RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 CCDC144AA2RUR9 1427 aa35.91■■■■□ 3.34
USP47-205ENST00000525257 RGL3Q3MIN7 710 aa35.89■■■■□ 3.34
USP47-205ENST00000525257 COL22A1Q8NFW1 1626 aaPredicted RBP35.88■■■■□ 3.33
USP47-205ENST00000525257 ESCO1Q5FWF5 840 aa35.87■■■■□ 3.33
USP47-205ENST00000525257 IFT172Q9UG01 1749 aa35.87■■■■□ 3.33
USP47-205ENST00000525257 STK26Q9P289 416 aa35.86■■■■□ 3.33
USP47-205ENST00000525257 SPATA31E1Q6ZUB1 1445 aa35.85■■■■□ 3.33
USP47-205ENST00000525257 USP21Q9UK80 565 aa35.85■■■■□ 3.33
USP47-205ENST00000525257 NPHP3Q7Z494 1330 aa35.83■■■■□ 3.33
USP47-205ENST00000525257 PXDNQ92626 1479 aa35.82■■■■□ 3.32
USP47-205ENST00000525257 WAPLQ7Z5K2 1190 aa35.82■■■■□ 3.32
USP47-205ENST00000525257 TECPR2O15040 1411 aa35.82■■■■□ 3.32
USP47-205ENST00000525257 ANKRD30BQ9BXX2 1392 aa35.81■■■■□ 3.32
USP47-205ENST00000525257 LRPPRCP42704 1394 aaKnown RBP35.8■■■■□ 3.32
USP47-205ENST00000525257 MPHOSPH9Q99550 1183 aa35.8■■■■□ 3.32
USP47-205ENST00000525257 MYOM2P54296 1465 aa35.8■■■■□ 3.32
USP47-205ENST00000525257 NUTM2FA1L443 756 aa35.79■■■■□ 3.32
USP47-205ENST00000525257 XPCQ01831 940 aaPredicted RBP35.79■■■■□ 3.32
USP47-205ENST00000525257 KNDC1Q76NI1 1749 aa35.79■■■■□ 3.32
USP47-205ENST00000525257 TMEM132EQ6IEE7 984 aa35.78■■■■□ 3.32
USP47-205ENST00000525257 FNBP4Q8N3X1 1017 aaPredicted RBP35.78■■■■□ 3.32
USP47-205ENST00000525257 TRPC5Q9UL62 973 aaPredicted RBP35.78■■■■□ 3.32
USP47-205ENST00000525257 FOXO3O43524 673 aa35.77■■■■□ 3.32
USP47-205ENST00000525257 PLEKHH1Q9ULM0 1364 aa35.76■■■■□ 3.32
USP47-205ENST00000525257 PIK3C2GO75747 1445 aa35.75■■■■□ 3.31
USP47-205ENST00000525257 ATRNO75882 1429 aa35.74■■■■□ 3.31
USP47-205ENST00000525257 ABCC11Q96J66 1382 aa35.74■■■■□ 3.31
USP47-205ENST00000525257 MARF1Q9Y4F3 1742 aaKnown RBP35.74■■■■□ 3.31
USP47-205ENST00000525257 FMN2Q9NZ56 1722 aa35.71■■■■□ 3.31
USP47-205ENST00000525257 ATAD2Q6PL18 1390 aa35.71■■■■□ 3.31
USP47-205ENST00000525257 YTHDC2Q9H6S0 1430 aaKnown RBP35.69■■■■□ 3.3
USP47-205ENST00000525257 BCL9LQ86UU0 1499 aa35.66■■■■□ 3.3
USP47-205ENST00000525257 KIF1AQ12756 1690 aa35.65■■■■□ 3.3
USP47-205ENST00000525257 SPATA31A3Q5VYP0 1347 aa35.58■■■■□ 3.29
USP47-205ENST00000525257 EP400Q96L91 3159 aa35.58■■■■□ 3.29
USP47-205ENST00000525257 RGPD8O14715 1765 aaPredicted RBP35.57■■■■□ 3.28
USP47-205ENST00000525257 C14orf93Q9H972 538 aaKnown RBP35.57■■■■□ 3.28
USP47-205ENST00000525257 NRXN1Q9ULB1 1477 aa35.56■■■■□ 3.28
USP47-205ENST00000525257 TNKS1BP1Q9C0C2 1729 aaKnown RBP35.56■■■■□ 3.28
USP47-205ENST00000525257 KRT28Q7Z3Y7 464 aa35.55■■■■□ 3.28
USP47-205ENST00000525257 SIRT1Q96EB6 747 aa35.55■■■■□ 3.28
USP47-205ENST00000525257 GJD4Q96KN9 370 aaPredicted RBP35.55■■■■□ 3.28
USP47-205ENST00000525257 CFAP70Q5T0N1 1121 aa35.54■■■■□ 3.28
USP47-205ENST00000525257 DHX57Q6P158 1386 aaKnown RBP35.52■■■■□ 3.28
USP47-205ENST00000525257 USP32Q8NFA0 1604 aa35.52■■■■□ 3.28
USP47-205ENST00000525257 SAFB2Q14151 953 aaKnown RBP eCLIP35.5■■■■□ 3.27
USP47-205ENST00000525257 PHF8Q9UPP1 1060 aa35.5■■■■□ 3.27
USP47-205ENST00000525257 SLIT2O94813 1529 aa35.5■■■■□ 3.27
USP47-205ENST00000525257 UNC5CLQ8IV45 518 aa35.49■■■■□ 3.27
USP47-205ENST00000525257 ACIN1Q9UKV3 1341 aaKnown RBP35.49■■■■□ 3.27
USP47-205ENST00000525257 TNS3Q68CZ2 1445 aa35.49■■■■□ 3.27
USP47-205ENST00000525257 GLI3P10071 1580 aa35.48■■■■□ 3.27
USP47-205ENST00000525257 PRAM1Q96QH2 718 aa35.48■■■■□ 3.27
USP47-205ENST00000525257 SRCAPQ6ZRS2 3230 aa35.47■■■■□ 3.27
USP47-205ENST00000525257 RALGAPBQ86X10 1494 aa35.47■■■■□ 3.27
USP47-205ENST00000525257 PLEKHG5O94827 1062 aa35.45■■■■□ 3.27
USP47-205ENST00000525257 HAP1P54257 671 aaPredicted RBP35.45■■■■□ 3.27
USP47-205ENST00000525257 PSME1Q06323 249 aa35.44■■■■□ 3.26
USP47-205ENST00000525257 CABLES1Q8TDN4 633 aa35.43■■■■□ 3.26
USP47-205ENST00000525257 DLC1Q96QB1 1528 aa35.41■■■■□ 3.26
USP47-205ENST00000525257 ABCA3Q99758 1704 aa35.4■■■■□ 3.26
USP47-205ENST00000525257 RAB3GAP2Q9H2M9 1393 aa35.4■■■■□ 3.26
USP47-205ENST00000525257 POGKQ9P215 609 aa35.4■■■■□ 3.26
USP47-205ENST00000525257 LMOD2Q6P5Q4 547 aa35.39■■■■□ 3.26
USP47-205ENST00000525257 CCDC125Q86Z20 511 aa35.39■■■■□ 3.26
USP47-205ENST00000525257 PLCH1Q4KWH8 1693 aa35.39■■■■□ 3.26
USP47-205ENST00000525257 SBNO1A3KN83 1393 aa35.38■■■■□ 3.26
USP47-205ENST00000525257 ZRANB1Q9UGI0 708 aa35.37■■■■□ 3.25
USP47-205ENST00000525257 BRWD3Q6RI45 1802 aa35.36■■■■□ 3.25
USP47-205ENST00000525257 ADGRB2O60241 1585 aa35.36■■■■□ 3.25
USP47-205ENST00000525257 PMFBP1Q8TBY8 1022 aa35.36■■■■□ 3.25
USP47-205ENST00000525257 ADGRB1O14514 1584 aa35.35■■■■□ 3.25
USP47-205ENST00000525257 ANKARQ7Z5J8 1434 aa35.35■■■■□ 3.25
USP47-205ENST00000525257 ARHGEF10O15013 1369 aa35.34■■■■□ 3.25
USP47-205ENST00000525257 NWD2Q9ULI1 1742 aa35.34■■■■□ 3.25
USP47-205ENST00000525257 VPS72Q15906 364 aa35.31■■■■□ 3.24
USP47-205ENST00000525257 TRAK1Q9UPV9 953 aa35.31■■■■□ 3.24
USP47-205ENST00000525257 HIRIP3Q9BW71 556 aaPredicted RBP35.3■■■■□ 3.24
USP47-205ENST00000525257 CCDC9Q9Y3X0 531 aaKnown RBP35.3■■■■□ 3.24
USP47-205ENST00000525257 SEPT12Q8IYM1 358 aa35.29■■■■□ 3.24
USP47-205ENST00000525257 BLMP54132 1417 aaPredicted RBP35.28■■■■□ 3.24
USP47-205ENST00000525257 TRPM3Q9HCF6 1732 aaPredicted RBP35.27■■■■□ 3.24
USP47-205ENST00000525257 KDM2AQ9Y2K7 1162 aa35.27■■■■□ 3.24
USP47-205ENST00000525257 MINK1Q8N4C8 1332 aaPredicted RBP35.27■■■■□ 3.24
USP47-205ENST00000525257 FAM83GA6ND36 823 aa35.23■■■■□ 3.23
USP47-205ENST00000525257 DCAF11Q8TEB1 546 aa35.23■■■■□ 3.23
USP47-205ENST00000525257 PRR36Q9H6K5 1346 aa35.22■■■■□ 3.23
USP47-205ENST00000525257 TULP4Q9NRJ4 1543 aa35.22■■■■□ 3.23
USP47-205ENST00000525257 ALS2Q96Q42 1657 aa35.21■■■■□ 3.23
USP47-205ENST00000525257 EIF3AQ14152 1382 aaKnown RBP35.21■■■■□ 3.23
USP47-205ENST00000525257 GPRASP1Q5JY77 1395 aa35.2■■■■□ 3.23
USP47-205ENST00000525257 NRAPQ86VF7 1730 aa35.2■■■■□ 3.23
USP47-205ENST00000525257 DEFB132Q7Z7B7 95 aa35.19■■■■□ 3.22
USP47-205ENST00000525257 ONECUT3O60422 494 aaPredicted RBP35.18■■■■□ 3.22
USP47-205ENST00000525257 WASLO00401 505 aaPredicted RBP35.16■■■■□ 3.22
USP47-205ENST00000525257 SF3B2Q13435 895 aaKnown RBP35.16■■■■□ 3.22
USP47-205ENST00000525257 KRT27Q7Z3Y8 459 aa35.16■■■■□ 3.22
USP47-205ENST00000525257 A0A0G2JS52 829 aa35.15■■■■□ 3.22
USP47-205ENST00000525257 MYT1Q01538 1121 aa35.15■■■■□ 3.22
USP47-205ENST00000525257 BTG4Q9NY30 223 aa35.14■■■■□ 3.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms