RNA–Protein interactions for RNA: ENST00000524895.5

TSPAN4-213, Transcript of tetraspanin 4, humanhuman

TSL 4

Gene TSPAN4, Length 401 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-213ENST00000524895 DISP3Q9P2K9 1392 aa22.1■■□□□ 1.13
TSPAN4-213ENST00000524895 TULP4Q9NRJ4 1543 aa22.08■■□□□ 1.13
TSPAN4-213ENST00000524895 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.08■■□□□ 1.12
TSPAN4-213ENST00000524895 ADGRB2O60241 1585 aa22.08■■□□□ 1.12
TSPAN4-213ENST00000524895 KIF7Q2M1P5 1343 aa22.06■■□□□ 1.12
TSPAN4-213ENST00000524895 EVC2Q86UK5 1308 aa22.06■■□□□ 1.12
TSPAN4-213ENST00000524895 ZNF335Q9H4Z2 1342 aaPredicted RBP22.06■■□□□ 1.12
TSPAN4-213ENST00000524895 C11orf95C9JLR9 678 aaPredicted RBP22.06■■□□□ 1.12
TSPAN4-213ENST00000524895 CCDC7Q96M83 1385 aa22.06■■□□□ 1.12
TSPAN4-213ENST00000524895 WASHC2AQ641Q2 1341 aa22.06■■□□□ 1.12
TSPAN4-213ENST00000524895 CDCA8Q53HL2 280 aa22.05■■□□□ 1.12
TSPAN4-213ENST00000524895 PROSER2Q86WR7 435 aaPredicted RBP22.05■■□□□ 1.12
TSPAN4-213ENST00000524895 NALCNQ8IZF0 1738 aa22.04■■□□□ 1.12
TSPAN4-213ENST00000524895 POLR3GLQ9BT43 218 aa22.04■■□□□ 1.12
TSPAN4-213ENST00000524895 ADGRL3Q9HAR2 1447 aa22.02■■□□□ 1.12
TSPAN4-213ENST00000524895 C14orf37Q86TY3 774 aa22.01■■□□□ 1.11
TSPAN4-213ENST00000524895 RBM33Q96EV2 1170 aaKnown RBP22.01■■□□□ 1.11
TSPAN4-213ENST00000524895 TMEM94Q12767 1356 aa22■■□□□ 1.11
TSPAN4-213ENST00000524895 SRPK2P78362 688 aaKnown RBP22■■□□□ 1.11
TSPAN4-213ENST00000524895 CDC42BPGQ6DT37 1551 aa21.99■■□□□ 1.11
TSPAN4-213ENST00000524895 WASLO00401 505 aaPredicted RBP21.99■■□□□ 1.11
TSPAN4-213ENST00000524895 LRRC7Q96NW7 1537 aa21.99■■□□□ 1.11
TSPAN4-213ENST00000524895 NCOA3Q9Y6Q9 1424 aa21.98■■□□□ 1.11
TSPAN4-213ENST00000524895 CDK19Q9BWU1 502 aa21.98■■□□□ 1.11
TSPAN4-213ENST00000524895 CABP2Q9NPB3 220 aa21.97■■□□□ 1.11
TSPAN4-213ENST00000524895 PUS7Q96PZ0 661 aaKnown RBP21.95■■□□□ 1.1
TSPAN4-213ENST00000524895 ATAD2Q6PL18 1390 aa21.95■■□□□ 1.1
TSPAN4-213ENST00000524895 FMN2Q9NZ56 1722 aa21.94■■□□□ 1.1
TSPAN4-213ENST00000524895 MYOM1P52179 1685 aa21.94■■□□□ 1.1
TSPAN4-213ENST00000524895 XIRP1Q702N8 1843 aaKnown RBP21.94■■□□□ 1.1
TSPAN4-213ENST00000524895 LTBP4Q8N2S1 1624 aa21.93■■□□□ 1.1
TSPAN4-213ENST00000524895 ATP7BP35670 1465 aa21.91■■□□□ 1.1
TSPAN4-213ENST00000524895 MSH6P52701 1360 aa21.91■■□□□ 1.1
TSPAN4-213ENST00000524895 DDX10Q13206 875 aaKnown RBP21.91■■□□□ 1.1
TSPAN4-213ENST00000524895 C19orf44Q9H6X5 657 aa21.91■■□□□ 1.1
TSPAN4-213ENST00000524895 DCCP43146 1447 aa21.9■■□□□ 1.1
TSPAN4-213ENST00000524895 ANKARQ7Z5J8 1434 aa21.89■■□□□ 1.1
TSPAN4-213ENST00000524895 NINLQ9Y2I6 1382 aa21.89■■□□□ 1.1
TSPAN4-213ENST00000524895 USP32Q8NFA0 1604 aa21.89■■□□□ 1.09
TSPAN4-213ENST00000524895 TMC1Q8TDI8 760 aa21.89■■□□□ 1.09
TSPAN4-213ENST00000524895 TOPAZ1Q8N9V7 1692 aa21.88■■□□□ 1.09
TSPAN4-213ENST00000524895 NUTM2FA1L443 756 aa21.88■■□□□ 1.09
TSPAN4-213ENST00000524895 NUDT16Q96DE0 195 aaKnown RBP21.88■■□□□ 1.09
TSPAN4-213ENST00000524895 ITSN1Q15811 1721 aa21.88■■□□□ 1.09
TSPAN4-213ENST00000524895 ATF3P18847 181 aa21.87■■□□□ 1.09
TSPAN4-213ENST00000524895 PRR36Q9H6K5 1346 aa21.86■■□□□ 1.09
TSPAN4-213ENST00000524895 PPIP5K1Q6PFW1 1433 aa21.86■■□□□ 1.09
TSPAN4-213ENST00000524895 CADPS2Q86UW7 1296 aa21.84■■□□□ 1.09
TSPAN4-213ENST00000524895 CCDC61Q9Y6R9 512 aa21.84■■□□□ 1.09
TSPAN4-213ENST00000524895 SLC12A5Q9H2X9 1139 aa21.83■■□□□ 1.09
TSPAN4-213ENST00000524895 CABP1Q9NZU7 370 aa21.82■■□□□ 1.08
TSPAN4-213ENST00000524895 RGPD8O14715 1765 aaPredicted RBP21.82■■□□□ 1.08
TSPAN4-213ENST00000524895 MST1RQ04912 1400 aa21.8■■□□□ 1.08
TSPAN4-213ENST00000524895 ANKRD36BQ8N2N9 1353 aa21.8■■□□□ 1.08
TSPAN4-213ENST00000524895 PANK3Q9H999 370 aa21.8■■□□□ 1.08
TSPAN4-213ENST00000524895 C1orf167Q5SNV9 1468 aa21.79■■□□□ 1.08
TSPAN4-213ENST00000524895 DIEXFQ68CQ4 756 aaKnown RBP21.79■■□□□ 1.08
TSPAN4-213ENST00000524895 TERF2IPQ9NYB0 399 aa21.79■■□□□ 1.08
TSPAN4-213ENST00000524895 HDGFL2Q7Z4V5 671 aaPredicted RBP21.78■■□□□ 1.08
TSPAN4-213ENST00000524895 CD163L1Q9NR16 1453 aa21.77■■□□□ 1.08
TSPAN4-213ENST00000524895 A0A1W2PP64 1363 aa21.77■■□□□ 1.08
TSPAN4-213ENST00000524895 PLEKHG3A1L390 1219 aa21.76■■□□□ 1.07
TSPAN4-213ENST00000524895 ESCO1Q5FWF5 840 aa21.76■■□□□ 1.07
TSPAN4-213ENST00000524895 KIF1AQ12756 1690 aa21.75■■□□□ 1.07
TSPAN4-213ENST00000524895 AKAP12Q02952 1782 aa21.75■■□□□ 1.07
TSPAN4-213ENST00000524895 PMFBP1Q8TBY8 1022 aa21.74■■□□□ 1.07
TSPAN4-213ENST00000524895 PHF8Q9UPP1 1060 aa21.74■■□□□ 1.07
TSPAN4-213ENST00000524895 CPSF1Q10570 1443 aaKnown RBP21.73■■□□□ 1.07
TSPAN4-213ENST00000524895 NSD3Q9BZ95 1437 aa21.73■■□□□ 1.07
TSPAN4-213ENST00000524895 MON2Q7Z3U7 1717 aa21.73■■□□□ 1.07
TSPAN4-213ENST00000524895 NGDNQ8NEJ9 315 aaKnown RBP21.73■■□□□ 1.07
TSPAN4-213ENST00000524895 ACEP12821 1306 aa21.73■■□□□ 1.07
TSPAN4-213ENST00000524895 POLR3AO14802 1390 aaPredicted RBP21.73■■□□□ 1.07
TSPAN4-213ENST00000524895 KTN1Q86UP2 1357 aaKnown RBP21.73■■□□□ 1.07
TSPAN4-213ENST00000524895 IQSEC2Q5JU85 1478 aa21.72■■□□□ 1.07
TSPAN4-213ENST00000524895 KNSTRNQ9Y448 316 aa21.72■■□□□ 1.07
TSPAN4-213ENST00000524895 ORAI2Q96SN7 254 aa21.71■■□□□ 1.07
TSPAN4-213ENST00000524895 ZNF692Q9BU19 519 aaPredicted RBP21.7■■□□□ 1.06
TSPAN4-213ENST00000524895 CARD14Q9BXL6 1004 aa21.7■■□□□ 1.06
TSPAN4-213ENST00000524895 SLAIN2Q9P270 581 aa21.7■■□□□ 1.06
TSPAN4-213ENST00000524895 PER1O15534 1290 aaPredicted RBP21.69■■□□□ 1.06
TSPAN4-213ENST00000524895 EDC4Q6P2E9 1401 aaKnown RBP21.69■■□□□ 1.06
TSPAN4-213ENST00000524895 USP6P35125 1406 aa21.68■■□□□ 1.06
TSPAN4-213ENST00000524895 NRKQ7Z2Y5 1582 aa21.68■■□□□ 1.06
TSPAN4-213ENST00000524895 CGNL1Q0VF96 1302 aa21.65■■□□□ 1.06
TSPAN4-213ENST00000524895 CERKQ8TCT0 537 aa21.65■■□□□ 1.06
TSPAN4-213ENST00000524895 BRINP3Q76B58 766 aa21.64■■□□□ 1.05
TSPAN4-213ENST00000524895 ANP32CO43423 234 aa21.63■■□□□ 1.05
TSPAN4-213ENST00000524895 FOXO3O43524 673 aa21.63■■□□□ 1.05
TSPAN4-213ENST00000524895 PSME1Q06323 249 aa21.63■■□□□ 1.05
TSPAN4-213ENST00000524895 CNGB1Q14028 1251 aaPredicted RBP21.63■■□□□ 1.05
TSPAN4-213ENST00000524895 KIF20BQ96Q89 1820 aa21.63■■□□□ 1.05
TSPAN4-213ENST00000524895 TOM1O60784 492 aa21.62■■□□□ 1.05
TSPAN4-213ENST00000524895 AMER1Q5JTC6 1135 aaPredicted RBP21.62■■□□□ 1.05
TSPAN4-213ENST00000524895 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.62■■□□□ 1.05
TSPAN4-213ENST00000524895 BRD4O60885 1362 aaPredicted RBP21.61■■□□□ 1.05
TSPAN4-213ENST00000524895 NSD2O96028 1365 aa21.61■■□□□ 1.05
TSPAN4-213ENST00000524895 NPC1L1Q9UHC9 1359 aa21.61■■□□□ 1.05
TSPAN4-213ENST00000524895 NPHP3Q7Z494 1330 aa21.61■■□□□ 1.05
TSPAN4-213ENST00000524895 ROBO1Q9Y6N7 1651 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 141.4 ms