RNA–Protein interactions for RNA: ENST00000524258.2

CLN8-207, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 2

Gene CLN8, Length 835 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-207ENST00000524258 TRAK1Q9UPV9 953 aa17.26■□□□□ 0.35
CLN8-207ENST00000524258 CLSPNQ9HAW4 1339 aa17.25■□□□□ 0.35
CLN8-207ENST00000524258 BRINP3Q76B58 766 aa17.25■□□□□ 0.35
CLN8-207ENST00000524258 ROBO1Q9Y6N7 1651 aa17.25■□□□□ 0.35
CLN8-207ENST00000524258 C1orf167Q5SNV9 1468 aa17.24■□□□□ 0.35
CLN8-207ENST00000524258 CDC42BPGQ6DT37 1551 aa17.23■□□□□ 0.35
CLN8-207ENST00000524258 GPRASP1Q5JY77 1395 aa17.2■□□□□ 0.34
CLN8-207ENST00000524258 TONSLQ96HA7 1378 aa17.2■□□□□ 0.34
CLN8-207ENST00000524258 SAFB2Q14151 953 aaKnown RBP eCLIP17.2■□□□□ 0.34
CLN8-207ENST00000524258 ORAI2Q96SN7 254 aa17.2■□□□□ 0.34
CLN8-207ENST00000524258 TRPM1Q7Z4N2 1603 aa17.2■□□□□ 0.34
CLN8-207ENST00000524258 POGKQ9P215 609 aa17.18■□□□□ 0.34
CLN8-207ENST00000524258 ARHGEF28Q8N1W1 1705 aaKnown RBP17.18■□□□□ 0.34
CLN8-207ENST00000524258 AHDC1Q5TGY3 1603 aaPredicted RBP17.18■□□□□ 0.34
CLN8-207ENST00000524258 ADGRB2O60241 1585 aa17.17■□□□□ 0.34
CLN8-207ENST00000524258 COL16A1Q07092 1604 aaPredicted RBP17.15■□□□□ 0.34
CLN8-207ENST00000524258 DDX17Q92841 729 aaKnown RBP17.15■□□□□ 0.34
CLN8-207ENST00000524258 TIMELESSQ9UNS1 1208 aa17.15■□□□□ 0.34
CLN8-207ENST00000524258 FMN2Q9NZ56 1722 aa17.15■□□□□ 0.34
CLN8-207ENST00000524258 MINK1Q8N4C8 1332 aaPredicted RBP17.15■□□□□ 0.34
CLN8-207ENST00000524258 RALGAPBQ86X10 1494 aa17.14■□□□□ 0.33
CLN8-207ENST00000524258 HIRIP3Q9BW71 556 aaPredicted RBP17.14■□□□□ 0.33
CLN8-207ENST00000524258 ROCK2O75116 1388 aaKnown RBP17.14■□□□□ 0.33
CLN8-207ENST00000524258 NUTM2FA1L443 756 aa17.13■□□□□ 0.33
CLN8-207ENST00000524258 WASLO00401 505 aaPredicted RBP17.13■□□□□ 0.33
CLN8-207ENST00000524258 PRR36Q9H6K5 1346 aa17.13■□□□□ 0.33
CLN8-207ENST00000524258 NHSL1Q5SYE7 1610 aa17.12■□□□□ 0.33
CLN8-207ENST00000524258 SOS2Q07890 1332 aaPredicted RBP17.12■□□□□ 0.33
CLN8-207ENST00000524258 CCER1Q8TC90 406 aaPredicted RBP17.11■□□□□ 0.33
CLN8-207ENST00000524258 CENPJQ9HC77 1338 aaPredicted RBP17.11■□□□□ 0.33
CLN8-207ENST00000524258 USP32Q8NFA0 1604 aa17.1■□□□□ 0.33
CLN8-207ENST00000524258 PHLPP1O60346 1717 aa17.1■□□□□ 0.33
CLN8-207ENST00000524258 ESCO1Q5FWF5 840 aa17.1■□□□□ 0.33
CLN8-207ENST00000524258 ANKARQ7Z5J8 1434 aa17.1■□□□□ 0.33
CLN8-207ENST00000524258 TULP4Q9NRJ4 1543 aa17.07■□□□□ 0.32
CLN8-207ENST00000524258 PXDNQ92626 1479 aa17.07■□□□□ 0.32
CLN8-207ENST00000524258 JCADQ9P266 1359 aa17.07■□□□□ 0.32
CLN8-207ENST00000524258 FOXO3O43524 673 aa17.07■□□□□ 0.32
CLN8-207ENST00000524258 CDK19Q9BWU1 502 aa17.07■□□□□ 0.32
CLN8-207ENST00000524258 CARD11Q9BXL7 1154 aa17.07■□□□□ 0.32
CLN8-207ENST00000524258 PHF8Q9UPP1 1060 aa17.06■□□□□ 0.32
CLN8-207ENST00000524258 ATP7BP35670 1465 aa17.05■□□□□ 0.32
CLN8-207ENST00000524258 RGPD8O14715 1765 aaPredicted RBP17.05■□□□□ 0.32
CLN8-207ENST00000524258 NPHP3Q7Z494 1330 aa17.04■□□□□ 0.32
CLN8-207ENST00000524258 LRRC59Q96AG4 307 aaKnown RBP17.04■□□□□ 0.32
CLN8-207ENST00000524258 NUDT16Q96DE0 195 aaKnown RBP17.04■□□□□ 0.32
CLN8-207ENST00000524258 PNPLA6Q8IY17 1366 aa17.03■□□□□ 0.32
CLN8-207ENST00000524258 SBNO2Q9Y2G9 1366 aa17.03■□□□□ 0.32
CLN8-207ENST00000524258 MED1Q15648 1581 aaPredicted RBP17.03■□□□□ 0.32
CLN8-207ENST00000524258 EIF3AQ14152 1382 aaKnown RBP17.02■□□□□ 0.32
CLN8-207ENST00000524258 QRICH2Q9H0J4 1663 aa17.01■□□□□ 0.31
CLN8-207ENST00000524258 XPCQ01831 940 aaPredicted RBP17.01■□□□□ 0.31
CLN8-207ENST00000524258 PMFBP1Q8TBY8 1022 aa17.01■□□□□ 0.31
CLN8-207ENST00000524258 TESK2Q96S53 571 aa17.01■□□□□ 0.31
CLN8-207ENST00000524258 KIF1AQ12756 1690 aa17.01■□□□□ 0.31
CLN8-207ENST00000524258 SHPRHQ149N8 1683 aa17.01■□□□□ 0.31
CLN8-207ENST00000524258 LRP6O75581 1613 aa17■□□□□ 0.31
CLN8-207ENST00000524258 PLEKHG3A1L390 1219 aa17■□□□□ 0.31
CLN8-207ENST00000524258 KRT28Q7Z3Y7 464 aa17■□□□□ 0.31
CLN8-207ENST00000524258 CABP2Q9NPB3 220 aa17■□□□□ 0.31
CLN8-207ENST00000524258 SPATA31A6Q5VVP1 1343 aa16.99■□□□□ 0.31
CLN8-207ENST00000524258 CCDC61Q9Y6R9 512 aa16.99■□□□□ 0.31
CLN8-207ENST00000524258 SPATA31A3Q5VYP0 1347 aa16.98■□□□□ 0.31
CLN8-207ENST00000524258 RGS17Q9UGC6 210 aaPredicted RBP16.98■□□□□ 0.31
CLN8-207ENST00000524258 POLR3AO14802 1390 aaPredicted RBP16.98■□□□□ 0.31
CLN8-207ENST00000524258 ST20-MTHFSA0A0A6YYL1 179 aa16.97■□□□□ 0.31
CLN8-207ENST00000524258 SBNO1A3KN83 1393 aa16.97■□□□□ 0.31
CLN8-207ENST00000524258 TOPAZ1Q8N9V7 1692 aa16.97■□□□□ 0.31
CLN8-207ENST00000524258 EVC2Q86UK5 1308 aa16.96■□□□□ 0.31
CLN8-207ENST00000524258 DISP3Q9P2K9 1392 aa16.95■□□□□ 0.3
CLN8-207ENST00000524258 SRPK2P78362 688 aaKnown RBP16.95■□□□□ 0.3
CLN8-207ENST00000524258 USP47Q96K76 1375 aa16.94■□□□□ 0.3
CLN8-207ENST00000524258 COL22A1Q8NFW1 1626 aaPredicted RBP16.94■□□□□ 0.3
CLN8-207ENST00000524258 ACEP12821 1306 aa16.94■□□□□ 0.3
CLN8-207ENST00000524258 PSME1Q06323 249 aa16.93■□□□□ 0.3
CLN8-207ENST00000524258 CABP1Q9NZU7 370 aa16.93■□□□□ 0.3
CLN8-207ENST00000524258 TNS3Q68CZ2 1445 aa16.93■□□□□ 0.3
CLN8-207ENST00000524258 TRPM3Q9HCF6 1732 aaPredicted RBP16.93■□□□□ 0.3
CLN8-207ENST00000524258 NGDNQ8NEJ9 315 aaKnown RBP16.92■□□□□ 0.3
CLN8-207ENST00000524258 PUS7Q96PZ0 661 aaKnown RBP16.92■□□□□ 0.3
CLN8-207ENST00000524258 PPIP5K1Q6PFW1 1433 aa16.92■□□□□ 0.3
CLN8-207ENST00000524258 ITSN1Q15811 1721 aa16.9■□□□□ 0.3
CLN8-207ENST00000524258 NUTM2BA6NNL0 878 aaPredicted RBP16.9■□□□□ 0.3
CLN8-207ENST00000524258 NUTM2EB1AL46 878 aaPredicted RBP16.9■□□□□ 0.3
CLN8-207ENST00000524258 NUTM2AQ8IVF1 878 aaPredicted RBP16.9■□□□□ 0.3
CLN8-207ENST00000524258 SSH2Q76I76 1423 aa16.89■□□□□ 0.29
CLN8-207ENST00000524258 ILDR2Q71H61 639 aa16.89■□□□□ 0.29
CLN8-207ENST00000524258 ATAD2Q6PL18 1390 aa16.88■□□□□ 0.29
CLN8-207ENST00000524258 ALS2Q96Q42 1657 aa16.88■□□□□ 0.29
CLN8-207ENST00000524258 CPSF1Q10570 1443 aaKnown RBP16.87■□□□□ 0.29
CLN8-207ENST00000524258 ARHGEF10O15013 1369 aa16.87■□□□□ 0.29
CLN8-207ENST00000524258 CD163L1Q9NR16 1453 aa16.86■□□□□ 0.29
CLN8-207ENST00000524258 POTEAQ6S8J7 498 aa16.86■□□□□ 0.29
CLN8-207ENST00000524258 CABLES1Q8TDN4 633 aa16.85■□□□□ 0.29
CLN8-207ENST00000524258 USP6P35125 1406 aa16.85■□□□□ 0.29
CLN8-207ENST00000524258 SLC24A1O60721 1099 aa16.84■□□□□ 0.29
CLN8-207ENST00000524258 SLC12A5Q9H2X9 1139 aa16.84■□□□□ 0.29
CLN8-207ENST00000524258 BRD4O60885 1362 aaPredicted RBP16.84■□□□□ 0.29
CLN8-207ENST00000524258 ADAMTS2O95450 1211 aa16.83■□□□□ 0.28
CLN8-207ENST00000524258 FNBP4Q8N3X1 1017 aaPredicted RBP16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms