RNA–Protein interactions for RNA: ENST00000525303.5

TRAPPC4-206, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 654 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-206ENST00000525303 SLC4A1APQ9BWU0 796 aaKnown RBP14.43□□□□□ -0.1
TRAPPC4-206ENST00000525303 RPGRIP1LQ68CZ1 1315 aa14.42□□□□□ -0.1
TRAPPC4-206ENST00000525303 KNDC1Q76NI1 1749 aa14.41□□□□□ -0.1
TRAPPC4-206ENST00000525303 RGPD8O14715 1765 aaPredicted RBP14.41□□□□□ -0.1
TRAPPC4-206ENST00000525303 EP400Q96L91 3159 aa14.4□□□□□ -0.1
TRAPPC4-206ENST00000525303 FMN2Q9NZ56 1722 aa14.38□□□□□ -0.11
TRAPPC4-206ENST00000525303 USP21Q9UK80 565 aa14.38□□□□□ -0.11
TRAPPC4-206ENST00000525303 PXDNQ92626 1479 aa14.38□□□□□ -0.11
TRAPPC4-206ENST00000525303 ESCO1Q5FWF5 840 aa14.37□□□□□ -0.11
TRAPPC4-206ENST00000525303 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.37□□□□□ -0.11
TRAPPC4-206ENST00000525303 MYOM2P54296 1465 aa14.37□□□□□ -0.11
TRAPPC4-206ENST00000525303 CCDC144AA2RUR9 1427 aa14.36□□□□□ -0.11
TRAPPC4-206ENST00000525303 TRPC5Q9UL62 973 aaPredicted RBP14.36□□□□□ -0.11
TRAPPC4-206ENST00000525303 NPHP3Q7Z494 1330 aa14.36□□□□□ -0.11
TRAPPC4-206ENST00000525303 ADGRF5Q8IZF2 1346 aa14.36□□□□□ -0.11
TRAPPC4-206ENST00000525303 KIF1AQ12756 1690 aa14.36□□□□□ -0.11
TRAPPC4-206ENST00000525303 ATRNO75882 1429 aa14.35□□□□□ -0.11
TRAPPC4-206ENST00000525303 FNBP4Q8N3X1 1017 aaPredicted RBP14.35□□□□□ -0.11
TRAPPC4-206ENST00000525303 ATAD2Q6PL18 1390 aa14.34□□□□□ -0.11
TRAPPC4-206ENST00000525303 SRCAPQ6ZRS2 3230 aa14.34□□□□□ -0.11
TRAPPC4-206ENST00000525303 BRWD3Q6RI45 1802 aa14.34□□□□□ -0.11
TRAPPC4-206ENST00000525303 TECPR2O15040 1411 aa14.34□□□□□ -0.11
TRAPPC4-206ENST00000525303 SPATA31E1Q6ZUB1 1445 aa14.34□□□□□ -0.11
TRAPPC4-206ENST00000525303 XPCQ01831 940 aaPredicted RBP14.34□□□□□ -0.11
TRAPPC4-206ENST00000525303 RGL3Q3MIN7 710 aa14.34□□□□□ -0.11
TRAPPC4-206ENST00000525303 STK26Q9P289 416 aa14.34□□□□□ -0.11
TRAPPC4-206ENST00000525303 NUTM2FA1L443 756 aa14.33□□□□□ -0.12
TRAPPC4-206ENST00000525303 FOXO3O43524 673 aa14.33□□□□□ -0.12
TRAPPC4-206ENST00000525303 WAPLQ7Z5K2 1190 aa14.33□□□□□ -0.12
TRAPPC4-206ENST00000525303 LRPPRCP42704 1394 aaKnown RBP14.32□□□□□ -0.12
TRAPPC4-206ENST00000525303 ANKRD30BQ9BXX2 1392 aa14.32□□□□□ -0.12
TRAPPC4-206ENST00000525303 BCL9LQ86UU0 1499 aa14.31□□□□□ -0.12
TRAPPC4-206ENST00000525303 TMEM132EQ6IEE7 984 aa14.31□□□□□ -0.12
TRAPPC4-206ENST00000525303 PLEKHH1Q9ULM0 1364 aa14.31□□□□□ -0.12
TRAPPC4-206ENST00000525303 PIK3C2GO75747 1445 aa14.31□□□□□ -0.12
TRAPPC4-206ENST00000525303 ABCA3Q99758 1704 aa14.3□□□□□ -0.12
TRAPPC4-206ENST00000525303 ABCC11Q96J66 1382 aa14.3□□□□□ -0.12
TRAPPC4-206ENST00000525303 USP32Q8NFA0 1604 aa14.3□□□□□ -0.12
TRAPPC4-206ENST00000525303 MPHOSPH9Q99550 1183 aa14.29□□□□□ -0.12
TRAPPC4-206ENST00000525303 YTHDC2Q9H6S0 1430 aaKnown RBP14.29□□□□□ -0.12
TRAPPC4-206ENST00000525303 PLCH1Q4KWH8 1693 aa14.29□□□□□ -0.12
TRAPPC4-206ENST00000525303 GLI3P10071 1580 aa14.28□□□□□ -0.12
TRAPPC4-206ENST00000525303 NWD2Q9ULI1 1742 aa14.27□□□□□ -0.12
TRAPPC4-206ENST00000525303 SPATA31A3Q5VYP0 1347 aa14.26□□□□□ -0.13
TRAPPC4-206ENST00000525303 GJD4Q96KN9 370 aaPredicted RBP14.26□□□□□ -0.13
TRAPPC4-206ENST00000525303 SLIT2O94813 1529 aa14.25□□□□□ -0.13
TRAPPC4-206ENST00000525303 RALGAPBQ86X10 1494 aa14.25□□□□□ -0.13
TRAPPC4-206ENST00000525303 NRXN1Q9ULB1 1477 aa14.24□□□□□ -0.13
TRAPPC4-206ENST00000525303 KRT28Q7Z3Y7 464 aa14.23□□□□□ -0.13
TRAPPC4-206ENST00000525303 UNC5CLQ8IV45 518 aa14.23□□□□□ -0.13
TRAPPC4-206ENST00000525303 TNS3Q68CZ2 1445 aa14.23□□□□□ -0.13
TRAPPC4-206ENST00000525303 CCDC125Q86Z20 511 aa14.22□□□□□ -0.13
TRAPPC4-206ENST00000525303 C14orf93Q9H972 538 aaKnown RBP14.22□□□□□ -0.13
TRAPPC4-206ENST00000525303 ZRANB1Q9UGI0 708 aa14.22□□□□□ -0.13
TRAPPC4-206ENST00000525303 SIRT1Q96EB6 747 aa14.21□□□□□ -0.13
TRAPPC4-206ENST00000525303 PHF8Q9UPP1 1060 aa14.21□□□□□ -0.13
TRAPPC4-206ENST00000525303 TRPM3Q9HCF6 1732 aaPredicted RBP14.21□□□□□ -0.14
TRAPPC4-206ENST00000525303 DHX57Q6P158 1386 aaKnown RBP14.21□□□□□ -0.14
TRAPPC4-206ENST00000525303 PLEKHG5O94827 1062 aa14.2□□□□□ -0.14
TRAPPC4-206ENST00000525303 HAP1P54257 671 aaPredicted RBP14.2□□□□□ -0.14
TRAPPC4-206ENST00000525303 CFAP70Q5T0N1 1121 aa14.2□□□□□ -0.14
TRAPPC4-206ENST00000525303 NRAPQ86VF7 1730 aa14.2□□□□□ -0.14
TRAPPC4-206ENST00000525303 ADGRB2O60241 1585 aa14.19□□□□□ -0.14
TRAPPC4-206ENST00000525303 PSME1Q06323 249 aa14.19□□□□□ -0.14
TRAPPC4-206ENST00000525303 SAFB2Q14151 953 aaKnown RBP eCLIP14.19□□□□□ -0.14
TRAPPC4-206ENST00000525303 CABLES1Q8TDN4 633 aa14.19□□□□□ -0.14
TRAPPC4-206ENST00000525303 ALS2Q96Q42 1657 aa14.19□□□□□ -0.14
TRAPPC4-206ENST00000525303 DLC1Q96QB1 1528 aa14.19□□□□□ -0.14
TRAPPC4-206ENST00000525303 PRAM1Q96QH2 718 aa14.18□□□□□ -0.14
TRAPPC4-206ENST00000525303 BLMP54132 1417 aaPredicted RBP14.17□□□□□ -0.14
TRAPPC4-206ENST00000525303 LMOD2Q6P5Q4 547 aa14.17□□□□□ -0.14
TRAPPC4-206ENST00000525303 CRYBG1Q9Y4K1 1723 aa14.17□□□□□ -0.14
TRAPPC4-206ENST00000525303 SBNO1A3KN83 1393 aa14.17□□□□□ -0.14
TRAPPC4-206ENST00000525303 ADGRB1O14514 1584 aa14.17□□□□□ -0.14
TRAPPC4-206ENST00000525303 ITSN1Q15811 1721 aa14.16□□□□□ -0.14
TRAPPC4-206ENST00000525303 VPS72Q15906 364 aa14.16□□□□□ -0.14
TRAPPC4-206ENST00000525303 SEPT12Q8IYM1 358 aa14.16□□□□□ -0.14
TRAPPC4-206ENST00000525303 PMFBP1Q8TBY8 1022 aa14.16□□□□□ -0.14
TRAPPC4-206ENST00000525303 ARHGEF10O15013 1369 aa14.16□□□□□ -0.14
TRAPPC4-206ENST00000525303 ACIN1Q9UKV3 1341 aaKnown RBP14.15□□□□□ -0.14
TRAPPC4-206ENST00000525303 ANKARQ7Z5J8 1434 aa14.15□□□□□ -0.14
TRAPPC4-206ENST00000525303 COL14A1Q05707 1796 aaKnown RBP14.15□□□□□ -0.14
TRAPPC4-206ENST00000525303 POGKQ9P215 609 aa14.15□□□□□ -0.14
TRAPPC4-206ENST00000525303 CCDC9Q9Y3X0 531 aaKnown RBP14.15□□□□□ -0.14
TRAPPC4-206ENST00000525303 ARHGEF28Q8N1W1 1705 aaKnown RBP14.14□□□□□ -0.15
TRAPPC4-206ENST00000525303 DEFB132Q7Z7B7 95 aa14.13□□□□□ -0.15
TRAPPC4-206ENST00000525303 RGPD1P0DJD0 1748 aa14.12□□□□□ -0.15
TRAPPC4-206ENST00000525303 SF3B2Q13435 895 aaKnown RBP14.12□□□□□ -0.15
TRAPPC4-206ENST00000525303 HIRIP3Q9BW71 556 aaPredicted RBP14.12□□□□□ -0.15
TRAPPC4-206ENST00000525303 RAB3GAP2Q9H2M9 1393 aa14.11□□□□□ -0.15
TRAPPC4-206ENST00000525303 TULP4Q9NRJ4 1543 aa14.11□□□□□ -0.15
TRAPPC4-206ENST00000525303 FAM83GA6ND36 823 aa14.11□□□□□ -0.15
TRAPPC4-206ENST00000525303 ONECUT3O60422 494 aaPredicted RBP14.11□□□□□ -0.15
TRAPPC4-206ENST00000525303 KRT27Q7Z3Y8 459 aa14.11□□□□□ -0.15
TRAPPC4-206ENST00000525303 TRAK1Q9UPV9 953 aa14.11□□□□□ -0.15
TRAPPC4-206ENST00000525303 MINK1Q8N4C8 1332 aaPredicted RBP14.1□□□□□ -0.15
TRAPPC4-206ENST00000525303 LRP5O75197 1615 aa14.09□□□□□ -0.15
TRAPPC4-206ENST00000525303 PHRF1Q9P1Y6 1649 aaKnown RBP14.09□□□□□ -0.15
TRAPPC4-206ENST00000525303 A0A0G2JS52 829 aa14.09□□□□□ -0.15
TRAPPC4-206ENST00000525303 MYT1Q01538 1121 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms