RNA–Protein interactions for RNA: ENST00000525395.2

LRRK1-203, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 5

Gene LRRK1, Length 737 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-203ENST00000525395 ACIN1Q9UKV3 1341 aaKnown RBP14.01□□□□□ -0.17
LRRK1-203ENST00000525395 SHPRHQ149N8 1683 aa14.01□□□□□ -0.17
LRRK1-203ENST00000525395 MEX3CQ5U5Q3 659 aaKnown RBP14□□□□□ -0.17
LRRK1-203ENST00000525395 TECPR2O15040 1411 aa13.99□□□□□ -0.17
LRRK1-203ENST00000525395 YTHDC2Q9H6S0 1430 aaKnown RBP13.99□□□□□ -0.17
LRRK1-203ENST00000525395 SOS2Q07890 1332 aaPredicted RBP13.99□□□□□ -0.17
LRRK1-203ENST00000525395 HRCP23327 699 aa13.99□□□□□ -0.17
LRRK1-203ENST00000525395 ESCO1Q5FWF5 840 aa13.99□□□□□ -0.17
LRRK1-203ENST00000525395 KDM2AQ9Y2K7 1162 aa13.99□□□□□ -0.17
LRRK1-203ENST00000525395 NRXN1Q9ULB1 1477 aa13.99□□□□□ -0.17
LRRK1-203ENST00000525395 PNPLA6Q8IY17 1366 aa13.98□□□□□ -0.17
LRRK1-203ENST00000525395 XPCQ01831 940 aaPredicted RBP13.98□□□□□ -0.17
LRRK1-203ENST00000525395 FOXO3O43524 673 aa13.97□□□□□ -0.17
LRRK1-203ENST00000525395 MYOM2P54296 1465 aa13.96□□□□□ -0.17
LRRK1-203ENST00000525395 SAFB2Q14151 953 aaKnown RBP eCLIP13.96□□□□□ -0.17
LRRK1-203ENST00000525395 DCAF11Q8TEB1 546 aa13.96□□□□□ -0.17
LRRK1-203ENST00000525395 LAMC1P11047 1609 aa13.95□□□□□ -0.18
LRRK1-203ENST00000525395 SIRT1Q96EB6 747 aa13.95□□□□□ -0.18
LRRK1-203ENST00000525395 DHX57Q6P158 1386 aaKnown RBP13.95□□□□□ -0.18
LRRK1-203ENST00000525395 AFF2P51816 1311 aa13.94□□□□□ -0.18
LRRK1-203ENST00000525395 ADAMTS2O95450 1211 aa13.94□□□□□ -0.18
LRRK1-203ENST00000525395 CDC42BPGQ6DT37 1551 aa13.94□□□□□ -0.18
LRRK1-203ENST00000525395 C8orf37Q96NL8 207 aa13.94□□□□□ -0.18
LRRK1-203ENST00000525395 PRAM1Q96QH2 718 aa13.94□□□□□ -0.18
LRRK1-203ENST00000525395 ZNF772Q68DY9 489 aaPredicted RBP13.93□□□□□ -0.18
LRRK1-203ENST00000525395 KNDC1Q76NI1 1749 aa13.93□□□□□ -0.18
LRRK1-203ENST00000525395 TRAK1Q9UPV9 953 aa13.92□□□□□ -0.18
LRRK1-203ENST00000525395 PXDNQ92626 1479 aa13.92□□□□□ -0.18
LRRK1-203ENST00000525395 ADGRB1O14514 1584 aa13.91□□□□□ -0.18
LRRK1-203ENST00000525395 NPHP3Q7Z494 1330 aa13.9□□□□□ -0.18
LRRK1-203ENST00000525395 RXRBP28702 533 aa13.89□□□□□ -0.19
LRRK1-203ENST00000525395 NGLY1Q96IV0 654 aa13.89□□□□□ -0.19
LRRK1-203ENST00000525395 HIRIP3Q9BW71 556 aaPredicted RBP13.89□□□□□ -0.19
LRRK1-203ENST00000525395 QTRT2Q9H974 415 aaKnown RBP13.89□□□□□ -0.19
LRRK1-203ENST00000525395 POGKQ9P215 609 aa13.89□□□□□ -0.19
LRRK1-203ENST00000525395 FMN2Q9NZ56 1722 aa13.89□□□□□ -0.19
LRRK1-203ENST00000525395 RGPD8O14715 1765 aaPredicted RBP13.87□□□□□ -0.19
LRRK1-203ENST00000525395 KRT28Q7Z3Y7 464 aa13.87□□□□□ -0.19
LRRK1-203ENST00000525395 PHF8Q9UPP1 1060 aa13.87□□□□□ -0.19
LRRK1-203ENST00000525395 MINK1Q8N4C8 1332 aaPredicted RBP13.87□□□□□ -0.19
LRRK1-203ENST00000525395 PMFBP1Q8TBY8 1022 aa13.86□□□□□ -0.19
LRRK1-203ENST00000525395 SPATA31A3Q5VYP0 1347 aa13.86□□□□□ -0.19
LRRK1-203ENST00000525395 DLC1Q96QB1 1528 aa13.85□□□□□ -0.19
LRRK1-203ENST00000525395 FNBP4Q8N3X1 1017 aaPredicted RBP13.85□□□□□ -0.19
LRRK1-203ENST00000525395 COL22A1Q8NFW1 1626 aaPredicted RBP13.85□□□□□ -0.19
LRRK1-203ENST00000525395 PRR36Q9H6K5 1346 aa13.85□□□□□ -0.19
LRRK1-203ENST00000525395 PLEKHG5O94827 1062 aa13.84□□□□□ -0.19
LRRK1-203ENST00000525395 NBPF1Q3BBV0 1214 aa13.84□□□□□ -0.19
LRRK1-203ENST00000525395 CABLES1Q8TDN4 633 aa13.84□□□□□ -0.19
LRRK1-203ENST00000525395 STAC3Q96MF2 364 aa13.84□□□□□ -0.19
LRRK1-203ENST00000525395 USP21Q9UK80 565 aa13.84□□□□□ -0.19
LRRK1-203ENST00000525395 USP32Q8NFA0 1604 aa13.83□□□□□ -0.2
LRRK1-203ENST00000525395 RBM6P78332 1123 aaKnown RBP13.83□□□□□ -0.2
LRRK1-203ENST00000525395 UPF1Q92900 1129 aaKnown RBP eCLIP13.83□□□□□ -0.2
LRRK1-203ENST00000525395 SIN3AQ96ST3 1273 aa13.83□□□□□ -0.2
LRRK1-203ENST00000525395 WASLO00401 505 aaPredicted RBP13.81□□□□□ -0.2
LRRK1-203ENST00000525395 RGS12O14924 1447 aa13.81□□□□□ -0.2
LRRK1-203ENST00000525395 BCL9LQ86UU0 1499 aa13.8□□□□□ -0.2
LRRK1-203ENST00000525395 PSME1Q06323 249 aa13.8□□□□□ -0.2
LRRK1-203ENST00000525395 CDK12Q9NYV4 1490 aaPredicted RBP13.8□□□□□ -0.2
LRRK1-203ENST00000525395 KIF1AQ12756 1690 aa13.79□□□□□ -0.2
LRRK1-203ENST00000525395 TRPC5Q9UL62 973 aaPredicted RBP13.79□□□□□ -0.2
LRRK1-203ENST00000525395 ADGRB2O60241 1585 aa13.79□□□□□ -0.2
LRRK1-203ENST00000525395 LMOD2Q6P5Q4 547 aa13.78□□□□□ -0.2
LRRK1-203ENST00000525395 L3MBTL2Q969R5 705 aa13.78□□□□□ -0.2
LRRK1-203ENST00000525395 ATRNO75882 1429 aa13.78□□□□□ -0.2
LRRK1-203ENST00000525395 ANKARQ7Z5J8 1434 aa13.78□□□□□ -0.2
LRRK1-203ENST00000525395 SBNO1A3KN83 1393 aa13.77□□□□□ -0.21
LRRK1-203ENST00000525395 TNS3Q68CZ2 1445 aa13.77□□□□□ -0.21
LRRK1-203ENST00000525395 NEUROD1Q13562 356 aa13.76□□□□□ -0.21
LRRK1-203ENST00000525395 NUDT16Q96DE0 195 aaKnown RBP13.76□□□□□ -0.21
LRRK1-203ENST00000525395 CDK19Q9BWU1 502 aa13.76□□□□□ -0.21
LRRK1-203ENST00000525395 ARHGEF28Q8N1W1 1705 aaKnown RBP13.76□□□□□ -0.21
LRRK1-203ENST00000525395 TULP4Q9NRJ4 1543 aa13.75□□□□□ -0.21
LRRK1-203ENST00000525395 MARF1Q9Y4F3 1742 aaKnown RBP13.75□□□□□ -0.21
LRRK1-203ENST00000525395 SLIT2O94813 1529 aa13.74□□□□□ -0.21
LRRK1-203ENST00000525395 FAM83GA6ND36 823 aa13.74□□□□□ -0.21
LRRK1-203ENST00000525395 TRIM26Q12899 539 aaPredicted RBP13.74□□□□□ -0.21
LRRK1-203ENST00000525395 GJD4Q96KN9 370 aaPredicted RBP13.74□□□□□ -0.21
LRRK1-203ENST00000525395 HAP1P54257 671 aaPredicted RBP13.73□□□□□ -0.21
LRRK1-203ENST00000525395 UNC5CLQ8IV45 518 aa13.73□□□□□ -0.21
LRRK1-203ENST00000525395 NGDNQ8NEJ9 315 aaKnown RBP13.73□□□□□ -0.21
LRRK1-203ENST00000525395 TRPM3Q9HCF6 1732 aaPredicted RBP13.73□□□□□ -0.21
LRRK1-203ENST00000525395 ATP7BP35670 1465 aa13.72□□□□□ -0.21
LRRK1-203ENST00000525395 GPRASP1Q5JY77 1395 aa13.71□□□□□ -0.21
LRRK1-203ENST00000525395 PAK3O75914 559 aaPredicted RBP13.71□□□□□ -0.21
LRRK1-203ENST00000525395 ARHGEF10O15013 1369 aa13.71□□□□□ -0.22
LRRK1-203ENST00000525395 KIAA1210Q9ULL0 1709 aa13.7□□□□□ -0.22
LRRK1-203ENST00000525395 CABP2Q9NPB3 220 aa13.7□□□□□ -0.22
LRRK1-203ENST00000525395 EIF3AQ14152 1382 aaKnown RBP13.7□□□□□ -0.22
LRRK1-203ENST00000525395 ACEP12821 1306 aa13.69□□□□□ -0.22
LRRK1-203ENST00000525395 RALGAPBQ86X10 1494 aa13.69□□□□□ -0.22
LRRK1-203ENST00000525395 NBPF8Q3BBV2 869 aa13.69□□□□□ -0.22
LRRK1-203ENST00000525395 NUTM2GQ5VZR2 741 aa13.69□□□□□ -0.22
LRRK1-203ENST00000525395 CCDC61Q9Y6R9 512 aa13.69□□□□□ -0.22
LRRK1-203ENST00000525395 GLI3P10071 1580 aa13.69□□□□□ -0.22
LRRK1-203ENST00000525395 ABCA3Q99758 1704 aa13.69□□□□□ -0.22
LRRK1-203ENST00000525395 ALS2Q96Q42 1657 aa13.69□□□□□ -0.22
LRRK1-203ENST00000525395 PLEKHG3A1L390 1219 aa13.68□□□□□ -0.22
LRRK1-203ENST00000525395 CENPJQ9HC77 1338 aaPredicted RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms