RNA–Protein interactions for RNA: ENST00000524204.1

NPM1-212, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-212ENST00000524204 RNF19BQ6ZMZ0 732 aa11.69□□□□□ -0.54
NPM1-212ENST00000524204 TRIM32Q13049 653 aa11.68□□□□□ -0.54
NPM1-212ENST00000524204 NLRP7Q8WX94 980 aa11.68□□□□□ -0.54
NPM1-212ENST00000524204 SALL2Q9Y467 1007 aaPredicted RBP11.68□□□□□ -0.54
NPM1-212ENST00000524204 DAXXQ9UER7 740 aaPredicted RBP11.67□□□□□ -0.54
NPM1-212ENST00000524204 DDX11L8A8MPP1 907 aa11.66□□□□□ -0.54
NPM1-212ENST00000524204 FECHP22830 423 aa11.66□□□□□ -0.54
NPM1-212ENST00000524204 GCGRP47871 477 aa11.65□□□□□ -0.54
NPM1-212ENST00000524204 MSS51Q4VC12 460 aa11.65□□□□□ -0.54
NPM1-212ENST00000524204 GMPRP36959 345 aa11.64□□□□□ -0.55
NPM1-212ENST00000524204 KIFC2Q96AC6 838 aa11.63□□□□□ -0.55
NPM1-212ENST00000524204 HIC1Q14526 733 aa11.59□□□□□ -0.55
NPM1-212ENST00000524204 ZSCAN1Q8NBB4 408 aa11.59□□□□□ -0.55
NPM1-212ENST00000524204 NXF1Q9UBU9 619 aaKnown RBP11.59□□□□□ -0.55
NPM1-212ENST00000524204 FAM181BA6NEQ2 426 aa11.58□□□□□ -0.56
NPM1-212ENST00000524204 SEMA3EO15041 775 aa11.58□□□□□ -0.56
NPM1-212ENST00000524204 MMP16P51512 607 aa11.58□□□□□ -0.56
NPM1-212ENST00000524204 SLC16A10Q8TF71 515 aa11.58□□□□□ -0.56
NPM1-212ENST00000524204 VEGFBP49765 207 aa11.57□□□□□ -0.56
NPM1-212ENST00000524204 SKOR1P84550 965 aa11.57□□□□□ -0.56
NPM1-212ENST00000524204 PHOX2BQ99453 314 aa11.57□□□□□ -0.56
NPM1-212ENST00000524204 RC3H1Q5TC82 1133 aaKnown RBP11.56□□□□□ -0.56
NPM1-212ENST00000524204 TRIM46Q7Z4K8 759 aa11.53□□□□□ -0.56
NPM1-212ENST00000524204 REPIN1Q9BWE0 567 aaKnown RBP11.53□□□□□ -0.56
NPM1-212ENST00000524204 TSHZ2Q9NRE2 1034 aa11.53□□□□□ -0.56
NPM1-212ENST00000524204 BMP1P13497 986 aa11.52□□□□□ -0.57
NPM1-212ENST00000524204 RBM26Q5T8P6 1007 aaKnown RBP11.52□□□□□ -0.57
NPM1-212ENST00000524204 ERBB4Q15303 1308 aa11.52□□□□□ -0.57
NPM1-212ENST00000524204 DXOO77932 396 aaKnown RBP11.51□□□□□ -0.57
NPM1-212ENST00000524204 GNPATO15228 680 aa11.5□□□□□ -0.57
NPM1-212ENST00000524204 GPR37O15354 613 aa11.5□□□□□ -0.57
NPM1-212ENST00000524204 ALDH1A1P00352 501 aa11.5□□□□□ -0.57
NPM1-212ENST00000524204 IRF7Q92985 503 aa11.5□□□□□ -0.57
NPM1-212ENST00000524204 SUZ12Q15022 739 aaKnown RBP11.49□□□□□ -0.57
NPM1-212ENST00000524204 SULF1Q8IWU6 871 aa11.49□□□□□ -0.57
NPM1-212ENST00000524204 CCDC24Q8N4L8 307 aa11.49□□□□□ -0.57
NPM1-212ENST00000524204 H3BM21 787 aa11.48□□□□□ -0.57
NPM1-212ENST00000524204 NPAS3Q8IXF0 933 aa11.48□□□□□ -0.57
NPM1-212ENST00000524204 Q3C1V9 767 aa11.47□□□□□ -0.57
NPM1-212ENST00000524204 USB1Q9BQ65 265 aaKnown RBP11.47□□□□□ -0.57
NPM1-212ENST00000524204 SIAH2O43255 324 aa11.46□□□□□ -0.57
NPM1-212ENST00000524204 WNT7BP56706 349 aa11.46□□□□□ -0.57
NPM1-212ENST00000524204 GRIPAP1Q4V328 841 aa11.46□□□□□ -0.57
NPM1-212ENST00000524204 HLA-CQ95604 372 aa11.44□□□□□ -0.58
NPM1-212ENST00000524204 CAPN5O15484 640 aaPredicted RBP11.43□□□□□ -0.58
NPM1-212ENST00000524204 CD46P15529 392 aa11.39□□□□□ -0.59
NPM1-212ENST00000524204 PTCRAQ6ISU1 281 aaPredicted RBP11.39□□□□□ -0.59
NPM1-212ENST00000524204 ZFP42Q96MM3 310 aa11.38□□□□□ -0.59
NPM1-212ENST00000524204 TESPA1A2RU30 521 aaPredicted RBP11.37□□□□□ -0.59
NPM1-212ENST00000524204 KDM4AO75164 1064 aa11.36□□□□□ -0.59
NPM1-212ENST00000524204 GSK3AP49840 483 aa11.36□□□□□ -0.59
NPM1-212ENST00000524204 WASF2Q9Y6W5 498 aa11.35□□□□□ -0.59
NPM1-212ENST00000524204 EHBP1Q8NDI1 1231 aa11.34□□□□□ -0.59
NPM1-212ENST00000524204 SYMPKQ92797 1274 aaKnown RBP11.34□□□□□ -0.59
NPM1-212ENST00000524204 GUCA2AQ02747 115 aa11.33□□□□□ -0.6
NPM1-212ENST00000524204 P3H3Q8IVL6 736 aa11.32□□□□□ -0.6
NPM1-212ENST00000524204 KCTD17Q8N5Z5 321 aa11.32□□□□□ -0.6
NPM1-212ENST00000524204 SOBPA7XYQ1 873 aa11.31□□□□□ -0.6
NPM1-212ENST00000524204 JUNDP17535 347 aa11.31□□□□□ -0.6
NPM1-212ENST00000524204 SH3BP2P78314 561 aa11.3□□□□□ -0.6
NPM1-212ENST00000524204 HOXA2O43364 376 aa11.28□□□□□ -0.6
NPM1-212ENST00000524204 KCNMA1Q12791 1236 aa11.28□□□□□ -0.6
NPM1-212ENST00000524204 NUDT12Q9BQG2 462 aa11.28□□□□□ -0.6
NPM1-212ENST00000524204 VSIG8P0DPA2 414 aa11.27□□□□□ -0.61
NPM1-212ENST00000524204 TLL2Q9Y6L7 1015 aa11.26□□□□□ -0.61
NPM1-212ENST00000524204 PURBQ96QR8 312 aaKnown RBP11.25□□□□□ -0.61
NPM1-212ENST00000524204 USP46P62068 366 aa11.24□□□□□ -0.61
NPM1-212ENST00000524204 SMYD5Q6GMV2 418 aa11.24□□□□□ -0.61
NPM1-212ENST00000524204 MRPL14Q6P1L8 145 aaKnown RBP11.24□□□□□ -0.61
NPM1-212ENST00000524204 SLC24A1O60721 1099 aa11.21□□□□□ -0.61
NPM1-212ENST00000524204 NNTQ13423 1086 aa11.21□□□□□ -0.61
NPM1-212ENST00000524204 TIMP2P16035 220 aa11.2□□□□□ -0.62
NPM1-212ENST00000524204 LINC01559Q495D7 138 aa11.2□□□□□ -0.62
NPM1-212ENST00000524204 MDM2Q00987 491 aaPredicted RBP11.19□□□□□ -0.62
NPM1-212ENST00000524204 BAP1Q92560 729 aa11.19□□□□□ -0.62
NPM1-212ENST00000524204 SCARF1Q14162 830 aa11.18□□□□□ -0.62
NPM1-212ENST00000524204 RETREG3Q86VR2 466 aa11.18□□□□□ -0.62
NPM1-212ENST00000524204 KLF16Q9BXK1 252 aaPredicted RBP11.18□□□□□ -0.62
NPM1-212ENST00000524204 UNC93B1Q9H1C4 597 aa11.17□□□□□ -0.62
NPM1-212ENST00000524204 RTN4Q9NQC3 1192 aaKnown RBP11.17□□□□□ -0.62
NPM1-212ENST00000524204 WDR4P57081 412 aaKnown RBP11.16□□□□□ -0.62
NPM1-212ENST00000524204 GPIHBP1Q8IV16 184 aa11.16□□□□□ -0.62
NPM1-212ENST00000524204 PCDHGC3Q9UN70 934 aa11.16□□□□□ -0.62
NPM1-212ENST00000524204 CCNYL3P0C7X3 344 aa11.15□□□□□ -0.62
NPM1-212ENST00000524204 RASSF7Q02833 373 aa11.15□□□□□ -0.62
NPM1-212ENST00000524204 TMEM151AQ8N4L1 468 aa11.15□□□□□ -0.62
NPM1-212ENST00000524204 PPFIA3O75145 1194 aa11.14□□□□□ -0.63
NPM1-212ENST00000524204 GDF11O95390 407 aa11.14□□□□□ -0.63
NPM1-212ENST00000524204 ADH1CP00326 375 aa11.13□□□□□ -0.63
NPM1-212ENST00000524204 MS4A1P11836 297 aa11.13□□□□□ -0.63
NPM1-212ENST00000524204 MPNDQ8N594 471 aa11.13□□□□□ -0.63
NPM1-212ENST00000524204 EVA1BQ9NVM1 165 aa11.13□□□□□ -0.63
NPM1-212ENST00000524204 KRT76Q01546 638 aa11.12□□□□□ -0.63
NPM1-212ENST00000524204 AMER1Q5JTC6 1135 aaPredicted RBP11.12□□□□□ -0.63
NPM1-212ENST00000524204 PLEKHG3A1L390 1219 aa11.11□□□□□ -0.63
NPM1-212ENST00000524204 VARSP26640 1264 aaKnown RBP11.11□□□□□ -0.63
NPM1-212ENST00000524204 MAP2K5Q13163 448 aa11.11□□□□□ -0.63
NPM1-212ENST00000524204 ZNF511Q8NB15 262 aa11.11□□□□□ -0.63
NPM1-212ENST00000524204 GPR161Q8N6U8 529 aaKnown RBP11.1□□□□□ -0.63
NPM1-212ENST00000524204 ZFAND3Q9H8U3 227 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms