216ENST00000525506 ITSN1Q15811 1721 aa15.07■□□□□ 0
RBBP4-216ENST00000525506 ALS2Q96Q42 1657 aa15.06■□□□□ 0
RBBP4-216ENST00000525506 HAP1P54257 671 aaPredicted RBP15.06■□□□□ 0
RBBP4-216ENST00000525506 CDK19Q9BWU1 502 aa15.06■□□□□ 0
RBBP4-216ENST00000525506 EIF3AQ14152 1382 aaKnown RBP15.06■□□□□ 0
RBBP4-216ENST00000525506 NGDNQ8NEJ9 315 aaKnown RBP15.05■□□□□ -0
RBBP4-216ENST00000525506 NUDT16Q96DE0 195 aaKnown RBP15.05■□□□□ -0
RBBP4-216ENST00000525506 ATP7BP35670 1465 aa15.05■□□□□ -0
RBBP4-216ENST00000525506 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.05■□□□□ -0
RBBP4-216ENST00000525506 PLCH1Q4KWH8 1693 aa15.04■□□□□ -0
RBBP4-216ENST00000525506 ARHGEF10O15013 1369 aa15.04■□□□□ -0
RBBP4-216ENST00000525506 GPRASP1Q5JY77 1395 aa15.04■□□□□ -0
RBBP4-216ENST00000525506 CLSPNQ9HAW4 1339 aa15.04■□□□□ -0
RBBP4-216ENST00000525506 QRICH2Q9H0J4 1663 aa15.03■□□□□ -0
RBBP4-216ENST00000525506 SLIT2O94813 1529 aa15.03■□□□□ -0
RBBP4-216ENST00000525506 PAK3O75914 559 aaPredicted RBP15.03■□□□□ -0
RBBP4-216ENST00000525506 TOPAZ1Q8N9V7 1692 aa15.03■□□□□ -0
RBBP4-216ENST00000525506 TRPM1Q7Z4N2 1603 aa15.03■□□□□ -0
RBBP4-216ENST00000525506 UNC5CLQ8IV45 518 aa15.02■□□□□ -0
RBBP4-216ENST00000525506 GJD4Q96KN9 370 aaPredicted RBP15.02■□□□□ -0
RBBP4-216ENST00000525506 FAM83GA6ND36 823 aa15.01□□□□□ -0.01
RBBP4-216ENST00000525506 GLI3P10071 1580 aa15.01□□□□□ -0.01
RBBP4-216ENST00000525506 CRYBG1Q9Y4K1 1723 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms