RNA–Protein interactions for RNA: ENST00000524379.1

LMO1-203, Transcript of LIM domain only 1, humanhuman

TSL 1 (best)

Gene LMO1, Length 785 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1-203ENST00000524379 CARD11Q9BXL7 1154 aa26.57■■□□□ 1.84
LMO1-203ENST00000524379 PRAM1Q96QH2 718 aa26.55■■□□□ 1.84
LMO1-203ENST00000524379 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.54■■□□□ 1.84
LMO1-203ENST00000524379 NALCNQ8IZF0 1738 aa26.52■■□□□ 1.84
LMO1-203ENST00000524379 SAFB2Q14151 953 aaKnown RBP eCLIP26.49■■□□□ 1.83
LMO1-203ENST00000524379 ADGRL3Q9HAR2 1447 aa26.48■■□□□ 1.83
LMO1-203ENST00000524379 NCOA3Q9Y6Q9 1424 aa26.48■■□□□ 1.83
LMO1-203ENST00000524379 USP47Q96K76 1375 aa26.47■■□□□ 1.83
LMO1-203ENST00000524379 POGKQ9P215 609 aa26.45■■□□□ 1.82
LMO1-203ENST00000524379 MED1Q15648 1581 aaPredicted RBP26.45■■□□□ 1.82
LMO1-203ENST00000524379 QRICH2Q9H0J4 1663 aa26.44■■□□□ 1.82
LMO1-203ENST00000524379 CENPJQ9HC77 1338 aaPredicted RBP26.44■■□□□ 1.82
LMO1-203ENST00000524379 ZEB1P37275 1124 aaPredicted RBP26.43■■□□□ 1.82
LMO1-203ENST00000524379 ADGRB2O60241 1585 aa26.42■■□□□ 1.82
LMO1-203ENST00000524379 EIF3AQ14152 1382 aaKnown RBP26.42■■□□□ 1.82
LMO1-203ENST00000524379 MINK1Q8N4C8 1332 aaPredicted RBP26.41■■□□□ 1.82
LMO1-203ENST00000524379 ST20-MTHFSA0A0A6YYL1 179 aa26.4■■□□□ 1.82
LMO1-203ENST00000524379 PHF23Q9BUL5 403 aaPredicted RBP26.4■■□□□ 1.82
LMO1-203ENST00000524379 HIRIP3Q9BW71 556 aaPredicted RBP26.4■■□□□ 1.82
LMO1-203ENST00000524379 CDC42BPGQ6DT37 1551 aa26.4■■□□□ 1.82
LMO1-203ENST00000524379 C14orf37Q86TY3 774 aa26.39■■□□□ 1.82
LMO1-203ENST00000524379 C19orf44Q9H6X5 657 aa26.39■■□□□ 1.82
LMO1-203ENST00000524379 MSH6P52701 1360 aa26.38■■□□□ 1.81
LMO1-203ENST00000524379 TESK2Q96S53 571 aa26.38■■□□□ 1.81
LMO1-203ENST00000524379 TULP4Q9NRJ4 1543 aa26.38■■□□□ 1.81
LMO1-203ENST00000524379 HSPA5P11021 654 aaKnown RBP26.36■■□□□ 1.81
LMO1-203ENST00000524379 DCCP43146 1447 aa26.36■■□□□ 1.81
LMO1-203ENST00000524379 SBNO2Q9Y2G9 1366 aa26.35■■□□□ 1.81
LMO1-203ENST00000524379 FMN2Q9NZ56 1722 aa26.34■■□□□ 1.81
LMO1-203ENST00000524379 MST1RQ04912 1400 aa26.32■■□□□ 1.8
LMO1-203ENST00000524379 EIF4G2P78344 907 aaKnown RBP eCLIP26.32■■□□□ 1.8
LMO1-203ENST00000524379 USP32Q8NFA0 1604 aa26.31■■□□□ 1.8
LMO1-203ENST00000524379 WASLO00401 505 aaPredicted RBP26.3■■□□□ 1.8
LMO1-203ENST00000524379 ATF3P18847 181 aa26.28■■□□□ 1.8
LMO1-203ENST00000524379 CADPS2Q86UW7 1296 aa26.28■■□□□ 1.8
LMO1-203ENST00000524379 PRR36Q9H6K5 1346 aa26.28■■□□□ 1.8
LMO1-203ENST00000524379 CDK19Q9BWU1 502 aa26.27■■□□□ 1.8
LMO1-203ENST00000524379 SLAIN2Q9P270 581 aa26.27■■□□□ 1.8
LMO1-203ENST00000524379 C1orf167Q5SNV9 1468 aa26.26■■□□□ 1.79
LMO1-203ENST00000524379 NUTM2FA1L443 756 aa26.26■■□□□ 1.79
LMO1-203ENST00000524379 ATP7BP35670 1465 aa26.24■■□□□ 1.79
LMO1-203ENST00000524379 CABP2Q9NPB3 220 aa26.23■■□□□ 1.79
LMO1-203ENST00000524379 RGPD8O14715 1765 aaPredicted RBP26.22■■□□□ 1.79
LMO1-203ENST00000524379 ANKARQ7Z5J8 1434 aa26.22■■□□□ 1.79
LMO1-203ENST00000524379 EVC2Q86UK5 1308 aa26.21■■□□□ 1.79
LMO1-203ENST00000524379 ROBO1Q9Y6N7 1651 aa26.2■■□□□ 1.78
LMO1-203ENST00000524379 C11orf95C9JLR9 678 aaPredicted RBP26.2■■□□□ 1.78
LMO1-203ENST00000524379 TOPAZ1Q8N9V7 1692 aa26.19■■□□□ 1.78
LMO1-203ENST00000524379 NUDT16Q96DE0 195 aaKnown RBP26.18■■□□□ 1.78
LMO1-203ENST00000524379 ORAI2Q96SN7 254 aa26.18■■□□□ 1.78
LMO1-203ENST00000524379 SRPK2P78362 688 aaKnown RBP26.17■■□□□ 1.78
LMO1-203ENST00000524379 RGS17Q9UGC6 210 aaPredicted RBP26.17■■□□□ 1.78
LMO1-203ENST00000524379 BRINP3Q76B58 766 aa26.16■■□□□ 1.78
LMO1-203ENST00000524379 TMF1P82094 1093 aa26.15■■□□□ 1.78
LMO1-203ENST00000524379 ESCO1Q5FWF5 840 aa26.11■■□□□ 1.77
LMO1-203ENST00000524379 PUS7Q96PZ0 661 aaKnown RBP26.1■■□□□ 1.77
LMO1-203ENST00000524379 ITSN1Q15811 1721 aa26.1■■□□□ 1.77
LMO1-203ENST00000524379 ATAD2Q6PL18 1390 aa26.09■■□□□ 1.77
LMO1-203ENST00000524379 PPIP5K1Q6PFW1 1433 aa26.09■■□□□ 1.77
LMO1-203ENST00000524379 CCDC61Q9Y6R9 512 aa26.09■■□□□ 1.77
LMO1-203ENST00000524379 SLC24A1O60721 1099 aa26.08■■□□□ 1.77
LMO1-203ENST00000524379 DDX17Q92841 729 aaKnown RBP26.08■■□□□ 1.77
LMO1-203ENST00000524379 PHF8Q9UPP1 1060 aa26.08■■□□□ 1.77
LMO1-203ENST00000524379 MYOM1P52179 1685 aa26.07■■□□□ 1.76
LMO1-203ENST00000524379 KIF1AQ12756 1690 aa26.07■■□□□ 1.76
LMO1-203ENST00000524379 PMFBP1Q8TBY8 1022 aa26.07■■□□□ 1.76
LMO1-203ENST00000524379 KIF7Q2M1P5 1343 aa26.07■■□□□ 1.76
LMO1-203ENST00000524379 JCADQ9P266 1359 aa26.07■■□□□ 1.76
LMO1-203ENST00000524379 NHSL1Q5SYE7 1610 aa26.06■■□□□ 1.76
LMO1-203ENST00000524379 PLEKHG3A1L390 1219 aa26.06■■□□□ 1.76
LMO1-203ENST00000524379 CABP1Q9NZU7 370 aa26.06■■□□□ 1.76
LMO1-203ENST00000524379 PHLPP1O60346 1717 aa26.05■■□□□ 1.76
LMO1-203ENST00000524379 CD163L1Q9NR16 1453 aa26.05■■□□□ 1.76
LMO1-203ENST00000524379 AHDC1Q5TGY3 1603 aaPredicted RBP26.04■■□□□ 1.76
LMO1-203ENST00000524379 SLC12A5Q9H2X9 1139 aa26.04■■□□□ 1.76
LMO1-203ENST00000524379 WASHC2AQ641Q2 1341 aa26.04■■□□□ 1.76
LMO1-203ENST00000524379 POLR3AO14802 1390 aaPredicted RBP26.04■■□□□ 1.76
LMO1-203ENST00000524379 POTEAQ6S8J7 498 aa26.03■■□□□ 1.76
LMO1-203ENST00000524379 CCDC7Q96M83 1385 aa26.03■■□□□ 1.76
LMO1-203ENST00000524379 PXDNQ92626 1479 aa26.02■■□□□ 1.76
LMO1-203ENST00000524379 FOXO3O43524 673 aa26.01■■□□□ 1.75
LMO1-203ENST00000524379 ACEP12821 1306 aa26.01■■□□□ 1.75
LMO1-203ENST00000524379 CDCA8Q53HL2 280 aa26.01■■□□□ 1.75
LMO1-203ENST00000524379 CPSF1Q10570 1443 aaKnown RBP25.99■■□□□ 1.75
LMO1-203ENST00000524379 POLR3GLQ9BT43 218 aa25.99■■□□□ 1.75
LMO1-203ENST00000524379 XPCQ01831 940 aaPredicted RBP25.98■■□□□ 1.75
LMO1-203ENST00000524379 TMC1Q8TDI8 760 aa25.98■■□□□ 1.75
LMO1-203ENST00000524379 COL16A1Q07092 1604 aaPredicted RBP25.98■■□□□ 1.75
LMO1-203ENST00000524379 AKAP12Q02952 1782 aa25.97■■□□□ 1.75
LMO1-203ENST00000524379 SOS2Q07890 1332 aaPredicted RBP25.96■■□□□ 1.75
LMO1-203ENST00000524379 NGDNQ8NEJ9 315 aaKnown RBP25.96■■□□□ 1.75
LMO1-203ENST00000524379 TRPM3Q9HCF6 1732 aaPredicted RBP25.96■■□□□ 1.75
LMO1-203ENST00000524379 A0A1W2PP64 1363 aa25.95■■□□□ 1.75
LMO1-203ENST00000524379 NINLQ9Y2I6 1382 aa25.95■■□□□ 1.75
LMO1-203ENST00000524379 NPHP3Q7Z494 1330 aa25.95■■□□□ 1.75
LMO1-203ENST00000524379 SPATA31A6Q5VVP1 1343 aa25.94■■□□□ 1.74
LMO1-203ENST00000524379 SSH2Q76I76 1423 aa25.94■■□□□ 1.74
LMO1-203ENST00000524379 MON2Q7Z3U7 1717 aa25.94■■□□□ 1.74
LMO1-203ENST00000524379 USP6P35125 1406 aa25.93■■□□□ 1.74
LMO1-203ENST00000524379 NRKQ7Z2Y5 1582 aa25.93■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms