RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 NUP160Q12769 1436 aa16.3■□□□□ 0.2
PCDHGB1-201ENST00000523390 TTC5Q8N0Z6 440 aa16.29■□□□□ 0.2
PCDHGB1-201ENST00000523390 RAPGEF4Q8WZA2 1011 aa16.29■□□□□ 0.2
PCDHGB1-201ENST00000523390 POGZQ7Z3K3 1410 aa16.29■□□□□ 0.2
PCDHGB1-201ENST00000523390 SULT6B1Q6IMI4 303 aa16.29■□□□□ 0.2
PCDHGB1-201ENST00000523390 NOS1P29475 1434 aa16.29■□□□□ 0.2
PCDHGB1-201ENST00000523390 GPRASP1Q5JY77 1395 aa16.29■□□□□ 0.2
PCDHGB1-201ENST00000523390 RRS1Q15050 365 aaKnown RBP16.29■□□□□ 0.2
PCDHGB1-201ENST00000523390 ZNF692Q9BU19 519 aaPredicted RBP16.29■□□□□ 0.2
PCDHGB1-201ENST00000523390 CFAP43Q8NDM7 1665 aa16.29■□□□□ 0.2
PCDHGB1-201ENST00000523390 ZRSR1Q15695 479 aaKnown RBP16.28■□□□□ 0.2
PCDHGB1-201ENST00000523390 ANKLE2Q86XL3 938 aa16.28■□□□□ 0.2
PCDHGB1-201ENST00000523390 CCDC61Q9Y6R9 512 aa16.28■□□□□ 0.2
PCDHGB1-201ENST00000523390 ABCA5Q8WWZ7 1642 aa16.28■□□□□ 0.2
PCDHGB1-201ENST00000523390 SLC4A3P48751 1232 aa16.28■□□□□ 0.2
PCDHGB1-201ENST00000523390 BCAR3O75815 825 aa16.28■□□□□ 0.2
PCDHGB1-201ENST00000523390 NUDT16Q96DE0 195 aaKnown RBP16.28■□□□□ 0.2
PCDHGB1-201ENST00000523390 KDM5BQ9UGL1 1544 aa16.28■□□□□ 0.2
PCDHGB1-201ENST00000523390 TCOF1Q13428 1488 aaKnown RBP16.27■□□□□ 0.19
PCDHGB1-201ENST00000523390 GPATCH3Q96I76 525 aa16.27■□□□□ 0.19
PCDHGB1-201ENST00000523390 FOXD4L1Q9NU39 408 aa16.27■□□□□ 0.19
PCDHGB1-201ENST00000523390 PLCB2Q00722 1185 aa16.26■□□□□ 0.19
PCDHGB1-201ENST00000523390 NOL8Q76FK4 1167 aaKnown RBP16.26■□□□□ 0.19
PCDHGB1-201ENST00000523390 PTMAP06454 111 aaKnown RBP16.26■□□□□ 0.19
PCDHGB1-201ENST00000523390 ITSN2Q9NZM3 1697 aa16.26■□□□□ 0.19
PCDHGB1-201ENST00000523390 C9orf78Q9NZ63 289 aaPredicted RBP16.26■□□□□ 0.19
PCDHGB1-201ENST00000523390 RILPL2Q969X0 211 aa16.25■□□□□ 0.19
PCDHGB1-201ENST00000523390 LNPKQ9C0E8 428 aa16.25■□□□□ 0.19
PCDHGB1-201ENST00000523390 FAM135AQ9P2D6 1515 aa16.25■□□□□ 0.19
PCDHGB1-201ENST00000523390 WDR7Q9Y4E6 1490 aa16.24■□□□□ 0.19
PCDHGB1-201ENST00000523390 DISP3Q9P2K9 1392 aa16.24■□□□□ 0.19
PCDHGB1-201ENST00000523390 NEXNQ0ZGT2 675 aa16.24■□□□□ 0.19
PCDHGB1-201ENST00000523390 SYTL4Q96C24 671 aaPredicted RBP16.24■□□□□ 0.19
PCDHGB1-201ENST00000523390 PBRM1Q86U86 1689 aa16.23■□□□□ 0.19
PCDHGB1-201ENST00000523390 GOLGA6L4A6NEF3 574 aa16.23■□□□□ 0.19
PCDHGB1-201ENST00000523390 XPCQ01831 940 aaPredicted RBP16.23■□□□□ 0.19
PCDHGB1-201ENST00000523390 C14orf93Q9H972 538 aaKnown RBP16.23■□□□□ 0.19
PCDHGB1-201ENST00000523390 GZF1Q9H116 711 aaPredicted RBP16.22■□□□□ 0.19
PCDHGB1-201ENST00000523390 SCAF11Q99590 1463 aaKnown RBP16.21■□□□□ 0.19
PCDHGB1-201ENST00000523390 GTF2E1P29083 439 aaPredicted RBP16.21■□□□□ 0.19
PCDHGB1-201ENST00000523390 TWISTNBQ3B726 338 aaPredicted RBP16.21■□□□□ 0.19
PCDHGB1-201ENST00000523390 GAS2L2Q8NHY3 880 aa16.21■□□□□ 0.19
PCDHGB1-201ENST00000523390 USP35Q9P2H5 1018 aa16.21■□□□□ 0.19
PCDHGB1-201ENST00000523390 RBM33Q96EV2 1170 aaKnown RBP16.21■□□□□ 0.19
PCDHGB1-201ENST00000523390 DUOX2Q9NRD8 1548 aa16.21■□□□□ 0.18
PCDHGB1-201ENST00000523390 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.2■□□□□ 0.18
PCDHGB1-201ENST00000523390 A2MP01023 1474 aa16.2■□□□□ 0.18
PCDHGB1-201ENST00000523390 AIMP1Q12904 312 aaKnown RBP16.2■□□□□ 0.18
PCDHGB1-201ENST00000523390 NME9Q86XW9 330 aa16.19■□□□□ 0.18
PCDHGB1-201ENST00000523390 SMG6Q86US8 1419 aaKnown RBP16.19■□□□□ 0.18
PCDHGB1-201ENST00000523390 GBP4Q96PP9 640 aa16.18■□□□□ 0.18
PCDHGB1-201ENST00000523390 WWC1Q8IX03 1113 aa16.18■□□□□ 0.18
PCDHGB1-201ENST00000523390 DDX58O95786 925 aaKnown RBP16.18■□□□□ 0.18
PCDHGB1-201ENST00000523390 WDR63Q8IWG1 891 aa16.18■□□□□ 0.18
PCDHGB1-201ENST00000523390 THUMPD2Q9BTF0 503 aaKnown RBP16.17■□□□□ 0.18
PCDHGB1-201ENST00000523390 AMOTL2Q9Y2J4 779 aa16.17■□□□□ 0.18
PCDHGB1-201ENST00000523390 PDE3AQ14432 1141 aa16.16■□□□□ 0.18
PCDHGB1-201ENST00000523390 TARBP1Q13395 1621 aaKnown RBP16.16■□□□□ 0.18
PCDHGB1-201ENST00000523390 TMPOP42166 694 aaKnown RBP16.16■□□□□ 0.18
PCDHGB1-201ENST00000523390 C1orf115Q9H7X2 142 aa16.16■□□□□ 0.18
PCDHGB1-201ENST00000523390 NOB1Q9ULX3 412 aaKnown RBP16.16■□□□□ 0.18
PCDHGB1-201ENST00000523390 ZNF518AQ6AHZ1 1483 aa16.16■□□□□ 0.18
PCDHGB1-201ENST00000523390 ABCC2Q92887 1545 aa16.15■□□□□ 0.18
PCDHGB1-201ENST00000523390 SAMD9Q5K651 1589 aa16.15■□□□□ 0.18
PCDHGB1-201ENST00000523390 WASLO00401 505 aaPredicted RBP16.15■□□□□ 0.18
PCDHGB1-201ENST00000523390 PLEKHO1Q53GL0 409 aaPredicted RBP16.15■□□□□ 0.18
PCDHGB1-201ENST00000523390 FCHSD2O94868 740 aa16.15■□□□□ 0.18
PCDHGB1-201ENST00000523390 SLFN5Q08AF3 891 aa16.15■□□□□ 0.18
PCDHGB1-201ENST00000523390 EMILIN1Q9Y6C2 1016 aa16.15■□□□□ 0.18
PCDHGB1-201ENST00000523390 ST18O60284 1047 aa16.14■□□□□ 0.17
PCDHGB1-201ENST00000523390 PRAG1Q86YV5 1406 aa16.14■□□□□ 0.17
PCDHGB1-201ENST00000523390 CEP170Q5SW79 1584 aa16.14■□□□□ 0.17
PCDHGB1-201ENST00000523390 ZNF530Q6P9A1 599 aaPredicted RBP16.13■□□□□ 0.17
PCDHGB1-201ENST00000523390 RALGAPBQ86X10 1494 aa16.13■□□□□ 0.17
PCDHGB1-201ENST00000523390 STRN4Q9NRL3 753 aa16.13■□□□□ 0.17
PCDHGB1-201ENST00000523390 ISY1Q9ULR0 285 aaKnown RBP16.13■□□□□ 0.17
PCDHGB1-201ENST00000523390 FOXD4L5Q5VV16 416 aaPredicted RBP16.13■□□□□ 0.17
PCDHGB1-201ENST00000523390 RIC3Q7Z5B4 369 aa16.13■□□□□ 0.17
PCDHGB1-201ENST00000523390 FOXD4L4Q8WXT5 416 aaPredicted RBP16.13■□□□□ 0.17
PCDHGB1-201ENST00000523390 MAGI3Q5TCQ9 1506 aa16.12■□□□□ 0.17
PCDHGB1-201ENST00000523390 SLC4A2P04920 1241 aa16.12■□□□□ 0.17
PCDHGB1-201ENST00000523390 ZC3H6P61129 1189 aaKnown RBP16.12■□□□□ 0.17
PCDHGB1-201ENST00000523390 AAMPQ13685 434 aa16.12■□□□□ 0.17
PCDHGB1-201ENST00000523390 PPP6R1Q9UPN7 881 aa16.12■□□□□ 0.17
PCDHGB1-201ENST00000523390 UBTFL1P0CB47 393 aaPredicted RBP16.12■□□□□ 0.17
PCDHGB1-201ENST00000523390 CCDC30Q5VVM6 783 aa16.12■□□□□ 0.17
PCDHGB1-201ENST00000523390 PZPP20742 1482 aa16.11■□□□□ 0.17
PCDHGB1-201ENST00000523390 NFE2L2Q16236 605 aa16.11■□□□□ 0.17
PCDHGB1-201ENST00000523390 DIAPH3Q9NSV4 1193 aa16.11■□□□□ 0.17
PCDHGB1-201ENST00000523390 FRAT2O75474 233 aaPredicted RBP16.11■□□□□ 0.17
PCDHGB1-201ENST00000523390 IFIT2P09913 472 aaKnown RBP16.11■□□□□ 0.17
PCDHGB1-201ENST00000523390 HSP90B1P14625 803 aaKnown RBP16.11■□□□□ 0.17
PCDHGB1-201ENST00000523390 HDGFL1Q5TGJ6 251 aa16.11■□□□□ 0.17
PCDHGB1-201ENST00000523390 PDZRN3Q9UPQ7 1066 aa16.11■□□□□ 0.17
PCDHGB1-201ENST00000523390 ABCC10Q5T3U5 1492 aa16.1■□□□□ 0.17
PCDHGB1-201ENST00000523390 SHANK2Q9UPX8 1470 aa16.1■□□□□ 0.17
PCDHGB1-201ENST00000523390 GNL2Q13823 731 aaKnown RBP16.1■□□□□ 0.17
PCDHGB1-201ENST00000523390 ATF7IPQ6VMQ6 1270 aa16.1■□□□□ 0.17
PCDHGB1-201ENST00000523390 DNMT1P26358 1616 aaKnown RBP16.1■□□□□ 0.17
PCDHGB1-201ENST00000523390 G3BP1Q13283 466 aaKnown RBP eCLIP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms