RNA–Protein interactions for RNA: ENST00000523456.1

PDGFRB-211, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 2

Gene PDGFRB, Length 1,023 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-211ENST00000523456 SOS2Q07890 1332 aaPredicted RBP16.55■□□□□ 0.24
PDGFRB-211ENST00000523456 ADGRF5Q8IZF2 1346 aa16.55■□□□□ 0.24
PDGFRB-211ENST00000523456 KNDC1Q76NI1 1749 aa16.55■□□□□ 0.24
PDGFRB-211ENST00000523456 CDK12Q9NYV4 1490 aaPredicted RBP16.54■□□□□ 0.24
PDGFRB-211ENST00000523456 NRXN1Q9ULB1 1477 aa16.54■□□□□ 0.24
PDGFRB-211ENST00000523456 SIRT1Q96EB6 747 aa16.53■□□□□ 0.24
PDGFRB-211ENST00000523456 MYOM2P54296 1465 aa16.53■□□□□ 0.24
PDGFRB-211ENST00000523456 RGL3Q3MIN7 710 aa16.5■□□□□ 0.23
PDGFRB-211ENST00000523456 COL22A1Q8NFW1 1626 aaPredicted RBP16.49■□□□□ 0.23
PDGFRB-211ENST00000523456 NPHP3Q7Z494 1330 aa16.48■□□□□ 0.23
PDGFRB-211ENST00000523456 CLSPNQ9HAW4 1339 aa16.48■□□□□ 0.23
PDGFRB-211ENST00000523456 YTHDC2Q9H6S0 1430 aaKnown RBP16.48■□□□□ 0.23
PDGFRB-211ENST00000523456 ORAI2Q96SN7 254 aa16.48■□□□□ 0.23
PDGFRB-211ENST00000523456 C14orf93Q9H972 538 aaKnown RBP16.48■□□□□ 0.23
PDGFRB-211ENST00000523456 RAB3GAP2Q9H2M9 1393 aa16.48■□□□□ 0.23
PDGFRB-211ENST00000523456 RXRBP28702 533 aa16.47■□□□□ 0.23
PDGFRB-211ENST00000523456 DDX17Q92841 729 aaKnown RBP16.47■□□□□ 0.23
PDGFRB-211ENST00000523456 AFF2P51816 1311 aa16.46■□□□□ 0.23
PDGFRB-211ENST00000523456 NUTM2BA6NNL0 878 aaPredicted RBP16.46■□□□□ 0.23
PDGFRB-211ENST00000523456 NUTM2EB1AL46 878 aaPredicted RBP16.46■□□□□ 0.23
PDGFRB-211ENST00000523456 NUTM2AQ8IVF1 878 aaPredicted RBP16.46■□□□□ 0.23
PDGFRB-211ENST00000523456 STAC3Q96MF2 364 aa16.45■□□□□ 0.22
PDGFRB-211ENST00000523456 PXDNQ92626 1479 aa16.45■□□□□ 0.22
PDGFRB-211ENST00000523456 DHX57Q6P158 1386 aaKnown RBP16.44■□□□□ 0.22
PDGFRB-211ENST00000523456 FMN2Q9NZ56 1722 aa16.44■□□□□ 0.22
PDGFRB-211ENST00000523456 DLC1Q96QB1 1528 aa16.44■□□□□ 0.22
PDGFRB-211ENST00000523456 KIF1AQ12756 1690 aa16.43■□□□□ 0.22
PDGFRB-211ENST00000523456 ESCO1Q5FWF5 840 aa16.42■□□□□ 0.22
PDGFRB-211ENST00000523456 TMEM132EQ6IEE7 984 aa16.42■□□□□ 0.22
PDGFRB-211ENST00000523456 WAPLQ7Z5K2 1190 aa16.42■□□□□ 0.22
PDGFRB-211ENST00000523456 STK26Q9P289 416 aa16.42■□□□□ 0.22
PDGFRB-211ENST00000523456 PLEKHH1Q9ULM0 1364 aa16.41■□□□□ 0.22
PDGFRB-211ENST00000523456 RBM6P78332 1123 aaKnown RBP16.41■□□□□ 0.22
PDGFRB-211ENST00000523456 FNBP4Q8N3X1 1017 aaPredicted RBP16.41■□□□□ 0.22
PDGFRB-211ENST00000523456 C8orf37Q96NL8 207 aa16.41■□□□□ 0.22
PDGFRB-211ENST00000523456 ADGRB1O14514 1584 aa16.38■□□□□ 0.21
PDGFRB-211ENST00000523456 ADGRB2O60241 1585 aa16.38■□□□□ 0.21
PDGFRB-211ENST00000523456 FOXO3O43524 673 aa16.38■□□□□ 0.21
PDGFRB-211ENST00000523456 CFAP70Q5T0N1 1121 aa16.38■□□□□ 0.21
PDGFRB-211ENST00000523456 NGLY1Q96IV0 654 aa16.38■□□□□ 0.21
PDGFRB-211ENST00000523456 QTRT2Q9H974 415 aaKnown RBP16.38■□□□□ 0.21
PDGFRB-211ENST00000523456 RGS12O14924 1447 aa16.36■□□□□ 0.21
PDGFRB-211ENST00000523456 ANKARQ7Z5J8 1434 aa16.36■□□□□ 0.21
PDGFRB-211ENST00000523456 ADAMTS2O95450 1211 aa16.36■□□□□ 0.21
PDGFRB-211ENST00000523456 TRPC5Q9UL62 973 aaPredicted RBP16.36■□□□□ 0.21
PDGFRB-211ENST00000523456 MARF1Q9Y4F3 1742 aaKnown RBP16.36■□□□□ 0.21
PDGFRB-211ENST00000523456 USP21Q9UK80 565 aa16.35■□□□□ 0.21
PDGFRB-211ENST00000523456 SPATA31A3Q5VYP0 1347 aa16.35■□□□□ 0.21
PDGFRB-211ENST00000523456 ATRNO75882 1429 aa16.35■□□□□ 0.21
PDGFRB-211ENST00000523456 EIF3AQ14152 1382 aaKnown RBP16.34■□□□□ 0.21
PDGFRB-211ENST00000523456 PRAM1Q96QH2 718 aa16.33■□□□□ 0.2
PDGFRB-211ENST00000523456 SBNO1A3KN83 1393 aa16.33■□□□□ 0.2
PDGFRB-211ENST00000523456 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.32■□□□□ 0.2
PDGFRB-211ENST00000523456 PHF8Q9UPP1 1060 aa16.32■□□□□ 0.2
PDGFRB-211ENST00000523456 BCL9LQ86UU0 1499 aa16.31■□□□□ 0.2
PDGFRB-211ENST00000523456 TNS3Q68CZ2 1445 aa16.31■□□□□ 0.2
PDGFRB-211ENST00000523456 PSME1Q06323 249 aa16.31■□□□□ 0.2
PDGFRB-211ENST00000523456 NUTM2FA1L443 756 aa16.3■□□□□ 0.2
PDGFRB-211ENST00000523456 KRT28Q7Z3Y7 464 aa16.3■□□□□ 0.2
PDGFRB-211ENST00000523456 SLIT2O94813 1529 aa16.29■□□□□ 0.2
PDGFRB-211ENST00000523456 ARHGEF10O15013 1369 aa16.29■□□□□ 0.2
PDGFRB-211ENST00000523456 POGKQ9P215 609 aa16.29■□□□□ 0.2
PDGFRB-211ENST00000523456 USP32Q8NFA0 1604 aa16.29■□□□□ 0.2
PDGFRB-211ENST00000523456 ATAD2Q6PL18 1390 aa16.28■□□□□ 0.2
PDGFRB-211ENST00000523456 XPCQ01831 940 aaPredicted RBP16.28■□□□□ 0.2
PDGFRB-211ENST00000523456 DCAF11Q8TEB1 546 aa16.28■□□□□ 0.2
PDGFRB-211ENST00000523456 RGPD8O14715 1765 aaPredicted RBP16.28■□□□□ 0.2
PDGFRB-211ENST00000523456 TULP4Q9NRJ4 1543 aa16.27■□□□□ 0.2
PDGFRB-211ENST00000523456 KIAA1210Q9ULL0 1709 aa16.25■□□□□ 0.19
PDGFRB-211ENST00000523456 UNC5CLQ8IV45 518 aa16.24■□□□□ 0.19
PDGFRB-211ENST00000523456 GJD4Q96KN9 370 aaPredicted RBP16.24■□□□□ 0.19
PDGFRB-211ENST00000523456 TRAK1Q9UPV9 953 aa16.24■□□□□ 0.19
PDGFRB-211ENST00000523456 TRPM3Q9HCF6 1732 aaPredicted RBP16.23■□□□□ 0.19
PDGFRB-211ENST00000523456 NWD2Q9ULI1 1742 aa16.23■□□□□ 0.19
PDGFRB-211ENST00000523456 WASLO00401 505 aaPredicted RBP16.23■□□□□ 0.19
PDGFRB-211ENST00000523456 SAFB2Q14151 953 aaKnown RBP eCLIP16.23■□□□□ 0.19
PDGFRB-211ENST00000523456 ARHGEF28Q8N1W1 1705 aaKnown RBP16.22■□□□□ 0.19
PDGFRB-211ENST00000523456 ABCA3Q99758 1704 aa16.22■□□□□ 0.19
PDGFRB-211ENST00000523456 KDM2AQ9Y2K7 1162 aa16.22■□□□□ 0.19
PDGFRB-211ENST00000523456 GPRASP1Q5JY77 1395 aa16.22■□□□□ 0.19
PDGFRB-211ENST00000523456 CCDC125Q86Z20 511 aa16.21■□□□□ 0.19
PDGFRB-211ENST00000523456 EP400Q96L91 3159 aa16.21■□□□□ 0.19
PDGFRB-211ENST00000523456 ALS2Q96Q42 1657 aa16.21■□□□□ 0.18
PDGFRB-211ENST00000523456 PRR36Q9H6K5 1346 aa16.2■□□□□ 0.18
PDGFRB-211ENST00000523456 RALGAPBQ86X10 1494 aa16.2■□□□□ 0.18
PDGFRB-211ENST00000523456 GLI3P10071 1580 aa16.2■□□□□ 0.18
PDGFRB-211ENST00000523456 MINK1Q8N4C8 1332 aaPredicted RBP16.19■□□□□ 0.18
PDGFRB-211ENST00000523456 ITSN1Q15811 1721 aa16.19■□□□□ 0.18
PDGFRB-211ENST00000523456 ATP7BP35670 1465 aa16.19■□□□□ 0.18
PDGFRB-211ENST00000523456 VPS72Q15906 364 aa16.19■□□□□ 0.18
PDGFRB-211ENST00000523456 PMFBP1Q8TBY8 1022 aa16.18■□□□□ 0.18
PDGFRB-211ENST00000523456 PLCH1Q4KWH8 1693 aa16.18■□□□□ 0.18
PDGFRB-211ENST00000523456 ONECUT3O60422 494 aaPredicted RBP16.17■□□□□ 0.18
PDGFRB-211ENST00000523456 HAP1P54257 671 aaPredicted RBP16.17■□□□□ 0.18
PDGFRB-211ENST00000523456 HIRIP3Q9BW71 556 aaPredicted RBP16.17■□□□□ 0.18
PDGFRB-211ENST00000523456 ZRANB1Q9UGI0 708 aa16.15■□□□□ 0.18
PDGFRB-211ENST00000523456 POLR3AO14802 1390 aaPredicted RBP16.14■□□□□ 0.17
PDGFRB-211ENST00000523456 CRYBG1Q9Y4K1 1723 aa16.14■□□□□ 0.17
PDGFRB-211ENST00000523456 COL14A1Q05707 1796 aaKnown RBP16.14■□□□□ 0.17
PDGFRB-211ENST00000523456 CABLES1Q8TDN4 633 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms