RNA–Protein interactions for RNA: ENST00000523655.1

SREK1-213, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, human

TSL 5

Gene SREK1, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREK1-213	ENST00000523655	LCE2B	O14633	110 aa		10.54	□□□□□ -0.72
SREK1-213	ENST00000523655	USP46	P62068	366 aa		10.54	□□□□□ -0.72
SREK1-213	ENST00000523655	BEGAIN	Q9BUH8	593 aa		10.54	□□□□□ -0.72
SREK1-213	ENST00000523655	PDZRN3	Q9UPQ7	1066 aa		10.54	□□□□□ -0.72
SREK1-213	ENST00000523655	MOXD2P	A6NHM9	499 aa		10.53	□□□□□ -0.72
SREK1-213	ENST00000523655	PDE4D	Q08499	809 aa		10.52	□□□□□ -0.73
SREK1-213	ENST00000523655		Q3C1V9	767 aa		10.52	□□□□□ -0.73
SREK1-213	ENST00000523655	BCAN	Q96GW7	911 aa		10.52	□□□□□ -0.73
SREK1-213	ENST00000523655	USB1	Q9BQ65	265 aa	Known RBP	10.52	□□□□□ -0.73
SREK1-213	ENST00000523655	MSS51	Q4VC12	460 aa		10.51	□□□□□ -0.73
SREK1-213	ENST00000523655	ZNF697	Q5TEC3	545 aa		10.51	□□□□□ -0.73
SREK1-213	ENST00000523655	TNFRSF10A	O00220	468 aa		10.5	□□□□□ -0.73
SREK1-213	ENST00000523655	FDX1	P10109	184 aa		10.5	□□□□□ -0.73
SREK1-213	ENST00000523655	ZNF598	Q86UK7	904 aa	Known RBP	10.5	□□□□□ -0.73
SREK1-213	ENST00000523655	TBC1D2	Q9BYX2	928 aa		10.48	□□□□□ -0.73
SREK1-213	ENST00000523655	NRG2	O14511	850 aa	Predicted RBP	10.47	□□□□□ -0.73
SREK1-213	ENST00000523655	MMP16	P51512	607 aa		10.47	□□□□□ -0.73
SREK1-213	ENST00000523655	FOXC1	Q12948	553 aa		10.47	□□□□□ -0.73
SREK1-213	ENST00000523655	C6orf229	H3BNL8	230 aa		10.46	□□□□□ -0.73
SREK1-213	ENST00000523655	DXO	O77932	396 aa	Known RBP	10.46	□□□□□ -0.73
SREK1-213	ENST00000523655	CCDC24	Q8N4L8	307 aa		10.46	□□□□□ -0.73
SREK1-213	ENST00000523655	PCDHB15	Q9Y5E8	787 aa		10.46	□□□□□ -0.73
SREK1-213	ENST00000523655	GDF9	O60383	454 aa		10.45	□□□□□ -0.74
SREK1-213	ENST00000523655	LAPTM4A	Q15012	233 aa		10.44	□□□□□ -0.74
SREK1-213	ENST00000523655	PKD2L1	Q9P0L9	805 aa		10.44	□□□□□ -0.74
SREK1-213	ENST00000523655	RETREG3	Q86VR2	466 aa		10.42	□□□□□ -0.74
SREK1-213	ENST00000523655	JUND	P17535	347 aa		10.41	□□□□□ -0.74
SREK1-213	ENST00000523655	RPIA	P49247	311 aa		10.41	□□□□□ -0.74
SREK1-213	ENST00000523655	CSPP1	Q1MSJ5	1256 aa		10.41	□□□□□ -0.74
SREK1-213	ENST00000523655	TRAF7	Q6Q0C0	670 aa		10.41	□□□□□ -0.74
SREK1-213	ENST00000523655	GPBP1L1	Q9HC44	474 aa	Predicted RBP	10.41	□□□□□ -0.74
SREK1-213	ENST00000523655	PTCRA	Q6ISU1	281 aa	Predicted RBP	10.4	□□□□□ -0.74
SREK1-213	ENST00000523655	RSBN1L	Q6PCB5	846 aa	Predicted RBP	10.4	□□□□□ -0.74
SREK1-213	ENST00000523655	ZBTB24	O43167	697 aa	Predicted RBP	10.39	□□□□□ -0.75
SREK1-213	ENST00000523655	CD2BP2	O95400	341 aa	Known RBP	10.39	□□□□□ -0.75
SREK1-213	ENST00000523655	CABLES1	Q8TDN4	633 aa		10.39	□□□□□ -0.75
SREK1-213	ENST00000523655	PRR7	Q8TB68	274 aa		10.38	□□□□□ -0.75
SREK1-213	ENST00000523655	LIMD1	Q9UGP4	676 aa		10.38	□□□□□ -0.75
SREK1-213	ENST00000523655	PRR20E	P86478	221 aa		10.37	□□□□□ -0.75
SREK1-213	ENST00000523655	PRR20C	P86479	221 aa		10.37	□□□□□ -0.75
SREK1-213	ENST00000523655	PRR20D	P86480	221 aa		10.37	□□□□□ -0.75
SREK1-213	ENST00000523655	PRR20B	P86481	221 aa		10.37	□□□□□ -0.75
SREK1-213	ENST00000523655	PRR20A	P86496	221 aa		10.37	□□□□□ -0.75
SREK1-213	ENST00000523655	TRIM32	Q13049	653 aa		10.37	□□□□□ -0.75
SREK1-213	ENST00000523655	MYSM1	Q5VVJ2	828 aa		10.37	□□□□□ -0.75
SREK1-213	ENST00000523655	RIC3	Q7Z5B4	369 aa		10.37	□□□□□ -0.75
SREK1-213	ENST00000523655	FAM187A	A6NFU0	413 aa		10.36	□□□□□ -0.75
SREK1-213	ENST00000523655	SPTLC1	O15269	473 aa		10.36	□□□□□ -0.75
SREK1-213	ENST00000523655	MTMR2	Q13614	643 aa		10.36	□□□□□ -0.75
SREK1-213	ENST00000523655	NUDT12	Q9BQG2	462 aa		10.36	□□□□□ -0.75
SREK1-213	ENST00000523655	CFAP99	D6REC4	459 aa		10.35	□□□□□ -0.75
SREK1-213	ENST00000523655	HRC	P23327	699 aa		10.35	□□□□□ -0.75
SREK1-213	ENST00000523655	SKOR1	P84550	965 aa		10.35	□□□□□ -0.75
SREK1-213	ENST00000523655	QPCT	Q16769	361 aa		10.34	□□□□□ -0.75
SREK1-213	ENST00000523655	POLR3E	Q9NVU0	708 aa		10.34	□□□□□ -0.75
SREK1-213	ENST00000523655	PKDCC	Q504Y2	493 aa		10.33	□□□□□ -0.76
SREK1-213	ENST00000523655	MYT1	Q01538	1121 aa		10.32	□□□□□ -0.76
SREK1-213	ENST00000523655	FAM117A	Q9C073	453 aa		10.31	□□□□□ -0.76
SREK1-213	ENST00000523655	KDM4C	Q9H3R0	1056 aa		10.31	□□□□□ -0.76
SREK1-213	ENST00000523655	TOR4A	Q9NXH8	423 aa		10.31	□□□□□ -0.76
SREK1-213	ENST00000523655	ST8SIA5	O15466	376 aa		10.3	□□□□□ -0.76
SREK1-213	ENST00000523655	DIXDC1	Q155Q3	683 aa		10.3	□□□□□ -0.76
SREK1-213	ENST00000523655	MRGPRX2	Q96LB1	330 aa		10.3	□□□□□ -0.76
SREK1-213	ENST00000523655	DGAT1	O75907	488 aa		10.29	□□□□□ -0.76
SREK1-213	ENST00000523655	CCNYL3	P0C7X3	344 aa		10.29	□□□□□ -0.76
SREK1-213	ENST00000523655	RTL5	Q5HYW3	569 aa	Predicted RBP	10.29	□□□□□ -0.76
SREK1-213	ENST00000523655	CYP4X1	Q8N118	509 aa		10.29	□□□□□ -0.76
SREK1-213	ENST00000523655	TSC1	Q92574	1164 aa		10.29	□□□□□ -0.76
SREK1-213	ENST00000523655	ZBTB3	Q9H5J0	574 aa		10.29	□□□□□ -0.76
SREK1-213	ENST00000523655	WNT7A	O00755	349 aa		10.28	□□□□□ -0.76
SREK1-213	ENST00000523655	PER1	O15534	1290 aa	Predicted RBP	10.28	□□□□□ -0.76
SREK1-213	ENST00000523655	GJA5	P36382	358 aa		10.28	□□□□□ -0.76
SREK1-213	ENST00000523655	LINC01559	Q495D7	138 aa		10.28	□□□□□ -0.76
SREK1-213	ENST00000523655	RC3H1	Q5TC82	1133 aa	Known RBP	10.28	□□□□□ -0.76
SREK1-213	ENST00000523655	FBXO31	Q5XUX0	539 aa	Predicted RBP	10.28	□□□□□ -0.76
SREK1-213	ENST00000523655	TTC24	A2A3L6	582 aa	Predicted RBP	10.27	□□□□□ -0.77
SREK1-213	ENST00000523655		J3QL48	77 aa		10.27	□□□□□ -0.77
SREK1-213	ENST00000523655	PTPRN	Q16849	979 aa		10.27	□□□□□ -0.77
SREK1-213	ENST00000523655	EVA1B	Q9NVM1	165 aa		10.27	□□□□□ -0.77
SREK1-213	ENST00000523655	SPDYE5	A6NIY4	337 aa		10.26	□□□□□ -0.77
SREK1-213	ENST00000523655	NUTM2B	A6NNL0	878 aa	Predicted RBP	10.26	□□□□□ -0.77
SREK1-213	ENST00000523655	NUTM2E	B1AL46	878 aa	Predicted RBP	10.26	□□□□□ -0.77
SREK1-213	ENST00000523655	POTEC	B2RU33	542 aa		10.26	□□□□□ -0.77
SREK1-213	ENST00000523655	NUTM2D	Q5VT03	806 aa	Predicted RBP	10.26	□□□□□ -0.77
SREK1-213	ENST00000523655	NUTM2A	Q8IVF1	878 aa	Predicted RBP	10.26	□□□□□ -0.77
SREK1-213	ENST00000523655	BAP1	Q92560	729 aa		10.26	□□□□□ -0.77
SREK1-213	ENST00000523655	UNC93B1	Q9H1C4	597 aa		10.26	□□□□□ -0.77
SREK1-213	ENST00000523655	DACH1	Q9UI36	760 aa		10.26	□□□□□ -0.77
SREK1-213	ENST00000523655	PLEKHG3	A1L390	1219 aa		10.25	□□□□□ -0.77
SREK1-213	ENST00000523655	LILRB3	O75022	631 aa		10.25	□□□□□ -0.77
SREK1-213	ENST00000523655	CLK2	P49760	499 aa	Known RBP	10.25	□□□□□ -0.77
SREK1-213	ENST00000523655	SH3BP2	P78314	561 aa		10.25	□□□□□ -0.77
SREK1-213	ENST00000523655	KCNH2	Q12809	1159 aa		10.25	□□□□□ -0.77
SREK1-213	ENST00000523655	LYPD8	Q6UX82	237 aa		10.25	□□□□□ -0.77
SREK1-213	ENST00000523655	PROCA1	Q8NCQ7	364 aa	Predicted RBP	10.25	□□□□□ -0.77
SREK1-213	ENST00000523655	MAP10	Q9P2G4	905 aa		10.25	□□□□□ -0.77
SREK1-213	ENST00000523655	SMPD1	P17405	629 aa		10.24	□□□□□ -0.77
SREK1-213	ENST00000523655	CTH	P32929	405 aa		10.24	□□□□□ -0.77
SREK1-213	ENST00000523655	PRPF38B	Q5VTL8	546 aa	Known RBP	10.23	□□□□□ -0.77
SREK1-213	ENST00000523655	DESI1	Q6ICB0	168 aa		10.23	□□□□□ -0.77

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