RNA–Protein interactions for RNA: ENST00000523952.5

PTPN12-216, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 4

Gene PTPN12, Length 500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-216ENST00000523952 EP400Q96L91 3159 aa14.33□□□□□ -0.12
PTPN12-216ENST00000523952 NUP155O75694 1391 aa14.33□□□□□ -0.12
PTPN12-216ENST00000523952 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.32□□□□□ -0.12
PTPN12-216ENST00000523952 CCDC125Q86Z20 511 aa14.32□□□□□ -0.12
PTPN12-216ENST00000523952 METP08581 1390 aa14.32□□□□□ -0.12
PTPN12-216ENST00000523952 C1orf167Q5SNV9 1468 aa14.31□□□□□ -0.12
PTPN12-216ENST00000523952 ATRNO75882 1429 aa14.3□□□□□ -0.12
PTPN12-216ENST00000523952 NEXMIFQ5QGS0 1516 aa14.29□□□□□ -0.12
PTPN12-216ENST00000523952 CLTCL1P53675 1640 aa14.29□□□□□ -0.12
PTPN12-216ENST00000523952 SOS2Q07890 1332 aaPredicted RBP14.27□□□□□ -0.12
PTPN12-216ENST00000523952 SF3B2Q13435 895 aaKnown RBP14.27□□□□□ -0.13
PTPN12-216ENST00000523952 FNBP4Q8N3X1 1017 aaPredicted RBP14.27□□□□□ -0.13
PTPN12-216ENST00000523952 ORAI2Q96SN7 254 aa14.27□□□□□ -0.13
PTPN12-216ENST00000523952 ROCK1Q13464 1354 aa14.26□□□□□ -0.13
PTPN12-216ENST00000523952 PPLO60437 1756 aa14.26□□□□□ -0.13
PTPN12-216ENST00000523952 LRP5O75197 1615 aa14.26□□□□□ -0.13
PTPN12-216ENST00000523952 ITGAEP38570 1179 aa14.25□□□□□ -0.13
PTPN12-216ENST00000523952 NPHP3Q7Z494 1330 aa14.23□□□□□ -0.13
PTPN12-216ENST00000523952 ESCO1Q5FWF5 840 aa14.23□□□□□ -0.13
PTPN12-216ENST00000523952 GJD4Q96KN9 370 aaPredicted RBP14.23□□□□□ -0.13
PTPN12-216ENST00000523952 RGPD8O14715 1765 aaPredicted RBP14.23□□□□□ -0.13
PTPN12-216ENST00000523952 BLMP54132 1417 aaPredicted RBP14.23□□□□□ -0.13
PTPN12-216ENST00000523952 PLCH1Q4KWH8 1693 aa14.22□□□□□ -0.13
PTPN12-216ENST00000523952 CDC42BPGQ6DT37 1551 aa14.22□□□□□ -0.13
PTPN12-216ENST00000523952 MYOM2P54296 1465 aa14.21□□□□□ -0.13
PTPN12-216ENST00000523952 BCL9LQ86UU0 1499 aa14.21□□□□□ -0.13
PTPN12-216ENST00000523952 GLI3P10071 1580 aa14.21□□□□□ -0.14
PTPN12-216ENST00000523952 NWD2Q9ULI1 1742 aa14.21□□□□□ -0.14
PTPN12-216ENST00000523952 KIF1AQ12756 1690 aa14.2□□□□□ -0.14
PTPN12-216ENST00000523952 VGFO15240 615 aaPredicted RBP14.2□□□□□ -0.14
PTPN12-216ENST00000523952 HFM1A2PYH4 1435 aa14.2□□□□□ -0.14
PTPN12-216ENST00000523952 LRPPRCP42704 1394 aaKnown RBP14.2□□□□□ -0.14
PTPN12-216ENST00000523952 ROBO2Q9HCK4 1378 aa14.2□□□□□ -0.14
PTPN12-216ENST00000523952 USP32Q8NFA0 1604 aa14.19□□□□□ -0.14
PTPN12-216ENST00000523952 IFT172Q9UG01 1749 aa14.19□□□□□ -0.14
PTPN12-216ENST00000523952 HAP1P54257 671 aaPredicted RBP14.19□□□□□ -0.14
PTPN12-216ENST00000523952 PXDNQ92626 1479 aa14.18□□□□□ -0.14
PTPN12-216ENST00000523952 XPCQ01831 940 aaPredicted RBP14.18□□□□□ -0.14
PTPN12-216ENST00000523952 RGPD1P0DJD0 1748 aa14.18□□□□□ -0.14
PTPN12-216ENST00000523952 FMN2Q9NZ56 1722 aa14.18□□□□□ -0.14
PTPN12-216ENST00000523952 RALGAPBQ86X10 1494 aa14.18□□□□□ -0.14
PTPN12-216ENST00000523952 FOXO3O43524 673 aa14.17□□□□□ -0.14
PTPN12-216ENST00000523952 UNC5CLQ8IV45 518 aa14.17□□□□□ -0.14
PTPN12-216ENST00000523952 CCDC9Q9Y3X0 531 aaKnown RBP14.17□□□□□ -0.14
PTPN12-216ENST00000523952 ABCA3Q99758 1704 aa14.16□□□□□ -0.14
PTPN12-216ENST00000523952 DEFB132Q7Z7B7 95 aa14.16□□□□□ -0.14
PTPN12-216ENST00000523952 KNDC1Q76NI1 1749 aa14.15□□□□□ -0.14
PTPN12-216ENST00000523952 A0A0G2JS52 829 aa14.15□□□□□ -0.14
PTPN12-216ENST00000523952 MYT1Q01538 1121 aa14.15□□□□□ -0.14
PTPN12-216ENST00000523952 NUTM2FA1L443 756 aa14.14□□□□□ -0.15
PTPN12-216ENST00000523952 SLIT2O94813 1529 aa14.13□□□□□ -0.15
PTPN12-216ENST00000523952 PRAG1Q86YV5 1406 aa14.13□□□□□ -0.15
PTPN12-216ENST00000523952 PLEKHG5O94827 1062 aa14.12□□□□□ -0.15
PTPN12-216ENST00000523952 SEPT12Q8IYM1 358 aa14.12□□□□□ -0.15
PTPN12-216ENST00000523952 NAIPQ13075 1403 aa14.12□□□□□ -0.15
PTPN12-216ENST00000523952 RPGRIP1LQ68CZ1 1315 aa14.12□□□□□ -0.15
PTPN12-216ENST00000523952 CCDC144AA2RUR9 1427 aa14.11□□□□□ -0.15
PTPN12-216ENST00000523952 PSDA5PKW4 1024 aaPredicted RBP14.11□□□□□ -0.15
PTPN12-216ENST00000523952 BAG6P46379 1132 aa14.11□□□□□ -0.15
PTPN12-216ENST00000523952 KRT27Q7Z3Y8 459 aa14.1□□□□□ -0.15
PTPN12-216ENST00000523952 STK26Q9P289 416 aa14.09□□□□□ -0.15
PTPN12-216ENST00000523952 NRAPQ86VF7 1730 aa14.08□□□□□ -0.16
PTPN12-216ENST00000523952 LMOD2Q6P5Q4 547 aa14.08□□□□□ -0.16
PTPN12-216ENST00000523952 SPATA31A3Q5VYP0 1347 aa14.08□□□□□ -0.16
PTPN12-216ENST00000523952 PSME1Q06323 249 aa14.07□□□□□ -0.16
PTPN12-216ENST00000523952 VPS72Q15906 364 aa14.07□□□□□ -0.16
PTPN12-216ENST00000523952 KRT28Q7Z3Y7 464 aa14.07□□□□□ -0.16
PTPN12-216ENST00000523952 TNS1Q9HBL0 1735 aaKnown RBP14.07□□□□□ -0.16
PTPN12-216ENST00000523952 TNS3Q68CZ2 1445 aa14.06□□□□□ -0.16
PTPN12-216ENST00000523952 COL14A1Q05707 1796 aaKnown RBP14.05□□□□□ -0.16
PTPN12-216ENST00000523952 HRCP23327 699 aa14.05□□□□□ -0.16
PTPN12-216ENST00000523952 WAPLQ7Z5K2 1190 aa14.05□□□□□ -0.16
PTPN12-216ENST00000523952 POTEHQ6S545 545 aa14.04□□□□□ -0.16
PTPN12-216ENST00000523952 CABLES1Q8TDN4 633 aa14.04□□□□□ -0.16
PTPN12-216ENST00000523952 ADGRB2O60241 1585 aa14.04□□□□□ -0.16
PTPN12-216ENST00000523952 RRBP1Q9P2E9 1410 aaKnown RBP14.03□□□□□ -0.16
PTPN12-216ENST00000523952 TECPR2O15040 1411 aa14.02□□□□□ -0.16
PTPN12-216ENST00000523952 SLC4A1APQ9BWU0 796 aaKnown RBP14.02□□□□□ -0.17
PTPN12-216ENST00000523952 ARHGEF10O15013 1369 aa14.01□□□□□ -0.17
PTPN12-216ENST00000523952 EN1Q05925 392 aaPredicted RBP14.01□□□□□ -0.17
PTPN12-216ENST00000523952 R3HDM1Q15032 1099 aaKnown RBP14.01□□□□□ -0.17
PTPN12-216ENST00000523952 FAM98CQ17RN3 349 aaKnown RBP14.01□□□□□ -0.17
PTPN12-216ENST00000523952 PPARGC1BQ86YN6 1023 aaKnown RBP14.01□□□□□ -0.17
PTPN12-216ENST00000523952 PHF8Q9UPP1 1060 aa14.01□□□□□ -0.17
PTPN12-216ENST00000523952 ONECUT3O60422 494 aaPredicted RBP14□□□□□ -0.17
PTPN12-216ENST00000523952 PLEKHH1Q9ULM0 1364 aa13.99□□□□□ -0.17
PTPN12-216ENST00000523952 RGL3Q3MIN7 710 aa13.99□□□□□ -0.17
PTPN12-216ENST00000523952 TMEM132EQ6IEE7 984 aa13.99□□□□□ -0.17
PTPN12-216ENST00000523952 TRPM3Q9HCF6 1732 aaPredicted RBP13.98□□□□□ -0.17
PTPN12-216ENST00000523952 ABCC11Q96J66 1382 aa13.98□□□□□ -0.17
PTPN12-216ENST00000523952 ALS2Q96Q42 1657 aa13.98□□□□□ -0.17
PTPN12-216ENST00000523952 ADGRF5Q8IZF2 1346 aa13.98□□□□□ -0.17
PTPN12-216ENST00000523952 NRXN1Q9ULB1 1477 aa13.98□□□□□ -0.17
PTPN12-216ENST00000523952 YTHDC2Q9H6S0 1430 aaKnown RBP13.98□□□□□ -0.17
PTPN12-216ENST00000523952 SBNO1A3KN83 1393 aa13.97□□□□□ -0.17
PTPN12-216ENST00000523952 ANKRD30BQ9BXX2 1392 aa13.97□□□□□ -0.17
PTPN12-216ENST00000523952 BTG4Q9NY30 223 aa13.97□□□□□ -0.17
PTPN12-216ENST00000523952 ITSN1Q15811 1721 aa13.96□□□□□ -0.17
PTPN12-216ENST00000523952 RREB1Q92766 1687 aa13.96□□□□□ -0.17
PTPN12-216ENST00000523952 THSD7AQ9UPZ6 1657 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms