RNA–Protein interactions for RNA: ENST00000523912.5

CTNNA1-240, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-240ENST00000523912 NALCNQ8IZF0 1738 aa13.06□□□□□ -0.32
CTNNA1-240ENST00000523912 LRPPRCP42704 1394 aaKnown RBP13.06□□□□□ -0.32
CTNNA1-240ENST00000523912 TECPR2O15040 1411 aa13.05□□□□□ -0.32
CTNNA1-240ENST00000523912 PIK3C2GO75747 1445 aa13.05□□□□□ -0.32
CTNNA1-240ENST00000523912 C8orf37Q96NL8 207 aa13.05□□□□□ -0.32
CTNNA1-240ENST00000523912 STK26Q9P289 416 aa13.05□□□□□ -0.32
CTNNA1-240ENST00000523912 RGS12O14924 1447 aa13.05□□□□□ -0.32
CTNNA1-240ENST00000523912 CDC42BPGQ6DT37 1551 aa13.03□□□□□ -0.32
CTNNA1-240ENST00000523912 FNBP4Q8N3X1 1017 aaPredicted RBP13.03□□□□□ -0.32
CTNNA1-240ENST00000523912 ABCC11Q96J66 1382 aa13.03□□□□□ -0.32
CTNNA1-240ENST00000523912 MYOM2P54296 1465 aa13.03□□□□□ -0.32
CTNNA1-240ENST00000523912 TRPC5Q9UL62 973 aaPredicted RBP13.02□□□□□ -0.33
CTNNA1-240ENST00000523912 ATAD2Q6PL18 1390 aa13.02□□□□□ -0.33
CTNNA1-240ENST00000523912 DDX17Q92841 729 aaKnown RBP13.01□□□□□ -0.33
CTNNA1-240ENST00000523912 NPHP3Q7Z494 1330 aa13.01□□□□□ -0.33
CTNNA1-240ENST00000523912 YTHDC2Q9H6S0 1430 aaKnown RBP13.01□□□□□ -0.33
CTNNA1-240ENST00000523912 IFT172Q9UG01 1749 aa13□□□□□ -0.33
CTNNA1-240ENST00000523912 DHX57Q6P158 1386 aaKnown RBP13□□□□□ -0.33
CTNNA1-240ENST00000523912 HRCP23327 699 aa13□□□□□ -0.33
CTNNA1-240ENST00000523912 ESCO1Q5FWF5 840 aa13□□□□□ -0.33
CTNNA1-240ENST00000523912 TMEM132EQ6IEE7 984 aa13□□□□□ -0.33
CTNNA1-240ENST00000523912 ORAI2Q96SN7 254 aa13□□□□□ -0.33
CTNNA1-240ENST00000523912 COL22A1Q8NFW1 1626 aaPredicted RBP12.99□□□□□ -0.33
CTNNA1-240ENST00000523912 NRXN1Q9ULB1 1477 aa12.99□□□□□ -0.33
CTNNA1-240ENST00000523912 ADAMTS2O95450 1211 aa12.99□□□□□ -0.33
CTNNA1-240ENST00000523912 WAPLQ7Z5K2 1190 aa12.99□□□□□ -0.33
CTNNA1-240ENST00000523912 CCDC125Q86Z20 511 aa12.99□□□□□ -0.33
CTNNA1-240ENST00000523912 C14orf93Q9H972 538 aaKnown RBP12.99□□□□□ -0.33
CTNNA1-240ENST00000523912 USP21Q9UK80 565 aa12.99□□□□□ -0.33
CTNNA1-240ENST00000523912 ATRNO75882 1429 aa12.98□□□□□ -0.33
CTNNA1-240ENST00000523912 SIRT1Q96EB6 747 aa12.98□□□□□ -0.33
CTNNA1-240ENST00000523912 KNDC1Q76NI1 1749 aa12.98□□□□□ -0.33
CTNNA1-240ENST00000523912 PLEKHH1Q9ULM0 1364 aa12.96□□□□□ -0.33
CTNNA1-240ENST00000523912 CFAP70Q5T0N1 1121 aa12.96□□□□□ -0.33
CTNNA1-240ENST00000523912 STAC3Q96MF2 364 aa12.96□□□□□ -0.33
CTNNA1-240ENST00000523912 POGKQ9P215 609 aa12.95□□□□□ -0.34
CTNNA1-240ENST00000523912 PXDNQ92626 1479 aa12.94□□□□□ -0.34
CTNNA1-240ENST00000523912 NUTM2FA1L443 756 aa12.94□□□□□ -0.34
CTNNA1-240ENST00000523912 FOXO3O43524 673 aa12.94□□□□□ -0.34
CTNNA1-240ENST00000523912 BCL9LQ86UU0 1499 aa12.93□□□□□ -0.34
CTNNA1-240ENST00000523912 DCAF11Q8TEB1 546 aa12.93□□□□□ -0.34
CTNNA1-240ENST00000523912 PRAM1Q96QH2 718 aa12.93□□□□□ -0.34
CTNNA1-240ENST00000523912 EIF3AQ14152 1382 aaKnown RBP12.93□□□□□ -0.34
CTNNA1-240ENST00000523912 DLC1Q96QB1 1528 aa12.93□□□□□ -0.34
CTNNA1-240ENST00000523912 ZRANB1Q9UGI0 708 aa12.92□□□□□ -0.34
CTNNA1-240ENST00000523912 KDM2AQ9Y2K7 1162 aa12.92□□□□□ -0.34
CTNNA1-240ENST00000523912 XPCQ01831 940 aaPredicted RBP12.91□□□□□ -0.34
CTNNA1-240ENST00000523912 SAFB2Q14151 953 aaKnown RBP eCLIP12.91□□□□□ -0.34
CTNNA1-240ENST00000523912 GJD4Q96KN9 370 aaPredicted RBP12.91□□□□□ -0.34
CTNNA1-240ENST00000523912 KIF1AQ12756 1690 aa12.91□□□□□ -0.34
CTNNA1-240ENST00000523912 PSME1Q06323 249 aa12.9□□□□□ -0.34
CTNNA1-240ENST00000523912 PHF8Q9UPP1 1060 aa12.9□□□□□ -0.34
CTNNA1-240ENST00000523912 FMN2Q9NZ56 1722 aa12.9□□□□□ -0.34
CTNNA1-240ENST00000523912 MARF1Q9Y4F3 1742 aaKnown RBP12.9□□□□□ -0.34
CTNNA1-240ENST00000523912 ANKARQ7Z5J8 1434 aa12.89□□□□□ -0.35
CTNNA1-240ENST00000523912 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.89□□□□□ -0.35
CTNNA1-240ENST00000523912 UNC5CLQ8IV45 518 aa12.89□□□□□ -0.35
CTNNA1-240ENST00000523912 ADGRB1O14514 1584 aa12.89□□□□□ -0.35
CTNNA1-240ENST00000523912 SPATA31A3Q5VYP0 1347 aa12.88□□□□□ -0.35
CTNNA1-240ENST00000523912 SLIT2O94813 1529 aa12.88□□□□□ -0.35
CTNNA1-240ENST00000523912 HAP1P54257 671 aaPredicted RBP12.88□□□□□ -0.35
CTNNA1-240ENST00000523912 TRAK1Q9UPV9 953 aa12.88□□□□□ -0.35
CTNNA1-240ENST00000523912 KRT28Q7Z3Y7 464 aa12.87□□□□□ -0.35
CTNNA1-240ENST00000523912 TNS3Q68CZ2 1445 aa12.87□□□□□ -0.35
CTNNA1-240ENST00000523912 ADGRB2O60241 1585 aa12.86□□□□□ -0.35
CTNNA1-240ENST00000523912 ARHGEF10O15013 1369 aa12.86□□□□□ -0.35
CTNNA1-240ENST00000523912 BLMP54132 1417 aaPredicted RBP12.86□□□□□ -0.35
CTNNA1-240ENST00000523912 SBNO1A3KN83 1393 aa12.85□□□□□ -0.35
CTNNA1-240ENST00000523912 MINK1Q8N4C8 1332 aaPredicted RBP12.85□□□□□ -0.35
CTNNA1-240ENST00000523912 RALGAPBQ86X10 1494 aa12.85□□□□□ -0.35
CTNNA1-240ENST00000523912 GPRASP1Q5JY77 1395 aa12.84□□□□□ -0.35
CTNNA1-240ENST00000523912 ONECUT3O60422 494 aaPredicted RBP12.84□□□□□ -0.35
CTNNA1-240ENST00000523912 LMOD2Q6P5Q4 547 aa12.84□□□□□ -0.35
CTNNA1-240ENST00000523912 HIRIP3Q9BW71 556 aaPredicted RBP12.84□□□□□ -0.35
CTNNA1-240ENST00000523912 VPS72Q15906 364 aa12.83□□□□□ -0.36
CTNNA1-240ENST00000523912 TULP4Q9NRJ4 1543 aa12.83□□□□□ -0.36
CTNNA1-240ENST00000523912 WASLO00401 505 aaPredicted RBP12.82□□□□□ -0.36
CTNNA1-240ENST00000523912 PMFBP1Q8TBY8 1022 aa12.82□□□□□ -0.36
CTNNA1-240ENST00000523912 GLI3P10071 1580 aa12.81□□□□□ -0.36
CTNNA1-240ENST00000523912 USP32Q8NFA0 1604 aa12.81□□□□□ -0.36
CTNNA1-240ENST00000523912 NGDNQ8NEJ9 315 aaKnown RBP12.8□□□□□ -0.36
CTNNA1-240ENST00000523912 NWD2Q9ULI1 1742 aa12.79□□□□□ -0.36
CTNNA1-240ENST00000523912 SF3B2Q13435 895 aaKnown RBP12.79□□□□□ -0.36
CTNNA1-240ENST00000523912 PLEKHG5O94827 1062 aa12.78□□□□□ -0.36
CTNNA1-240ENST00000523912 SEPT12Q8IYM1 358 aa12.78□□□□□ -0.36
CTNNA1-240ENST00000523912 PRR36Q9H6K5 1346 aa12.77□□□□□ -0.37
CTNNA1-240ENST00000523912 PAK3O75914 559 aaPredicted RBP12.76□□□□□ -0.37
CTNNA1-240ENST00000523912 KRT27Q7Z3Y8 459 aa12.76□□□□□ -0.37
CTNNA1-240ENST00000523912 CABLES1Q8TDN4 633 aa12.76□□□□□ -0.37
CTNNA1-240ENST00000523912 NUDT16Q96DE0 195 aaKnown RBP12.76□□□□□ -0.37
CTNNA1-240ENST00000523912 KIAA1210Q9ULL0 1709 aa12.76□□□□□ -0.37
CTNNA1-240ENST00000523912 ATP7BP35670 1465 aa12.75□□□□□ -0.37
CTNNA1-240ENST00000523912 BRWD3Q6RI45 1802 aa12.75□□□□□ -0.37
CTNNA1-240ENST00000523912 ARHGEF28Q8N1W1 1705 aaKnown RBP12.75□□□□□ -0.37
CTNNA1-240ENST00000523912 CDK19Q9BWU1 502 aa12.75□□□□□ -0.37
CTNNA1-240ENST00000523912 CCDC9Q9Y3X0 531 aaKnown RBP12.75□□□□□ -0.37
CTNNA1-240ENST00000523912 CENPJQ9HC77 1338 aaPredicted RBP12.74□□□□□ -0.37
CTNNA1-240ENST00000523912 FAM83GA6ND36 823 aa12.74□□□□□ -0.37
CTNNA1-240ENST00000523912 RGPD8O14715 1765 aaPredicted RBP12.74□□□□□ -0.37
CTNNA1-240ENST00000523912 BAG6P46379 1132 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms