RNA–Protein interactions for RNA: ENST00000524162.5

TRAPPC9-215, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-215ENST00000524162 WAPLQ7Z5K2 1190 aa30.25■■■□□ 2.43
TRAPPC9-215ENST00000524162 DISP3Q9P2K9 1392 aa30.22■■■□□ 2.43
TRAPPC9-215ENST00000524162 PLEKHH1Q9ULM0 1364 aa30.22■■■□□ 2.43
TRAPPC9-215ENST00000524162 JCADQ9P266 1359 aa30.21■■■□□ 2.43
TRAPPC9-215ENST00000524162 FMN2Q9NZ56 1722 aa30.2■■■□□ 2.43
TRAPPC9-215ENST00000524162 ADGRB2O60241 1585 aa30.19■■■□□ 2.42
TRAPPC9-215ENST00000524162 SHPRHQ149N8 1683 aa30.17■■■□□ 2.42
TRAPPC9-215ENST00000524162 L3MBTL2Q969R5 705 aa30.17■■■□□ 2.42
TRAPPC9-215ENST00000524162 SIN3AQ96ST3 1273 aa30.17■■■□□ 2.42
TRAPPC9-215ENST00000524162 PRAM1Q96QH2 718 aa30.16■■■□□ 2.42
TRAPPC9-215ENST00000524162 ARHGEF28Q8N1W1 1705 aaKnown RBP30.15■■■□□ 2.42
TRAPPC9-215ENST00000524162 POGKQ9P215 609 aa30.13■■■□□ 2.41
TRAPPC9-215ENST00000524162 TRAK1Q9UPV9 953 aa30.12■■■□□ 2.41
TRAPPC9-215ENST00000524162 ORAI2Q96SN7 254 aa30.1■■■□□ 2.41
TRAPPC9-215ENST00000524162 SPATA31A6Q5VVP1 1343 aa30.1■■■□□ 2.41
TRAPPC9-215ENST00000524162 KIF1AQ12756 1690 aa30.09■■■□□ 2.41
TRAPPC9-215ENST00000524162 LRRC59Q96AG4 307 aaKnown RBP30.09■■■□□ 2.41
TRAPPC9-215ENST00000524162 SOS2Q07890 1332 aaPredicted RBP30.08■■■□□ 2.41
TRAPPC9-215ENST00000524162 NEUROD1Q13562 356 aa30.08■■■□□ 2.41
TRAPPC9-215ENST00000524162 TRPM1Q7Z4N2 1603 aa30.07■■■□□ 2.4
TRAPPC9-215ENST00000524162 ANKARQ7Z5J8 1434 aa30.06■■■□□ 2.4
TRAPPC9-215ENST00000524162 EIF3AQ14152 1382 aaKnown RBP30.06■■■□□ 2.4
TRAPPC9-215ENST00000524162 NPHP3Q7Z494 1330 aa30.05■■■□□ 2.4
TRAPPC9-215ENST00000524162 RGPD8O14715 1765 aaPredicted RBP30.05■■■□□ 2.4
TRAPPC9-215ENST00000524162 ESCO1Q5FWF5 840 aa30.04■■■□□ 2.4
TRAPPC9-215ENST00000524162 NBPF1Q3BBV0 1214 aa30.02■■■□□ 2.4
TRAPPC9-215ENST00000524162 SAFB2Q14151 953 aaKnown RBP eCLIP30■■■□□ 2.39
TRAPPC9-215ENST00000524162 USP32Q8NFA0 1604 aa29.99■■■□□ 2.39
TRAPPC9-215ENST00000524162 PXDNQ92626 1479 aa29.99■■■□□ 2.39
TRAPPC9-215ENST00000524162 TONSLQ96HA7 1378 aa29.98■■■□□ 2.39
TRAPPC9-215ENST00000524162 CLSPNQ9HAW4 1339 aa29.97■■■□□ 2.39
TRAPPC9-215ENST00000524162 TULP4Q9NRJ4 1543 aa29.97■■■□□ 2.39
TRAPPC9-215ENST00000524162 WASLO00401 505 aaPredicted RBP29.97■■■□□ 2.39
TRAPPC9-215ENST00000524162 DDX17Q92841 729 aaKnown RBP29.97■■■□□ 2.39
TRAPPC9-215ENST00000524162 PHF23Q9BUL5 403 aaPredicted RBP29.97■■■□□ 2.39
TRAPPC9-215ENST00000524162 PNPLA6Q8IY17 1366 aa29.97■■■□□ 2.39
TRAPPC9-215ENST00000524162 COL22A1Q8NFW1 1626 aaPredicted RBP29.95■■■□□ 2.38
TRAPPC9-215ENST00000524162 MINK1Q8N4C8 1332 aaPredicted RBP29.95■■■□□ 2.38
TRAPPC9-215ENST00000524162 GPRASP1Q5JY77 1395 aa29.94■■■□□ 2.38
TRAPPC9-215ENST00000524162 NUTM2FA1L443 756 aa29.94■■■□□ 2.38
TRAPPC9-215ENST00000524162 FOXO3O43524 673 aa29.93■■■□□ 2.38
TRAPPC9-215ENST00000524162 PHF8Q9UPP1 1060 aa29.93■■■□□ 2.38
TRAPPC9-215ENST00000524162 ITSN1Q15811 1721 aa29.92■■■□□ 2.38
TRAPPC9-215ENST00000524162 LRP6O75581 1613 aa29.92■■■□□ 2.38
TRAPPC9-215ENST00000524162 HIRIP3Q9BW71 556 aaPredicted RBP29.9■■■□□ 2.38
TRAPPC9-215ENST00000524162 CENPJQ9HC77 1338 aaPredicted RBP29.9■■■□□ 2.38
TRAPPC9-215ENST00000524162 ROCK2O75116 1388 aaKnown RBP29.9■■■□□ 2.38
TRAPPC9-215ENST00000524162 PCGF6Q9BYE7 350 aa29.89■■■□□ 2.38
TRAPPC9-215ENST00000524162 ILDR2Q71H61 639 aa29.88■■■□□ 2.37
TRAPPC9-215ENST00000524162 QRICH2Q9H0J4 1663 aa29.88■■■□□ 2.37
TRAPPC9-215ENST00000524162 NBPF8Q3BBV2 869 aa29.87■■■□□ 2.37
TRAPPC9-215ENST00000524162 RGS17Q9UGC6 210 aaPredicted RBP29.87■■■□□ 2.37
TRAPPC9-215ENST00000524162 RALGAPBQ86X10 1494 aa29.87■■■□□ 2.37
TRAPPC9-215ENST00000524162 TIMELESSQ9UNS1 1208 aa29.86■■■□□ 2.37
TRAPPC9-215ENST00000524162 ATP7BP35670 1465 aa29.86■■■□□ 2.37
TRAPPC9-215ENST00000524162 PRR36Q9H6K5 1346 aa29.85■■■□□ 2.37
TRAPPC9-215ENST00000524162 PSME1Q06323 249 aa29.84■■■□□ 2.37
TRAPPC9-215ENST00000524162 SBNO1A3KN83 1393 aa29.83■■■□□ 2.37
TRAPPC9-215ENST00000524162 TOPAZ1Q8N9V7 1692 aa29.82■■■□□ 2.36
TRAPPC9-215ENST00000524162 SPATA31A3Q5VYP0 1347 aa29.82■■■□□ 2.36
TRAPPC9-215ENST00000524162 KRT28Q7Z3Y7 464 aa29.82■■■□□ 2.36
TRAPPC9-215ENST00000524162 CDK19Q9BWU1 502 aa29.82■■■□□ 2.36
TRAPPC9-215ENST00000524162 MEX3CQ5U5Q3 659 aaKnown RBP29.79■■■□□ 2.36
TRAPPC9-215ENST00000524162 NUDT16Q96DE0 195 aaKnown RBP29.79■■■□□ 2.36
TRAPPC9-215ENST00000524162 SBNO2Q9Y2G9 1366 aa29.78■■■□□ 2.36
TRAPPC9-215ENST00000524162 CCDC61Q9Y6R9 512 aa29.78■■■□□ 2.36
TRAPPC9-215ENST00000524162 TNS3Q68CZ2 1445 aa29.78■■■□□ 2.36
TRAPPC9-215ENST00000524162 TRPM3Q9HCF6 1732 aaPredicted RBP29.77■■■□□ 2.36
TRAPPC9-215ENST00000524162 XPCQ01831 940 aaPredicted RBP29.76■■■□□ 2.35
TRAPPC9-215ENST00000524162 ZNF772Q68DY9 489 aaPredicted RBP29.76■■■□□ 2.35
TRAPPC9-215ENST00000524162 MARF1Q9Y4F3 1742 aaKnown RBP29.76■■■□□ 2.35
TRAPPC9-215ENST00000524162 NUTM2BA6NNL0 878 aaPredicted RBP29.75■■■□□ 2.35
TRAPPC9-215ENST00000524162 NUTM2EB1AL46 878 aaPredicted RBP29.75■■■□□ 2.35
TRAPPC9-215ENST00000524162 NUTM2AQ8IVF1 878 aaPredicted RBP29.75■■■□□ 2.35
TRAPPC9-215ENST00000524162 PMFBP1Q8TBY8 1022 aa29.75■■■□□ 2.35
TRAPPC9-215ENST00000524162 ARHGEF10O15013 1369 aa29.75■■■□□ 2.35
TRAPPC9-215ENST00000524162 POLR3AO14802 1390 aaPredicted RBP29.74■■■□□ 2.35
TRAPPC9-215ENST00000524162 PLEKHG3A1L390 1219 aa29.73■■■□□ 2.35
TRAPPC9-215ENST00000524162 CARD11Q9BXL7 1154 aa29.73■■■□□ 2.35
TRAPPC9-215ENST00000524162 ALS2Q96Q42 1657 aa29.72■■■□□ 2.35
TRAPPC9-215ENST00000524162 EVC2Q86UK5 1308 aa29.71■■■□□ 2.35
TRAPPC9-215ENST00000524162 SOCS7O14512 581 aa29.69■■■□□ 2.34
TRAPPC9-215ENST00000524162 POTEAQ6S8J7 498 aa29.69■■■□□ 2.34
TRAPPC9-215ENST00000524162 NGDNQ8NEJ9 315 aaKnown RBP29.69■■■□□ 2.34
TRAPPC9-215ENST00000524162 SRPK2P78362 688 aaKnown RBP29.67■■■□□ 2.34
TRAPPC9-215ENST00000524162 BRD4O60885 1362 aaPredicted RBP29.65■■■□□ 2.34
TRAPPC9-215ENST00000524162 AFF2P51816 1311 aa29.65■■■□□ 2.34
TRAPPC9-215ENST00000524162 ABCA3Q99758 1704 aa29.65■■■□□ 2.34
TRAPPC9-215ENST00000524162 FNBP4Q8N3X1 1017 aaPredicted RBP29.64■■■□□ 2.34
TRAPPC9-215ENST00000524162 SLC24A1O60721 1099 aa29.63■■■□□ 2.33
TRAPPC9-215ENST00000524162 C8orf37Q96NL8 207 aa29.63■■■□□ 2.33
TRAPPC9-215ENST00000524162 PPIP5K1Q6PFW1 1433 aa29.62■■■□□ 2.33
TRAPPC9-215ENST00000524162 ADAMTS2O95450 1211 aa29.62■■■□□ 2.33
TRAPPC9-215ENST00000524162 CABP2Q9NPB3 220 aa29.62■■■□□ 2.33
TRAPPC9-215ENST00000524162 ACEP12821 1306 aa29.62■■■□□ 2.33
TRAPPC9-215ENST00000524162 NGLY1Q96IV0 654 aa29.61■■■□□ 2.33
TRAPPC9-215ENST00000524162 PUS7Q96PZ0 661 aaKnown RBP29.59■■■□□ 2.33
TRAPPC9-215ENST00000524162 ATAD2Q6PL18 1390 aa29.59■■■□□ 2.33
TRAPPC9-215ENST00000524162 CRYBG1Q9Y4K1 1723 aa29.59■■■□□ 2.33
TRAPPC9-215ENST00000524162 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.57■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms