RNA–Protein interactions for RNA: ENST00000524094.1

LINC01339-204, Transcript of long intergenic non-protein coding RNA 1339, humanhuman

TSL 3

Gene LINC01339, Length 269 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01339-204ENST00000524094 FECHP22830 423 aa5.69□□□□□ -1.5
LINC01339-204ENST00000524094 HDGFP51858 240 aaKnown RBP5.69□□□□□ -1.5
LINC01339-204ENST00000524094 NEUROD2Q15784 382 aa5.69□□□□□ -1.5
LINC01339-204ENST00000524094 AK7Q96M32 723 aa5.69□□□□□ -1.5
LINC01339-204ENST00000524094 KRTAP4-2Q9BYR5 136 aa5.69□□□□□ -1.5
LINC01339-204ENST00000524094 GPBP1L1Q9HC44 474 aaPredicted RBP5.69□□□□□ -1.5
LINC01339-204ENST00000524094 PCDHB3Q9Y5E6 796 aa5.69□□□□□ -1.5
LINC01339-204ENST00000524094 K7ELQ4 463 aaPredicted RBP5.68□□□□□ -1.5
LINC01339-204ENST00000524094 MAP3K9P80192 1104 aa5.68□□□□□ -1.5
LINC01339-204ENST00000524094 KANK3Q6NY19 840 aa5.68□□□□□ -1.5
LINC01339-204ENST00000524094 BLOC1S3Q6QNY0 202 aa5.68□□□□□ -1.5
LINC01339-204ENST00000524094 VSIG8P0DPA2 414 aa5.67□□□□□ -1.5
LINC01339-204ENST00000524094 GPIHBP1Q8IV16 184 aa5.67□□□□□ -1.5
LINC01339-204ENST00000524094 SPOCK3Q9BQ16 436 aa5.66□□□□□ -1.5
LINC01339-204ENST00000524094 KRTAP4-9Q9BYQ8 210 aa5.66□□□□□ -1.5
LINC01339-204ENST00000524094 NPDC1Q9NQX5 325 aaPredicted RBP5.66□□□□□ -1.5
LINC01339-204ENST00000524094 GRXCR2A6NFK2 248 aa5.65□□□□□ -1.5
LINC01339-204ENST00000524094 CD2BP2O95400 341 aaKnown RBP5.65□□□□□ -1.5
LINC01339-204ENST00000524094 RPIAP49247 311 aa5.65□□□□□ -1.5
LINC01339-204ENST00000524094 PDE4DQ08499 809 aa5.65□□□□□ -1.5
LINC01339-204ENST00000524094 IRF6O14896 467 aa5.64□□□□□ -1.51
LINC01339-204ENST00000524094 KDM4CQ9H3R0 1056 aa5.64□□□□□ -1.51
LINC01339-204ENST00000524094 GOLGA2P5Q9HBQ8 144 aa5.64□□□□□ -1.51
LINC01339-204ENST00000524094 PLEKHG3A1L390 1219 aa5.63□□□□□ -1.51
LINC01339-204ENST00000524094 DDX12PQ92771 950 aa5.63□□□□□ -1.51
LINC01339-204ENST00000524094 HPS1Q92902 700 aa5.63□□□□□ -1.51
LINC01339-204ENST00000524094 EPAS1Q99814 870 aa5.63□□□□□ -1.51
LINC01339-204ENST00000524094 IL27Q8NEV9 243 aa5.62□□□□□ -1.51
LINC01339-204ENST00000524094 SNIP1Q8TAD8 396 aaKnown RBP5.62□□□□□ -1.51
LINC01339-204ENST00000524094 TATDN2Q93075 761 aa5.62□□□□□ -1.51
LINC01339-204ENST00000524094 RBM33Q96EV2 1170 aaKnown RBP5.62□□□□□ -1.51
LINC01339-204ENST00000524094 REPIN1Q9BWE0 567 aaKnown RBP5.62□□□□□ -1.51
LINC01339-204ENST00000524094 FAM117AQ9C073 453 aa5.62□□□□□ -1.51
LINC01339-204ENST00000524094 MINK1Q8N4C8 1332 aaPredicted RBP5.62□□□□□ -1.51
LINC01339-204ENST00000524094 C3orf80F5H4A9 247 aa5.61□□□□□ -1.51
LINC01339-204ENST00000524094 J3QL48 77 aa5.61□□□□□ -1.51
LINC01339-204ENST00000524094 ADH1BP00325 375 aa5.61□□□□□ -1.51
LINC01339-204ENST00000524094 PTGDRQ13258 359 aa5.61□□□□□ -1.51
LINC01339-204ENST00000524094 PLA2G4EQ3MJ16 856 aa5.61□□□□□ -1.51
LINC01339-204ENST00000524094 KRI1Q8N9T8 703 aaKnown RBP5.61□□□□□ -1.51
LINC01339-204ENST00000524094 PRR14Q9BWN1 585 aa5.61□□□□□ -1.51
LINC01339-204ENST00000524094 SLC6A16Q9GZN6 736 aa5.61□□□□□ -1.51
LINC01339-204ENST00000524094 PNMA3Q9UL41 463 aa5.61□□□□□ -1.51
LINC01339-204ENST00000524094 GNPATO15228 680 aa5.6□□□□□ -1.51
LINC01339-204ENST00000524094 AMHR2Q16671 573 aa5.6□□□□□ -1.51
LINC01339-204ENST00000524094 SLF2Q8IX21 1173 aa5.6□□□□□ -1.51
LINC01339-204ENST00000524094 CCDC102AQ96A19 550 aa5.6□□□□□ -1.51
LINC01339-204ENST00000524094 PHOX2BQ99453 314 aa5.6□□□□□ -1.51
LINC01339-204ENST00000524094 MAP2K5Q13163 448 aa5.59□□□□□ -1.51
LINC01339-204ENST00000524094 GALNT6Q8NCL4 622 aa5.59□□□□□ -1.51
LINC01339-204ENST00000524094 FAM198AQ9UFP1 575 aa5.59□□□□□ -1.51
LINC01339-204ENST00000524094 NUTM2FA1L443 756 aa5.58□□□□□ -1.52
LINC01339-204ENST00000524094 NBPF26B4DH59 902 aa5.58□□□□□ -1.52
LINC01339-204ENST00000524094 PROCP04070 461 aa5.58□□□□□ -1.52
LINC01339-204ENST00000524094 PARP9Q8IXQ6 854 aa5.58□□□□□ -1.52
LINC01339-204ENST00000524094 CDCA7LQ96GN5 454 aa5.58□□□□□ -1.52
LINC01339-204ENST00000524094 CDHR5Q9HBB8 845 aa5.58□□□□□ -1.52
LINC01339-204ENST00000524094 HIC1Q14526 733 aa5.57□□□□□ -1.52
LINC01339-204ENST00000524094 FCHSD2O94868 740 aa5.56□□□□□ -1.52
LINC01339-204ENST00000524094 ITGB2P05107 769 aa5.56□□□□□ -1.52
LINC01339-204ENST00000524094 MARSP56192 900 aaKnown RBP5.56□□□□□ -1.52
LINC01339-204ENST00000524094 SWT1Q5T5J6 900 aaKnown RBP5.56□□□□□ -1.52
LINC01339-204ENST00000524094 TRIM46Q7Z4K8 759 aa5.56□□□□□ -1.52
LINC01339-204ENST00000524094 BMP1P13497 986 aa5.55□□□□□ -1.52
LINC01339-204ENST00000524094 EN1Q05925 392 aaPredicted RBP5.55□□□□□ -1.52
LINC01339-204ENST00000524094 TSR1Q2NL82 804 aaKnown RBP5.55□□□□□ -1.52
LINC01339-204ENST00000524094 SCARF2Q96GP6 870 aaPredicted RBP5.55□□□□□ -1.52
LINC01339-204ENST00000524094 MS4A1P11836 297 aa5.54□□□□□ -1.52
LINC01339-204ENST00000524094 PRSS12P56730 875 aa5.54□□□□□ -1.52
LINC01339-204ENST00000524094 ZNF385CQ66K41 422 aaPredicted RBP5.54□□□□□ -1.52
LINC01339-204ENST00000524094 SVOPQ8N4V2 548 aa5.54□□□□□ -1.52
LINC01339-204ENST00000524094 TTC13Q8NBP0 860 aa5.54□□□□□ -1.52
LINC01339-204ENST00000524094 WNT7AO00755 349 aa5.53□□□□□ -1.52
LINC01339-204ENST00000524094 C14orf37Q86TY3 774 aa5.53□□□□□ -1.52
LINC01339-204ENST00000524094 NUDT18Q6ZVK8 323 aa5.52□□□□□ -1.53
LINC01339-204ENST00000524094 SLC4A3P48751 1232 aa5.51□□□□□ -1.53
LINC01339-204ENST00000524094 FAM161AQ3B820 660 aa5.51□□□□□ -1.53
LINC01339-204ENST00000524094 ERICH6Q7L0X2 663 aa5.51□□□□□ -1.53
LINC01339-204ENST00000524094 COBLO75128 1261 aa5.5□□□□□ -1.53
LINC01339-204ENST00000524094 KRT76Q01546 638 aa5.5□□□□□ -1.53
LINC01339-204ENST00000524094 CNTNAP3BQ96NU0 1288 aa5.5□□□□□ -1.53
LINC01339-204ENST00000524094 CNTNAP3Q9BZ76 1288 aa5.5□□□□□ -1.53
LINC01339-204ENST00000524094 SUPT5HO00267 1087 aaKnown RBP5.49□□□□□ -1.53
LINC01339-204ENST00000524094 ARHGEF15O94989 841 aa5.49□□□□□ -1.53
LINC01339-204ENST00000524094 FBXO31Q5XUX0 539 aaPredicted RBP5.49□□□□□ -1.53
LINC01339-204ENST00000524094 GIGYF2Q6Y7W6 1299 aaKnown RBP5.49□□□□□ -1.53
LINC01339-204ENST00000524094 DCAF5Q96JK2 942 aa5.49□□□□□ -1.53
LINC01339-204ENST00000524094 MRGPRX2Q96LB1 330 aa5.49□□□□□ -1.53
LINC01339-204ENST00000524094 NLRP7Q8WX94 980 aa5.48□□□□□ -1.53
LINC01339-204ENST00000524094 GOPCQ9HD26 462 aa5.48□□□□□ -1.53
LINC01339-204ENST00000524094 FCF1Q9Y324 198 aaKnown RBP5.48□□□□□ -1.53
LINC01339-204ENST00000524094 MAP3K7O43318 606 aa5.47□□□□□ -1.53
LINC01339-204ENST00000524094 FURINP09958 794 aa5.47□□□□□ -1.53
LINC01339-204ENST00000524094 SLURP2P0DP57 97 aa5.47□□□□□ -1.53
LINC01339-204ENST00000524094 BAG6P46379 1132 aa5.47□□□□□ -1.53
LINC01339-204ENST00000524094 KRTAP5-3Q6L8H2 238 aa5.47□□□□□ -1.53
LINC01339-204ENST00000524094 ZFP42Q96MM3 310 aa5.47□□□□□ -1.53
LINC01339-204ENST00000524094 ZMYND15Q9H091 742 aa5.47□□□□□ -1.53
LINC01339-204ENST00000524094 ADGRG1Q9Y653 693 aa5.47□□□□□ -1.53
LINC01339-204ENST00000524094 NR1I2O75469 434 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms