RNA–Protein interactions for RNA: ENST00000523387.5

CSMD1-212, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 3,989 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-212ENST00000523387 NOB1Q9ULX3 412 aaKnown RBP11.17□□□□□ -0.62
CSMD1-212ENST00000523387 KIF3BO15066 747 aa11.16□□□□□ -0.62
CSMD1-212ENST00000523387 SSFA2P28290 1259 aa11.16□□□□□ -0.62
CSMD1-212ENST00000523387 NUCB2P80303 420 aa11.16□□□□□ -0.62
CSMD1-212ENST00000523387 CFAP44Q96MT7 982 aa11.16□□□□□ -0.62
CSMD1-212ENST00000523387 ST18O60284 1047 aa11.16□□□□□ -0.62
CSMD1-212ENST00000523387 ATF7IPQ6VMQ6 1270 aa11.16□□□□□ -0.62
CSMD1-212ENST00000523387 RNF214Q8ND24 703 aa11.16□□□□□ -0.62
CSMD1-212ENST00000523387 SLC12A5Q9H2X9 1139 aa11.16□□□□□ -0.62
CSMD1-212ENST00000523387 CSPP1Q1MSJ5 1256 aa11.16□□□□□ -0.62
CSMD1-212ENST00000523387 SPAG9O60271 1321 aaKnown RBP11.15□□□□□ -0.62
CSMD1-212ENST00000523387 KIF16BQ96L93 1317 aa11.15□□□□□ -0.62
CSMD1-212ENST00000523387 NOL8Q76FK4 1167 aaKnown RBP11.15□□□□□ -0.62
CSMD1-212ENST00000523387 UQCRHLA0A096LP55 91 aa11.15□□□□□ -0.63
CSMD1-212ENST00000523387 UQCRHP07919 91 aa11.15□□□□□ -0.63
CSMD1-212ENST00000523387 RIPK4P57078 832 aa11.15□□□□□ -0.63
CSMD1-212ENST00000523387 FOXD4L6Q3SYB3 417 aaPredicted RBP11.15□□□□□ -0.63
CSMD1-212ENST00000523387 FOXD4L3Q6VB84 417 aaPredicted RBP11.15□□□□□ -0.63
CSMD1-212ENST00000523387 ADGRL2O95490 1459 aa11.15□□□□□ -0.63
CSMD1-212ENST00000523387 POLR1AO95602 1720 aaPredicted RBP11.15□□□□□ -0.63
CSMD1-212ENST00000523387 C1orf115Q9H7X2 142 aa11.14□□□□□ -0.63
CSMD1-212ENST00000523387 PRPF40AO75400 957 aaKnown RBP11.14□□□□□ -0.63
CSMD1-212ENST00000523387 CHD1LQ86WJ1 897 aa11.14□□□□□ -0.63
CSMD1-212ENST00000523387 TMEM57Q8N5G2 664 aa11.14□□□□□ -0.63
CSMD1-212ENST00000523387 STAC3Q96MF2 364 aa11.14□□□□□ -0.63
CSMD1-212ENST00000523387 ASXL1Q8IXJ9 1541 aa11.14□□□□□ -0.63
CSMD1-212ENST00000523387 XPCQ01831 940 aaPredicted RBP11.14□□□□□ -0.63
CSMD1-212ENST00000523387 KIF21AQ7Z4S6 1674 aa11.14□□□□□ -0.63
CSMD1-212ENST00000523387 PIK3C2GO75747 1445 aa11.14□□□□□ -0.63
CSMD1-212ENST00000523387 SYAP1Q96A49 352 aaPredicted RBP11.13□□□□□ -0.63
CSMD1-212ENST00000523387 SCAPERQ9BY12 1400 aa11.13□□□□□ -0.63
CSMD1-212ENST00000523387 CHAF1AQ13111 956 aaPredicted RBP11.13□□□□□ -0.63
CSMD1-212ENST00000523387 TRMT2AQ8IZ69 625 aaKnown RBP11.13□□□□□ -0.63
CSMD1-212ENST00000523387 SSH1Q8WYL5 1049 aa11.13□□□□□ -0.63
CSMD1-212ENST00000523387 CDC45O75419 566 aa11.13□□□□□ -0.63
CSMD1-212ENST00000523387 TRIM27P14373 513 aa11.13□□□□□ -0.63
CSMD1-212ENST00000523387 CCDC141Q6ZP82 1450 aa11.13□□□□□ -0.63
CSMD1-212ENST00000523387 PTPRGP23470 1445 aa11.12□□□□□ -0.63
CSMD1-212ENST00000523387 RAPGEF6Q8TEU7 1601 aa11.12□□□□□ -0.63
CSMD1-212ENST00000523387 MAGI1Q96QZ7 1491 aaPredicted RBP11.12□□□□□ -0.63
CSMD1-212ENST00000523387 LRRIQ1Q96JM4 1722 aa11.12□□□□□ -0.63
CSMD1-212ENST00000523387 FAM135AQ9P2D6 1515 aa11.12□□□□□ -0.63
CSMD1-212ENST00000523387 GPRASP1Q5JY77 1395 aa11.12□□□□□ -0.63
CSMD1-212ENST00000523387 STK26Q9P289 416 aa11.12□□□□□ -0.63
CSMD1-212ENST00000523387 A2MP01023 1474 aa11.12□□□□□ -0.63
CSMD1-212ENST00000523387 MTERF4Q7Z6M4 381 aaKnown RBP11.11□□□□□ -0.63
CSMD1-212ENST00000523387 CCDC39Q9UFE4 941 aa11.11□□□□□ -0.63
CSMD1-212ENST00000523387 A0A0U1RQG5 324 aaPredicted RBP11.11□□□□□ -0.63
CSMD1-212ENST00000523387 NUTM2DQ5VT03 806 aaPredicted RBP11.11□□□□□ -0.63
CSMD1-212ENST00000523387 GAS2L3Q86XJ1 694 aa11.11□□□□□ -0.63
CSMD1-212ENST00000523387 ITSN2Q9NZM3 1697 aa11.11□□□□□ -0.63
CSMD1-212ENST00000523387 NSD3Q9BZ95 1437 aa11.1□□□□□ -0.63
CSMD1-212ENST00000523387 BAG4O95429 457 aaKnown RBP11.1□□□□□ -0.63
CSMD1-212ENST00000523387 CT47B1P0C2W7 299 aaPredicted RBP11.1□□□□□ -0.63
CSMD1-212ENST00000523387 MCCP23508 829 aa11.1□□□□□ -0.63
CSMD1-212ENST00000523387 RAB3GAP1Q15042 981 aa11.1□□□□□ -0.63
CSMD1-212ENST00000523387 RABEP1Q15276 862 aa11.1□□□□□ -0.63
CSMD1-212ENST00000523387 MPNDQ8N594 471 aa11.1□□□□□ -0.63
CSMD1-212ENST00000523387 PODXL2Q9NZ53 605 aa11.1□□□□□ -0.63
CSMD1-212ENST00000523387 SMC5Q8IY18 1101 aa11.09□□□□□ -0.63
CSMD1-212ENST00000523387 SNX21Q969T3 373 aa11.09□□□□□ -0.63
CSMD1-212ENST00000523387 RBM42Q9BTD8 480 aaKnown RBP11.09□□□□□ -0.63
CSMD1-212ENST00000523387 ARHGAP5Q13017 1502 aa11.09□□□□□ -0.63
CSMD1-212ENST00000523387 MAGI2Q86UL8 1455 aa11.09□□□□□ -0.63
CSMD1-212ENST00000523387 SCAF11Q99590 1463 aaKnown RBP11.09□□□□□ -0.63
CSMD1-212ENST00000523387 HDAC1Q13547 482 aaPredicted RBP11.09□□□□□ -0.63
CSMD1-212ENST00000523387 KLHL40Q2TBA0 621 aa11.09□□□□□ -0.63
CSMD1-212ENST00000523387 OFD1O75665 1012 aa11.09□□□□□ -0.63
CSMD1-212ENST00000523387 GGNBP2Q9H3C7 697 aa11.09□□□□□ -0.63
CSMD1-212ENST00000523387 ERBB4Q15303 1308 aa11.09□□□□□ -0.63
CSMD1-212ENST00000523387 TMEM132EQ6IEE7 984 aa11.09□□□□□ -0.63
CSMD1-212ENST00000523387 GCC1Q96CN9 775 aa11.09□□□□□ -0.63
CSMD1-212ENST00000523387 PRDM10Q9NQV6 1147 aa11.09□□□□□ -0.63
CSMD1-212ENST00000523387 CARD14Q9BXL6 1004 aa11.08□□□□□ -0.64
CSMD1-212ENST00000523387 NUP160Q12769 1436 aa11.08□□□□□ -0.64
CSMD1-212ENST00000523387 INTS3Q68E01 1043 aaKnown RBP11.08□□□□□ -0.64
CSMD1-212ENST00000523387 PHF14O94880 888 aa11.07□□□□□ -0.64
CSMD1-212ENST00000523387 STAG3Q9UJ98 1225 aa11.07□□□□□ -0.64
CSMD1-212ENST00000523387 TBC1D9Q6ZT07 1266 aa11.07□□□□□ -0.64
CSMD1-212ENST00000523387 EVC2Q86UK5 1308 aa11.07□□□□□ -0.64
CSMD1-212ENST00000523387 SYCE3A1L190 88 aa11.07□□□□□ -0.64
CSMD1-212ENST00000523387 REC8O95072 547 aa11.07□□□□□ -0.64
CSMD1-212ENST00000523387 BMP2KLQ5H9B9 411 aa11.07□□□□□ -0.64
CSMD1-212ENST00000523387 GAS2L2Q8NHY3 880 aa11.07□□□□□ -0.64
CSMD1-212ENST00000523387 DNAJC5BQ9UF47 199 aa11.07□□□□□ -0.64
CSMD1-212ENST00000523387 SYNJ2O15056 1496 aa11.07□□□□□ -0.64
CSMD1-212ENST00000523387 DIAPH1O60610 1272 aaKnown RBP11.06□□□□□ -0.64
CSMD1-212ENST00000523387 TMPOP42166 694 aaKnown RBP11.06□□□□□ -0.64
CSMD1-212ENST00000523387 KIAA0556O60303 1618 aa11.06□□□□□ -0.64
CSMD1-212ENST00000523387 GGT6Q6P531 493 aa11.06□□□□□ -0.64
CSMD1-212ENST00000523387 ERCC6Q03468 1493 aa11.06□□□□□ -0.64
CSMD1-212ENST00000523387 SHANK2Q9UPX8 1470 aa11.06□□□□□ -0.64
CSMD1-212ENST00000523387 ADGBQ8N7X0 1667 aa11.06□□□□□ -0.64
CSMD1-212ENST00000523387 NUCB1Q02818 461 aa11.05□□□□□ -0.64
CSMD1-212ENST00000523387 ZSCAN23Q3MJ62 389 aa11.05□□□□□ -0.64
CSMD1-212ENST00000523387 HDGFL2Q7Z4V5 671 aaPredicted RBP11.05□□□□□ -0.64
CSMD1-212ENST00000523387 AFAP1Q8N556 730 aa11.05□□□□□ -0.64
CSMD1-212ENST00000523387 RBM27Q9P2N5 1060 aaKnown RBP11.05□□□□□ -0.64
CSMD1-212ENST00000523387 MBD3O95983 291 aa11.05□□□□□ -0.64
CSMD1-212ENST00000523387 RBM25P49756 843 aaKnown RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms