RNA–Protein interactions for RNA: ENST00000524523.1

CTR9-202, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene CTR9, Length 902 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-202ENST00000524523 KDM6BO15054 1643 aa10.69□□□□□ -0.7
CTR9-202ENST00000524523 DUOX2Q9NRD8 1548 aa10.68□□□□□ -0.7
CTR9-202ENST00000524523 NUP155O75694 1391 aa10.68□□□□□ -0.7
CTR9-202ENST00000524523 KDM4FA0A1W2PPD8 638 aa10.68□□□□□ -0.7
CTR9-202ENST00000524523 POTEB3A0JP26 581 aa10.68□□□□□ -0.7
CTR9-202ENST00000524523 POTEBQ6S5H4 581 aa10.68□□□□□ -0.7
CTR9-202ENST00000524523 PSDA5PKW4 1024 aaPredicted RBP10.67□□□□□ -0.7
CTR9-202ENST00000524523 ABCC1P33527 1531 aa10.67□□□□□ -0.7
CTR9-202ENST00000524523 SYCP2Q9BX26 1530 aa10.67□□□□□ -0.7
CTR9-202ENST00000524523 EVI5O60447 810 aa10.66□□□□□ -0.7
CTR9-202ENST00000524523 STAC3Q96MF2 364 aa10.66□□□□□ -0.7
CTR9-202ENST00000524523 FANCAO15360 1455 aa10.66□□□□□ -0.7
CTR9-202ENST00000524523 SPAG9O60271 1321 aaKnown RBP10.65□□□□□ -0.7
CTR9-202ENST00000524523 ARHGEF12Q9NZN5 1544 aa10.65□□□□□ -0.7
CTR9-202ENST00000524523 ATP10AO60312 1499 aa10.65□□□□□ -0.7
CTR9-202ENST00000524523 DPYSL4O14531 572 aa10.64□□□□□ -0.71
CTR9-202ENST00000524523 ZNF687Q8N1G0 1237 aa10.64□□□□□ -0.71
CTR9-202ENST00000524523 L3MBTL2Q969R5 705 aa10.63□□□□□ -0.71
CTR9-202ENST00000524523 ANO8Q9HCE9 1232 aaPredicted RBP10.63□□□□□ -0.71
CTR9-202ENST00000524523 MAGI2Q86UL8 1455 aa10.62□□□□□ -0.71
CTR9-202ENST00000524523 CD109Q6YHK3 1445 aa10.62□□□□□ -0.71
CTR9-202ENST00000524523 TRAPPC8Q9Y2L5 1435 aa10.62□□□□□ -0.71
CTR9-202ENST00000524523 NEO1Q92859 1461 aa10.61□□□□□ -0.71
CTR9-202ENST00000524523 UNC13BO14795 1591 aa10.61□□□□□ -0.71
CTR9-202ENST00000524523 CFAP74Q9C0B2 1584 aa10.61□□□□□ -0.71
CTR9-202ENST00000524523 DHX29Q7Z478 1369 aaKnown RBP10.61□□□□□ -0.71
CTR9-202ENST00000524523 UHRF1BP1Q6BDS2 1440 aa10.6□□□□□ -0.71
CTR9-202ENST00000524523 SCAPERQ9BY12 1400 aa10.6□□□□□ -0.71
CTR9-202ENST00000524523 EIF4G2P78344 907 aaKnown RBP eCLIP10.6□□□□□ -0.71
CTR9-202ENST00000524523 PPP4R3BQ5MIZ7 849 aa10.6□□□□□ -0.71
CTR9-202ENST00000524523 ADGRL1O94910 1474 aa10.6□□□□□ -0.71
CTR9-202ENST00000524523 ZNF518AQ6AHZ1 1483 aa10.6□□□□□ -0.71
CTR9-202ENST00000524523 TEX14Q8IWB6 1497 aa10.6□□□□□ -0.71
CTR9-202ENST00000524523 FAM135AQ9P2D6 1515 aa10.59□□□□□ -0.71
CTR9-202ENST00000524523 AFAP1Q8N556 730 aa10.59□□□□□ -0.71
CTR9-202ENST00000524523 ARIH1Q9Y4X5 557 aaPredicted RBP10.59□□□□□ -0.71
CTR9-202ENST00000524523 GLI2P10070 1586 aa10.58□□□□□ -0.72
CTR9-202ENST00000524523 MLH3Q9UHC1 1453 aa10.58□□□□□ -0.72
CTR9-202ENST00000524523 ARID4BQ4LE39 1312 aaPredicted RBP10.58□□□□□ -0.72
CTR9-202ENST00000524523 KANK1Q14678 1352 aa10.57□□□□□ -0.72
CTR9-202ENST00000524523 SPDYE16A6NNV3 312 aaPredicted RBP10.57□□□□□ -0.72
CTR9-202ENST00000524523 VSIG10Q8N0Z9 540 aa10.57□□□□□ -0.72
CTR9-202ENST00000524523 ZNF454Q8N9F8 522 aa10.57□□□□□ -0.72
CTR9-202ENST00000524523 BCANQ96GW7 911 aa10.57□□□□□ -0.72
CTR9-202ENST00000524523 IQGAP3Q86VI3 1631 aa10.57□□□□□ -0.72
CTR9-202ENST00000524523 ZFYVE16Q7Z3T8 1539 aa10.57□□□□□ -0.72
CTR9-202ENST00000524523 ATP7AQ04656 1500 aa10.55□□□□□ -0.72
CTR9-202ENST00000524523 PBX2P40425 430 aa10.55□□□□□ -0.72
CTR9-202ENST00000524523 FOSBP53539 338 aa10.55□□□□□ -0.72
CTR9-202ENST00000524523 PDIA6Q15084 440 aa10.55□□□□□ -0.72
CTR9-202ENST00000524523 CCDC144AA2RUR9 1427 aa10.55□□□□□ -0.72
CTR9-202ENST00000524523 INO80Q9ULG1 1556 aaPredicted RBP10.55□□□□□ -0.72
CTR9-202ENST00000524523 EIF2AK4Q9P2K8 1649 aaKnown RBP10.55□□□□□ -0.72
CTR9-202ENST00000524523 CENPBP07199 599 aaPredicted RBP10.54□□□□□ -0.72
CTR9-202ENST00000524523 SPATA31E1Q6ZUB1 1445 aa10.54□□□□□ -0.72
CTR9-202ENST00000524523 POGZQ7Z3K3 1410 aa10.54□□□□□ -0.72
CTR9-202ENST00000524523 ARHGEF1Q92888 912 aaKnown RBP10.54□□□□□ -0.72
CTR9-202ENST00000524523 KRTAP3-3Q9BYR6 98 aa10.54□□□□□ -0.72
CTR9-202ENST00000524523 KRTAP3-2Q9BYR7 98 aa10.54□□□□□ -0.72
CTR9-202ENST00000524523 KDM5CP41229 1560 aa10.53□□□□□ -0.72
CTR9-202ENST00000524523 PTPRTO14522 1441 aa10.53□□□□□ -0.72
CTR9-202ENST00000524523 CYB5RLQ6IPT4 315 aa10.53□□□□□ -0.72
CTR9-202ENST00000524523 KCNV2Q8TDN2 545 aa10.53□□□□□ -0.72
CTR9-202ENST00000524523 VWDEQ8N2E2 1590 aa10.52□□□□□ -0.72
CTR9-202ENST00000524523 NEURL4Q96JN8 1562 aa10.52□□□□□ -0.73
CTR9-202ENST00000524523 DEPDC5O75140 1603 aa10.51□□□□□ -0.73
CTR9-202ENST00000524523 PLA2R1Q13018 1463 aa10.51□□□□□ -0.73
CTR9-202ENST00000524523 PHF14O94880 888 aa10.51□□□□□ -0.73
CTR9-202ENST00000524523 HSPA5P11021 654 aaKnown RBP10.51□□□□□ -0.73
CTR9-202ENST00000524523 PTGER2P43116 358 aa10.51□□□□□ -0.73
CTR9-202ENST00000524523 NBPF8Q3BBV2 869 aa10.51□□□□□ -0.73
CTR9-202ENST00000524523 ZDHHC16Q969W1 377 aa10.51□□□□□ -0.73
CTR9-202ENST00000524523 LMTK2Q8IWU2 1503 aa10.51□□□□□ -0.73
CTR9-202ENST00000524523 CCER2I3L3R5 266 aa10.5□□□□□ -0.73
CTR9-202ENST00000524523 ARHGAP33O14559 1287 aa10.5□□□□□ -0.73
CTR9-202ENST00000524523 KDM2AQ9Y2K7 1162 aa10.5□□□□□ -0.73
CTR9-202ENST00000524523 A2MP01023 1474 aa10.49□□□□□ -0.73
CTR9-202ENST00000524523 RIMBP3CA6NJZ7 1639 aa10.49□□□□□ -0.73
CTR9-202ENST00000524523 RIMBP3BA6NNM3 1639 aa10.49□□□□□ -0.73
CTR9-202ENST00000524523 RIMBP3Q9UFD9 1639 aa10.49□□□□□ -0.73
CTR9-202ENST00000524523 KIF3BO15066 747 aa10.49□□□□□ -0.73
CTR9-202ENST00000524523 TYW1BQ6NUM6 668 aa10.49□□□□□ -0.73
CTR9-202ENST00000524523 DDX12PQ92771 950 aa10.49□□□□□ -0.73
CTR9-202ENST00000524523 FBXW7Q969H0 707 aa10.49□□□□□ -0.73
CTR9-202ENST00000524523 EPAS1Q99814 870 aa10.49□□□□□ -0.73
CTR9-202ENST00000524523 AXIN2Q9Y2T1 843 aa10.49□□□□□ -0.73
CTR9-202ENST00000524523 PCDHGA10Q9Y5H3 936 aa10.49□□□□□ -0.73
CTR9-202ENST00000524523 RALGAPBQ86X10 1494 aa10.49□□□□□ -0.73
CTR9-202ENST00000524523 PRDM15P57071 1507 aaPredicted RBP10.48□□□□□ -0.73
CTR9-202ENST00000524523 DDX10Q13206 875 aaKnown RBP10.48□□□□□ -0.73
CTR9-202ENST00000524523 BCL2L12Q9HB09 334 aa10.48□□□□□ -0.73
CTR9-202ENST00000524523 GPRASP1Q5JY77 1395 aa10.48□□□□□ -0.73
CTR9-202ENST00000524523 MAP3K4Q9Y6R4 1608 aa10.47□□□□□ -0.73
CTR9-202ENST00000524523 BCORL1Q5H9F3 1711 aa10.47□□□□□ -0.73
CTR9-202ENST00000524523 LSM11P83369 360 aaKnown RBP eCLIP10.47□□□□□ -0.73
CTR9-202ENST00000524523 POTEEQ6S8J3 1075 aa10.47□□□□□ -0.73
CTR9-202ENST00000524523 KIDINS220Q9ULH0 1771 aa10.47□□□□□ -0.73
CTR9-202ENST00000524523 ANP32CO43423 234 aa10.46□□□□□ -0.73
CTR9-202ENST00000524523 PTPREP23469 700 aa10.46□□□□□ -0.73
CTR9-202ENST00000524523 ANKRD13DQ6ZTN6 518 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms