RNA–Protein interactions for RNA: ENST00000523573.5

TVP23C-207, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 5

Gene TVP23C, Length 764 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-207ENST00000523573 GRIPAP1Q4V328 841 aa12.07□□□□□ -0.48
TVP23C-207ENST00000523573 WNT7AO00755 349 aa12.06□□□□□ -0.48
TVP23C-207ENST00000523573 RNF19BQ6ZMZ0 732 aa12.06□□□□□ -0.48
TVP23C-207ENST00000523573 PHOX2BQ99453 314 aa12.06□□□□□ -0.48
TVP23C-207ENST00000523573 SNIP1Q8TAD8 396 aaKnown RBP12.05□□□□□ -0.48
TVP23C-207ENST00000523573 Q3C1V9 767 aa12.04□□□□□ -0.48
TVP23C-207ENST00000523573 SMPD1P17405 629 aa12.03□□□□□ -0.48
TVP23C-207ENST00000523573 TRIM32Q13049 653 aa12.03□□□□□ -0.48
TVP23C-207ENST00000523573 NFX1Q12986 1120 aaKnown RBP12.02□□□□□ -0.49
TVP23C-207ENST00000523573 MMP16P51512 607 aa12□□□□□ -0.49
TVP23C-207ENST00000523573 MRGPRX2Q96LB1 330 aa12□□□□□ -0.49
TVP23C-207ENST00000523573 ATP13A2Q9NQ11 1180 aa12□□□□□ -0.49
TVP23C-207ENST00000523573 STK17AQ9UEE5 414 aa11.99□□□□□ -0.49
TVP23C-207ENST00000523573 WIPF1O43516 503 aa11.98□□□□□ -0.49
TVP23C-207ENST00000523573 J3QL48 77 aa11.96□□□□□ -0.49
TVP23C-207ENST00000523573 SNRPBP14678 240 aaKnown RBP11.96□□□□□ -0.49
TVP23C-207ENST00000523573 INSM1Q01101 510 aaPredicted RBP11.96□□□□□ -0.49
TVP23C-207ENST00000523573 USB1Q9BQ65 265 aaKnown RBP11.96□□□□□ -0.49
TVP23C-207ENST00000523573 REPIN1Q9BWE0 567 aaKnown RBP11.96□□□□□ -0.49
TVP23C-207ENST00000523573 SENP2Q9HC62 589 aa11.96□□□□□ -0.49
TVP23C-207ENST00000523573 GPIHBP1Q8IV16 184 aa11.95□□□□□ -0.5
TVP23C-207ENST00000523573 TRIM47Q96LD4 638 aa11.95□□□□□ -0.5
TVP23C-207ENST00000523573 DXOO77932 396 aaKnown RBP11.94□□□□□ -0.5
TVP23C-207ENST00000523573 CD46P15529 392 aa11.93□□□□□ -0.5
TVP23C-207ENST00000523573 TERTO14746 1132 aaKnown RBP11.92□□□□□ -0.5
TVP23C-207ENST00000523573 KDM4AO75164 1064 aa11.92□□□□□ -0.5
TVP23C-207ENST00000523573 HPS1Q92902 700 aa11.92□□□□□ -0.5
TVP23C-207ENST00000523573 CCDC24Q8N4L8 307 aa11.9□□□□□ -0.5
TVP23C-207ENST00000523573 KIFC2Q96AC6 838 aa11.9□□□□□ -0.5
TVP23C-207ENST00000523573 WNT7BP56706 349 aa11.89□□□□□ -0.51
TVP23C-207ENST00000523573 RC3H1Q5TC82 1133 aaKnown RBP11.89□□□□□ -0.51
TVP23C-207ENST00000523573 USP46P62068 366 aa11.88□□□□□ -0.51
TVP23C-207ENST00000523573 LCE2CQ5TA81 110 aa11.87□□□□□ -0.51
TVP23C-207ENST00000523573 SKOR1P84550 965 aa11.86□□□□□ -0.51
TVP23C-207ENST00000523573 MAP2K5Q13163 448 aa11.84□□□□□ -0.51
TVP23C-207ENST00000523573 HLA-CQ95604 372 aa11.84□□□□□ -0.51
TVP23C-207ENST00000523573 ALDH1A1P00352 501 aa11.83□□□□□ -0.52
TVP23C-207ENST00000523573 HOXA2O43364 376 aa11.82□□□□□ -0.52
TVP23C-207ENST00000523573 MDM2Q00987 491 aaPredicted RBP11.81□□□□□ -0.52
TVP23C-207ENST00000523573 JUNDP17535 347 aa11.8□□□□□ -0.52
TVP23C-207ENST00000523573 IRF6O14896 467 aa11.79□□□□□ -0.52
TVP23C-207ENST00000523573 SLC16A10Q8TF71 515 aa11.79□□□□□ -0.52
TVP23C-207ENST00000523573 PLCB2Q00722 1185 aa11.76□□□□□ -0.53
TVP23C-207ENST00000523573 GUCA2AQ02747 115 aa11.76□□□□□ -0.53
TVP23C-207ENST00000523573 EHBP1Q8NDI1 1231 aa11.76□□□□□ -0.53
TVP23C-207ENST00000523573 SYMPKQ92797 1274 aaKnown RBP11.75□□□□□ -0.53
TVP23C-207ENST00000523573 NUDT12Q9BQG2 462 aa11.75□□□□□ -0.53
TVP23C-207ENST00000523573 NXF1Q9UBU9 619 aaKnown RBP11.75□□□□□ -0.53
TVP23C-207ENST00000523573 SIAH2O43255 324 aa11.74□□□□□ -0.53
TVP23C-207ENST00000523573 WASF2Q9Y6W5 498 aa11.74□□□□□ -0.53
TVP23C-207ENST00000523573 MINK1Q8N4C8 1332 aaPredicted RBP11.74□□□□□ -0.53
TVP23C-207ENST00000523573 FAM181BA6NEQ2 426 aa11.73□□□□□ -0.53
TVP23C-207ENST00000523573 PTCRAQ6ISU1 281 aaPredicted RBP11.73□□□□□ -0.53
TVP23C-207ENST00000523573 RETREG3Q86VR2 466 aa11.73□□□□□ -0.53
TVP23C-207ENST00000523573 CAPN5O15484 640 aaPredicted RBP11.72□□□□□ -0.53
TVP23C-207ENST00000523573 BMP1P13497 986 aa11.72□□□□□ -0.53
TVP23C-207ENST00000523573 TRIM46Q7Z4K8 759 aa11.71□□□□□ -0.53
TVP23C-207ENST00000523573 NUTM1Q86Y26 1132 aa11.71□□□□□ -0.53
TVP23C-207ENST00000523573 NPAS3Q8IXF0 933 aa11.71□□□□□ -0.53
TVP23C-207ENST00000523573 GPCPD1Q9NPB8 672 aa11.71□□□□□ -0.53
TVP23C-207ENST00000523573 TULP1O00294 542 aaPredicted RBP11.7□□□□□ -0.54
TVP23C-207ENST00000523573 CLCN1P35523 988 aa11.7□□□□□ -0.54
TVP23C-207ENST00000523573 IRF7Q92985 503 aa11.7□□□□□ -0.54
TVP23C-207ENST00000523573 GMPRP36959 345 aa11.69□□□□□ -0.54
TVP23C-207ENST00000523573 CCDC102AQ96A19 550 aa11.69□□□□□ -0.54
TVP23C-207ENST00000523573 FAM217BQ9NTX9 383 aaPredicted RBP11.69□□□□□ -0.54
TVP23C-207ENST00000523573 MS4A1P11836 297 aa11.67□□□□□ -0.54
TVP23C-207ENST00000523573 SH3BP2P78314 561 aa11.67□□□□□ -0.54
TVP23C-207ENST00000523573 CCNYL3P0C7X3 344 aa11.66□□□□□ -0.54
TVP23C-207ENST00000523573 ZSCAN1Q8NBB4 408 aa11.66□□□□□ -0.54
TVP23C-207ENST00000523573 C6orf229H3BNL8 230 aa11.65□□□□□ -0.54
TVP23C-207ENST00000523573 FDX1P10109 184 aa11.65□□□□□ -0.54
TVP23C-207ENST00000523573 KRI1Q8N9T8 703 aaKnown RBP11.65□□□□□ -0.54
TVP23C-207ENST00000523573 H3BM21 787 aa11.64□□□□□ -0.55
TVP23C-207ENST00000523573 PCDHGC3Q9UN70 934 aa11.64□□□□□ -0.55
TVP23C-207ENST00000523573 VEGFBP49765 207 aa11.63□□□□□ -0.55
TVP23C-207ENST00000523573 PTPRNQ16849 979 aa11.62□□□□□ -0.55
TVP23C-207ENST00000523573 UNC93B1Q9H1C4 597 aa11.62□□□□□ -0.55
TVP23C-207ENST00000523573 LORP23490 312 aaPredicted RBP11.61□□□□□ -0.55
TVP23C-207ENST00000523573 ZFP42Q96MM3 310 aa11.61□□□□□ -0.55
TVP23C-207ENST00000523573 EVA1BQ9NVM1 165 aa11.6□□□□□ -0.55
TVP23C-207ENST00000523573 TLL2Q9Y6L7 1015 aa11.6□□□□□ -0.55
TVP23C-207ENST00000523573 PLEKHG3A1L390 1219 aa11.59□□□□□ -0.55
TVP23C-207ENST00000523573 LINC01559Q495D7 138 aa11.59□□□□□ -0.55
TVP23C-207ENST00000523573 BAP1Q92560 729 aa11.59□□□□□ -0.55
TVP23C-207ENST00000523573 ERBB4Q15303 1308 aa11.59□□□□□ -0.55
TVP23C-207ENST00000523573 VARSP26640 1264 aaKnown RBP11.57□□□□□ -0.56
TVP23C-207ENST00000523573 HAP1P54257 671 aaPredicted RBP11.57□□□□□ -0.56
TVP23C-207ENST00000523573 KCNH2Q12809 1159 aa11.57□□□□□ -0.56
TVP23C-207ENST00000523573 ZNF511Q8NB15 262 aa11.57□□□□□ -0.56
TVP23C-207ENST00000523573 KDM2AQ9Y2K7 1162 aa11.57□□□□□ -0.56
TVP23C-207ENST00000523573 NNTQ13423 1086 aa11.56□□□□□ -0.56
TVP23C-207ENST00000523573 MPNDQ8N594 471 aa11.56□□□□□ -0.56
TVP23C-207ENST00000523573 SCARF1Q14162 830 aa11.55□□□□□ -0.56
TVP23C-207ENST00000523573 MRPL14Q6P1L8 145 aaKnown RBP11.55□□□□□ -0.56
TVP23C-207ENST00000523573 SPIRE2Q8WWL2 714 aa11.55□□□□□ -0.56
TVP23C-207ENST00000523573 PRR7Q8TB68 274 aa11.54□□□□□ -0.56
TVP23C-207ENST00000523573 SSTR3P32745 418 aaPredicted RBP11.53□□□□□ -0.56
TVP23C-207ENST00000523573 NDUFV2P19404 249 aa11.52□□□□□ -0.57
TVP23C-207ENST00000523573 DESI1Q6ICB0 168 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms