RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 FAM135BQ49AJ0 1406 aa18.39■□□□□ 0.53
VEGFA-224ENST00000523873 PRAM1Q96QH2 718 aa18.38■□□□□ 0.53
VEGFA-224ENST00000523873 FMN2Q9NZ56 1722 aa18.37■□□□□ 0.53
VEGFA-224ENST00000523873 ROCK2O75116 1388 aaKnown RBP18.36■□□□□ 0.53
VEGFA-224ENST00000523873 ATF3P18847 181 aa18.36■□□□□ 0.53
VEGFA-224ENST00000523873 CDC42BPGQ6DT37 1551 aa18.36■□□□□ 0.53
VEGFA-224ENST00000523873 QRICH2Q9H0J4 1663 aa18.36■□□□□ 0.53
VEGFA-224ENST00000523873 RALGAPBQ86X10 1494 aa18.35■□□□□ 0.53
VEGFA-224ENST00000523873 DCCP43146 1447 aa18.35■□□□□ 0.53
VEGFA-224ENST00000523873 SIRT1Q96EB6 747 aa18.35■□□□□ 0.53
VEGFA-224ENST00000523873 POGKQ9P215 609 aa18.35■□□□□ 0.53
VEGFA-224ENST00000523873 MST1RQ04912 1400 aa18.34■□□□□ 0.53
VEGFA-224ENST00000523873 CADPS2Q86UW7 1296 aa18.33■□□□□ 0.52
VEGFA-224ENST00000523873 SLAIN2Q9P270 581 aa18.33■□□□□ 0.52
VEGFA-224ENST00000523873 ADGRB2O60241 1585 aa18.32■□□□□ 0.52
VEGFA-224ENST00000523873 MINK1Q8N4C8 1332 aaPredicted RBP18.31■□□□□ 0.52
VEGFA-224ENST00000523873 NUTM2FA1L443 756 aa18.31■□□□□ 0.52
VEGFA-224ENST00000523873 HIRIP3Q9BW71 556 aaPredicted RBP18.31■□□□□ 0.52
VEGFA-224ENST00000523873 PHLPP1O60346 1717 aa18.31■□□□□ 0.52
VEGFA-224ENST00000523873 USP32Q8NFA0 1604 aa18.3■□□□□ 0.52
VEGFA-224ENST00000523873 GPRASP1Q5JY77 1395 aa18.3■□□□□ 0.52
VEGFA-224ENST00000523873 C1orf167Q5SNV9 1468 aa18.28■□□□□ 0.52
VEGFA-224ENST00000523873 HSPA1LP34931 641 aa18.28■□□□□ 0.52
VEGFA-224ENST00000523873 CARD11Q9BXL7 1154 aa18.28■□□□□ 0.52
VEGFA-224ENST00000523873 TIMELESSQ9UNS1 1208 aa18.28■□□□□ 0.52
VEGFA-224ENST00000523873 NHSL1Q5SYE7 1610 aa18.27■□□□□ 0.51
VEGFA-224ENST00000523873 CENPJQ9HC77 1338 aaPredicted RBP18.25■□□□□ 0.51
VEGFA-224ENST00000523873 BRINP3Q76B58 766 aa18.25■□□□□ 0.51
VEGFA-224ENST00000523873 ORAI2Q96SN7 254 aa18.25■□□□□ 0.51
VEGFA-224ENST00000523873 DDX17Q92841 729 aaKnown RBP18.23■□□□□ 0.51
VEGFA-224ENST00000523873 COL16A1Q07092 1604 aaPredicted RBP18.23■□□□□ 0.51
VEGFA-224ENST00000523873 AHDC1Q5TGY3 1603 aaPredicted RBP18.23■□□□□ 0.51
VEGFA-224ENST00000523873 ITSN1Q15811 1721 aa18.22■□□□□ 0.51
VEGFA-224ENST00000523873 TULP4Q9NRJ4 1543 aa18.22■□□□□ 0.51
VEGFA-224ENST00000523873 EIF3AQ14152 1382 aaKnown RBP18.21■□□□□ 0.51
VEGFA-224ENST00000523873 WASLO00401 505 aaPredicted RBP18.21■□□□□ 0.51
VEGFA-224ENST00000523873 KIF1AQ12756 1690 aa18.21■□□□□ 0.51
VEGFA-224ENST00000523873 TOPAZ1Q8N9V7 1692 aa18.2■□□□□ 0.5
VEGFA-224ENST00000523873 ESCO1Q5FWF5 840 aa18.2■□□□□ 0.5
VEGFA-224ENST00000523873 PRR36Q9H6K5 1346 aa18.2■□□□□ 0.5
VEGFA-224ENST00000523873 CDK19Q9BWU1 502 aa18.18■□□□□ 0.5
VEGFA-224ENST00000523873 ANKARQ7Z5J8 1434 aa18.17■□□□□ 0.5
VEGFA-224ENST00000523873 ATP7BP35670 1465 aa18.17■□□□□ 0.5
VEGFA-224ENST00000523873 USP47Q96K76 1375 aa18.16■□□□□ 0.5
VEGFA-224ENST00000523873 ST20-MTHFSA0A0A6YYL1 179 aa18.14■□□□□ 0.49
VEGFA-224ENST00000523873 XPCQ01831 940 aaPredicted RBP18.14■□□□□ 0.49
VEGFA-224ENST00000523873 PMFBP1Q8TBY8 1022 aa18.14■□□□□ 0.49
VEGFA-224ENST00000523873 CABP2Q9NPB3 220 aa18.14■□□□□ 0.49
VEGFA-224ENST00000523873 SRPK2P78362 688 aaKnown RBP18.13■□□□□ 0.49
VEGFA-224ENST00000523873 NUDT16Q96DE0 195 aaKnown RBP18.13■□□□□ 0.49
VEGFA-224ENST00000523873 PHF8Q9UPP1 1060 aa18.13■□□□□ 0.49
VEGFA-224ENST00000523873 SHPRHQ149N8 1683 aa18.12■□□□□ 0.49
VEGFA-224ENST00000523873 FOXO3O43524 673 aa18.12■□□□□ 0.49
VEGFA-224ENST00000523873 PXDNQ92626 1479 aa18.11■□□□□ 0.49
VEGFA-224ENST00000523873 SBNO2Q9Y2G9 1366 aa18.1■□□□□ 0.49
VEGFA-224ENST00000523873 EVC2Q86UK5 1308 aa18.1■□□□□ 0.49
VEGFA-224ENST00000523873 TRPM3Q9HCF6 1732 aaPredicted RBP18.09■□□□□ 0.49
VEGFA-224ENST00000523873 SOS2Q07890 1332 aaPredicted RBP18.09■□□□□ 0.49
VEGFA-224ENST00000523873 TESK2Q96S53 571 aa18.09■□□□□ 0.49
VEGFA-224ENST00000523873 NPHP3Q7Z494 1330 aa18.08■□□□□ 0.49
VEGFA-224ENST00000523873 PPIP5K1Q6PFW1 1433 aa18.07■□□□□ 0.48
VEGFA-224ENST00000523873 AKAP12Q02952 1782 aa18.07■□□□□ 0.48
VEGFA-224ENST00000523873 KRT28Q7Z3Y7 464 aa18.06■□□□□ 0.48
VEGFA-224ENST00000523873 CCDC61Q9Y6R9 512 aa18.06■□□□□ 0.48
VEGFA-224ENST00000523873 JCADQ9P266 1359 aa18.05■□□□□ 0.48
VEGFA-224ENST00000523873 MED1Q15648 1581 aaPredicted RBP18.05■□□□□ 0.48
VEGFA-224ENST00000523873 DISP3Q9P2K9 1392 aa18.04■□□□□ 0.48
VEGFA-224ENST00000523873 HSPA5P11021 654 aaKnown RBP18.04■□□□□ 0.48
VEGFA-224ENST00000523873 NGDNQ8NEJ9 315 aaKnown RBP18.04■□□□□ 0.48
VEGFA-224ENST00000523873 PNPLA6Q8IY17 1366 aa18.04■□□□□ 0.48
VEGFA-224ENST00000523873 ALS2Q96Q42 1657 aa18.03■□□□□ 0.48
VEGFA-224ENST00000523873 COL22A1Q8NFW1 1626 aaPredicted RBP18.03■□□□□ 0.48
VEGFA-224ENST00000523873 PSME1Q06323 249 aa18.03■□□□□ 0.48
VEGFA-224ENST00000523873 LRRC59Q96AG4 307 aaKnown RBP18.03■□□□□ 0.48
VEGFA-224ENST00000523873 ACEP12821 1306 aa18.02■□□□□ 0.48
VEGFA-224ENST00000523873 CABP1Q9NZU7 370 aa18.02■□□□□ 0.48
VEGFA-224ENST00000523873 LRP6O75581 1613 aa18.01■□□□□ 0.47
VEGFA-224ENST00000523873 MON2Q7Z3U7 1717 aa18.01■□□□□ 0.47
VEGFA-224ENST00000523873 ABCA3Q99758 1704 aa18.01■□□□□ 0.47
VEGFA-224ENST00000523873 PLEKHG3A1L390 1219 aa18.01■□□□□ 0.47
VEGFA-224ENST00000523873 EIF4G2P78344 907 aaKnown RBP eCLIP18.01■□□□□ 0.47
VEGFA-224ENST00000523873 POLR3AO14802 1390 aaPredicted RBP18.01■□□□□ 0.47
VEGFA-224ENST00000523873 ATAD2Q6PL18 1390 aa18.01■□□□□ 0.47
VEGFA-224ENST00000523873 MYOM1P52179 1685 aa17.99■□□□□ 0.47
VEGFA-224ENST00000523873 SPATA31A3Q5VYP0 1347 aa17.99■□□□□ 0.47
VEGFA-224ENST00000523873 TNS3Q68CZ2 1445 aa17.99■□□□□ 0.47
VEGFA-224ENST00000523873 MARF1Q9Y4F3 1742 aaKnown RBP17.99■□□□□ 0.47
VEGFA-224ENST00000523873 NUTM2BA6NNL0 878 aaPredicted RBP17.99■□□□□ 0.47
VEGFA-224ENST00000523873 NUTM2EB1AL46 878 aaPredicted RBP17.99■□□□□ 0.47
VEGFA-224ENST00000523873 PLEKHG5O94827 1062 aa17.99■□□□□ 0.47
VEGFA-224ENST00000523873 NUTM2AQ8IVF1 878 aaPredicted RBP17.99■□□□□ 0.47
VEGFA-224ENST00000523873 TMF1P82094 1093 aa17.98■□□□□ 0.47
VEGFA-224ENST00000523873 LMOD2Q6P5Q4 547 aa17.98■□□□□ 0.47
VEGFA-224ENST00000523873 CRYBG1Q9Y4K1 1723 aa17.98■□□□□ 0.47
VEGFA-224ENST00000523873 NRKQ7Z2Y5 1582 aa17.97■□□□□ 0.47
VEGFA-224ENST00000523873 SBNO1A3KN83 1393 aa17.97■□□□□ 0.47
VEGFA-224ENST00000523873 TMC1Q8TDI8 760 aa17.97■□□□□ 0.47
VEGFA-224ENST00000523873 CD163L1Q9NR16 1453 aa17.96■□□□□ 0.47
VEGFA-224ENST00000523873 PAK3O75914 559 aaPredicted RBP17.96■□□□□ 0.47
VEGFA-224ENST00000523873 SPATA31A6Q5VVP1 1343 aa17.96■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms