RNA–Protein interactions for RNA: ENST00000525375.1

GPATCH4-212, Transcript of G-patch domain containing 4, humanhuman

TSL 3

Gene GPATCH4, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-212ENST00000525375 SAFB2Q14151 953 aaKnown RBP eCLIP17.17■□□□□ 0.34
GPATCH4-212ENST00000525375 PRAM1Q96QH2 718 aa17.17■□□□□ 0.34
GPATCH4-212ENST00000525375 HSPA1LP34931 641 aa17.16■□□□□ 0.34
GPATCH4-212ENST00000525375 FMN2Q9NZ56 1722 aa17.16■□□□□ 0.34
GPATCH4-212ENST00000525375 ADGRB2O60241 1585 aa17.15■□□□□ 0.34
GPATCH4-212ENST00000525375 ATF3P18847 181 aa17.14■□□□□ 0.33
GPATCH4-212ENST00000525375 CCER1Q8TC90 406 aaPredicted RBP17.14■□□□□ 0.33
GPATCH4-212ENST00000525375 SLAIN2Q9P270 581 aa17.14■□□□□ 0.33
GPATCH4-212ENST00000525375 C1orf167Q5SNV9 1468 aa17.13■□□□□ 0.33
GPATCH4-212ENST00000525375 RALGAPBQ86X10 1494 aa17.13■□□□□ 0.33
GPATCH4-212ENST00000525375 CADPS2Q86UW7 1296 aa17.13■□□□□ 0.33
GPATCH4-212ENST00000525375 USP32Q8NFA0 1604 aa17.13■□□□□ 0.33
GPATCH4-212ENST00000525375 SIRT1Q96EB6 747 aa17.12■□□□□ 0.33
GPATCH4-212ENST00000525375 CLSPNQ9HAW4 1339 aa17.12■□□□□ 0.33
GPATCH4-212ENST00000525375 BRINP3Q76B58 766 aa17.11■□□□□ 0.33
GPATCH4-212ENST00000525375 HIRIP3Q9BW71 556 aaPredicted RBP17.11■□□□□ 0.33
GPATCH4-212ENST00000525375 ROCK2O75116 1388 aaKnown RBP17.11■□□□□ 0.33
GPATCH4-212ENST00000525375 GPRASP1Q5JY77 1395 aa17.11■□□□□ 0.33
GPATCH4-212ENST00000525375 COL16A1Q07092 1604 aaPredicted RBP17.1■□□□□ 0.33
GPATCH4-212ENST00000525375 NHSL1Q5SYE7 1610 aa17.1■□□□□ 0.33
GPATCH4-212ENST00000525375 NUTM2FA1L443 756 aa17.1■□□□□ 0.33
GPATCH4-212ENST00000525375 AHDC1Q5TGY3 1603 aaPredicted RBP17.1■□□□□ 0.33
GPATCH4-212ENST00000525375 QRICH2Q9H0J4 1663 aa17.1■□□□□ 0.33
GPATCH4-212ENST00000525375 PHLPP1O60346 1717 aa17.1■□□□□ 0.33
GPATCH4-212ENST00000525375 DDX17Q92841 729 aaKnown RBP17.09■□□□□ 0.33
GPATCH4-212ENST00000525375 POGKQ9P215 609 aa17.09■□□□□ 0.33
GPATCH4-212ENST00000525375 MINK1Q8N4C8 1332 aaPredicted RBP17.09■□□□□ 0.33
GPATCH4-212ENST00000525375 RGPD8O14715 1765 aaPredicted RBP17.09■□□□□ 0.33
GPATCH4-212ENST00000525375 ORAI2Q96SN7 254 aa17.08■□□□□ 0.32
GPATCH4-212ENST00000525375 TULP4Q9NRJ4 1543 aa17.06■□□□□ 0.32
GPATCH4-212ENST00000525375 PRR36Q9H6K5 1346 aa17.04■□□□□ 0.32
GPATCH4-212ENST00000525375 ATP7BP35670 1465 aa17.03■□□□□ 0.32
GPATCH4-212ENST00000525375 CENPJQ9HC77 1338 aaPredicted RBP17.02■□□□□ 0.32
GPATCH4-212ENST00000525375 TOPAZ1Q8N9V7 1692 aa17.01■□□□□ 0.31
GPATCH4-212ENST00000525375 CARD11Q9BXL7 1154 aa17.01■□□□□ 0.31
GPATCH4-212ENST00000525375 WASLO00401 505 aaPredicted RBP17■□□□□ 0.31
GPATCH4-212ENST00000525375 ESCO1Q5FWF5 840 aa17■□□□□ 0.31
GPATCH4-212ENST00000525375 PXDNQ92626 1479 aa16.99■□□□□ 0.31
GPATCH4-212ENST00000525375 ANKARQ7Z5J8 1434 aa16.99■□□□□ 0.31
GPATCH4-212ENST00000525375 KIF1AQ12756 1690 aa16.99■□□□□ 0.31
GPATCH4-212ENST00000525375 XPCQ01831 940 aaPredicted RBP16.97■□□□□ 0.31
GPATCH4-212ENST00000525375 TIMELESSQ9UNS1 1208 aa16.97■□□□□ 0.31
GPATCH4-212ENST00000525375 MED1Q15648 1581 aaPredicted RBP16.97■□□□□ 0.31
GPATCH4-212ENST00000525375 CDK19Q9BWU1 502 aa16.96■□□□□ 0.31
GPATCH4-212ENST00000525375 SHPRHQ149N8 1683 aa16.96■□□□□ 0.31
GPATCH4-212ENST00000525375 EIF3AQ14152 1382 aaKnown RBP16.95■□□□□ 0.3
GPATCH4-212ENST00000525375 ITSN1Q15811 1721 aa16.95■□□□□ 0.3
GPATCH4-212ENST00000525375 LRP6O75581 1613 aa16.95■□□□□ 0.3
GPATCH4-212ENST00000525375 FOXO3O43524 673 aa16.94■□□□□ 0.3
GPATCH4-212ENST00000525375 PMFBP1Q8TBY8 1022 aa16.94■□□□□ 0.3
GPATCH4-212ENST00000525375 CABP2Q9NPB3 220 aa16.94■□□□□ 0.3
GPATCH4-212ENST00000525375 SOS2Q07890 1332 aaPredicted RBP16.94■□□□□ 0.3
GPATCH4-212ENST00000525375 NUDT16Q96DE0 195 aaKnown RBP16.93■□□□□ 0.3
GPATCH4-212ENST00000525375 PHF8Q9UPP1 1060 aa16.93■□□□□ 0.3
GPATCH4-212ENST00000525375 TRPM3Q9HCF6 1732 aaPredicted RBP16.93■□□□□ 0.3
GPATCH4-212ENST00000525375 USP47Q96K76 1375 aa16.92■□□□□ 0.3
GPATCH4-212ENST00000525375 JCADQ9P266 1359 aa16.92■□□□□ 0.3
GPATCH4-212ENST00000525375 PNPLA6Q8IY17 1366 aa16.91■□□□□ 0.3
GPATCH4-212ENST00000525375 SBNO2Q9Y2G9 1366 aa16.9■□□□□ 0.3
GPATCH4-212ENST00000525375 ST20-MTHFSA0A0A6YYL1 179 aa16.9■□□□□ 0.3
GPATCH4-212ENST00000525375 TESK2Q96S53 571 aa16.9■□□□□ 0.3
GPATCH4-212ENST00000525375 NPHP3Q7Z494 1330 aa16.9■□□□□ 0.3
GPATCH4-212ENST00000525375 SRPK2P78362 688 aaKnown RBP16.89■□□□□ 0.29
GPATCH4-212ENST00000525375 COL22A1Q8NFW1 1626 aaPredicted RBP16.88■□□□□ 0.29
GPATCH4-212ENST00000525375 PPIP5K1Q6PFW1 1433 aa16.88■□□□□ 0.29
GPATCH4-212ENST00000525375 DISP3Q9P2K9 1392 aa16.87■□□□□ 0.29
GPATCH4-212ENST00000525375 ALS2Q96Q42 1657 aa16.86■□□□□ 0.29
GPATCH4-212ENST00000525375 KRT28Q7Z3Y7 464 aa16.86■□□□□ 0.29
GPATCH4-212ENST00000525375 EVC2Q86UK5 1308 aa16.86■□□□□ 0.29
GPATCH4-212ENST00000525375 ABCA3Q99758 1704 aa16.85■□□□□ 0.29
GPATCH4-212ENST00000525375 POLR3AO14802 1390 aaPredicted RBP16.85■□□□□ 0.29
GPATCH4-212ENST00000525375 TNS3Q68CZ2 1445 aa16.85■□□□□ 0.29
GPATCH4-212ENST00000525375 LRRC59Q96AG4 307 aaKnown RBP16.84■□□□□ 0.29
GPATCH4-212ENST00000525375 ACEP12821 1306 aa16.84■□□□□ 0.29
GPATCH4-212ENST00000525375 SPATA31A3Q5VYP0 1347 aa16.83■□□□□ 0.28
GPATCH4-212ENST00000525375 CRYBG1Q9Y4K1 1723 aa16.83■□□□□ 0.28
GPATCH4-212ENST00000525375 CCDC61Q9Y6R9 512 aa16.83■□□□□ 0.28
GPATCH4-212ENST00000525375 AKAP12Q02952 1782 aa16.82■□□□□ 0.28
GPATCH4-212ENST00000525375 NRKQ7Z2Y5 1582 aa16.82■□□□□ 0.28
GPATCH4-212ENST00000525375 CD163L1Q9NR16 1453 aa16.82■□□□□ 0.28
GPATCH4-212ENST00000525375 PLEKHG3A1L390 1219 aa16.82■□□□□ 0.28
GPATCH4-212ENST00000525375 NGDNQ8NEJ9 315 aaKnown RBP16.82■□□□□ 0.28
GPATCH4-212ENST00000525375 CABP1Q9NZU7 370 aa16.82■□□□□ 0.28
GPATCH4-212ENST00000525375 SBNO1A3KN83 1393 aa16.81■□□□□ 0.28
GPATCH4-212ENST00000525375 NUTM2BA6NNL0 878 aaPredicted RBP16.81■□□□□ 0.28
GPATCH4-212ENST00000525375 NUTM2EB1AL46 878 aaPredicted RBP16.81■□□□□ 0.28
GPATCH4-212ENST00000525375 NUTM2AQ8IVF1 878 aaPredicted RBP16.81■□□□□ 0.28
GPATCH4-212ENST00000525375 SPATA31A6Q5VVP1 1343 aa16.8■□□□□ 0.28
GPATCH4-212ENST00000525375 PSME1Q06323 249 aa16.8■□□□□ 0.28
GPATCH4-212ENST00000525375 MYOM1P52179 1685 aa16.79■□□□□ 0.28
GPATCH4-212ENST00000525375 PLEKHG5O94827 1062 aa16.79■□□□□ 0.28
GPATCH4-212ENST00000525375 HSPA5P11021 654 aaKnown RBP16.79■□□□□ 0.28
GPATCH4-212ENST00000525375 MON2Q7Z3U7 1717 aa16.79■□□□□ 0.28
GPATCH4-212ENST00000525375 ATAD2Q6PL18 1390 aa16.78■□□□□ 0.28
GPATCH4-212ENST00000525375 RGS17Q9UGC6 210 aaPredicted RBP16.78■□□□□ 0.28
GPATCH4-212ENST00000525375 USP6P35125 1406 aa16.78■□□□□ 0.28
GPATCH4-212ENST00000525375 SSH2Q76I76 1423 aa16.78■□□□□ 0.28
GPATCH4-212ENST00000525375 CABLES1Q8TDN4 633 aa16.77■□□□□ 0.28
GPATCH4-212ENST00000525375 PIK3C2AO00443 1686 aa16.77■□□□□ 0.28
GPATCH4-212ENST00000525375 CPSF1Q10570 1443 aaKnown RBP16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 139.1 ms