RNA–Protein interactions for RNA: ENST00000523068.1

PVT1-216, Transcript of Pvt1 oncogene, humanhuman

TSL 5 BASIC

Gene PVT1, Length 844 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-216ENST00000523068 LRP6O75581 1613 aa15.96■□□□□ 0.15
PVT1-216ENST00000523068 DHX57Q6P158 1386 aaKnown RBP15.96■□□□□ 0.15
PVT1-216ENST00000523068 SIRT1Q96EB6 747 aa15.95■□□□□ 0.14
PVT1-216ENST00000523068 STAC3Q96MF2 364 aa15.95■□□□□ 0.14
PVT1-216ENST00000523068 CFAP70Q5T0N1 1121 aa15.94■□□□□ 0.14
PVT1-216ENST00000523068 WAPLQ7Z5K2 1190 aa15.94■□□□□ 0.14
PVT1-216ENST00000523068 ORAI2Q96SN7 254 aa15.94■□□□□ 0.14
PVT1-216ENST00000523068 FMN2Q9NZ56 1722 aa15.94■□□□□ 0.14
PVT1-216ENST00000523068 POTEAQ6S8J7 498 aa15.93■□□□□ 0.14
PVT1-216ENST00000523068 DDX17Q92841 729 aaKnown RBP15.93■□□□□ 0.14
PVT1-216ENST00000523068 SOS2Q07890 1332 aaPredicted RBP15.92■□□□□ 0.14
PVT1-216ENST00000523068 PNPLA6Q8IY17 1366 aa15.91■□□□□ 0.14
PVT1-216ENST00000523068 PLEKHH1Q9ULM0 1364 aa15.91■□□□□ 0.14
PVT1-216ENST00000523068 NUTM2BA6NNL0 878 aaPredicted RBP15.91■□□□□ 0.14
PVT1-216ENST00000523068 NUTM2EB1AL46 878 aaPredicted RBP15.91■□□□□ 0.14
PVT1-216ENST00000523068 ESCO1Q5FWF5 840 aa15.91■□□□□ 0.14
PVT1-216ENST00000523068 ZNF772Q68DY9 489 aaPredicted RBP15.91■□□□□ 0.14
PVT1-216ENST00000523068 NUTM2AQ8IVF1 878 aaPredicted RBP15.91■□□□□ 0.14
PVT1-216ENST00000523068 DCAF11Q8TEB1 546 aa15.91■□□□□ 0.14
PVT1-216ENST00000523068 NPHP3Q7Z494 1330 aa15.91■□□□□ 0.14
PVT1-216ENST00000523068 DLC1Q96QB1 1528 aa15.9■□□□□ 0.14
PVT1-216ENST00000523068 KIF1AQ12756 1690 aa15.9■□□□□ 0.14
PVT1-216ENST00000523068 KDM2AQ9Y2K7 1162 aa15.89■□□□□ 0.13
PVT1-216ENST00000523068 RGPD8O14715 1765 aaPredicted RBP15.89■□□□□ 0.13
PVT1-216ENST00000523068 ADGRB1O14514 1584 aa15.88■□□□□ 0.13
PVT1-216ENST00000523068 COL22A1Q8NFW1 1626 aaPredicted RBP15.87■□□□□ 0.13
PVT1-216ENST00000523068 PRAM1Q96QH2 718 aa15.87■□□□□ 0.13
PVT1-216ENST00000523068 POGKQ9P215 609 aa15.87■□□□□ 0.13
PVT1-216ENST00000523068 NUTM2FA1L443 756 aa15.86■□□□□ 0.13
PVT1-216ENST00000523068 PXDNQ92626 1479 aa15.85■□□□□ 0.13
PVT1-216ENST00000523068 ADGRB2O60241 1585 aa15.85■□□□□ 0.13
PVT1-216ENST00000523068 KIAA1210Q9ULL0 1709 aa15.85■□□□□ 0.13
PVT1-216ENST00000523068 FOXO3O43524 673 aa15.84■□□□□ 0.13
PVT1-216ENST00000523068 MARF1Q9Y4F3 1742 aaKnown RBP15.83■□□□□ 0.13
PVT1-216ENST00000523068 SAFB2Q14151 953 aaKnown RBP eCLIP15.83■□□□□ 0.12
PVT1-216ENST00000523068 C8orf37Q96NL8 207 aa15.83■□□□□ 0.12
PVT1-216ENST00000523068 TRAK1Q9UPV9 953 aa15.83■□□□□ 0.12
PVT1-216ENST00000523068 AFF2P51816 1311 aa15.83■□□□□ 0.12
PVT1-216ENST00000523068 ARHGEF28Q8N1W1 1705 aaKnown RBP15.82■□□□□ 0.12
PVT1-216ENST00000523068 ANKARQ7Z5J8 1434 aa15.8■□□□□ 0.12
PVT1-216ENST00000523068 EIF3AQ14152 1382 aaKnown RBP15.8■□□□□ 0.12
PVT1-216ENST00000523068 ADAMTS2O95450 1211 aa15.8■□□□□ 0.12
PVT1-216ENST00000523068 RXRBP28702 533 aa15.8■□□□□ 0.12
PVT1-216ENST00000523068 NGLY1Q96IV0 654 aa15.8■□□□□ 0.12
PVT1-216ENST00000523068 PHF8Q9UPP1 1060 aa15.8■□□□□ 0.12
PVT1-216ENST00000523068 USP32Q8NFA0 1604 aa15.79■□□□□ 0.12
PVT1-216ENST00000523068 XPCQ01831 940 aaPredicted RBP15.79■□□□□ 0.12
PVT1-216ENST00000523068 CDK12Q9NYV4 1490 aaPredicted RBP15.78■□□□□ 0.12
PVT1-216ENST00000523068 PSME1Q06323 249 aa15.78■□□□□ 0.12
PVT1-216ENST00000523068 ITSN1Q15811 1721 aa15.77■□□□□ 0.12
PVT1-216ENST00000523068 KRT28Q7Z3Y7 464 aa15.77■□□□□ 0.12
PVT1-216ENST00000523068 TULP4Q9NRJ4 1543 aa15.77■□□□□ 0.11
PVT1-216ENST00000523068 SPATA31A3Q5VYP0 1347 aa15.76■□□□□ 0.11
PVT1-216ENST00000523068 MINK1Q8N4C8 1332 aaPredicted RBP15.76■□□□□ 0.11
PVT1-216ENST00000523068 HIRIP3Q9BW71 556 aaPredicted RBP15.76■□□□□ 0.11
PVT1-216ENST00000523068 QTRT2Q9H974 415 aaKnown RBP15.76■□□□□ 0.11
PVT1-216ENST00000523068 TNS3Q68CZ2 1445 aa15.75■□□□□ 0.11
PVT1-216ENST00000523068 WASLO00401 505 aaPredicted RBP15.74■□□□□ 0.11
PVT1-216ENST00000523068 RBM6P78332 1123 aaKnown RBP15.74■□□□□ 0.11
PVT1-216ENST00000523068 FNBP4Q8N3X1 1017 aaPredicted RBP15.74■□□□□ 0.11
PVT1-216ENST00000523068 USP21Q9UK80 565 aa15.74■□□□□ 0.11
PVT1-216ENST00000523068 SBNO1A3KN83 1393 aa15.74■□□□□ 0.11
PVT1-216ENST00000523068 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.72■□□□□ 0.11
PVT1-216ENST00000523068 PMFBP1Q8TBY8 1022 aa15.72■□□□□ 0.11
PVT1-216ENST00000523068 TRPC5Q9UL62 973 aaPredicted RBP15.72■□□□□ 0.11
PVT1-216ENST00000523068 ARHGEF10O15013 1369 aa15.72■□□□□ 0.11
PVT1-216ENST00000523068 ABCA3Q99758 1704 aa15.71■□□□□ 0.11
PVT1-216ENST00000523068 TRPM3Q9HCF6 1732 aaPredicted RBP15.71■□□□□ 0.11
PVT1-216ENST00000523068 GPRASP1Q5JY77 1395 aa15.71■□□□□ 0.11
PVT1-216ENST00000523068 HAP1P54257 671 aaPredicted RBP15.7■□□□□ 0.1
PVT1-216ENST00000523068 LMOD2Q6P5Q4 547 aa15.69■□□□□ 0.1
PVT1-216ENST00000523068 L3MBTL2Q969R5 705 aa15.69■□□□□ 0.1
PVT1-216ENST00000523068 ALS2Q96Q42 1657 aa15.69■□□□□ 0.1
PVT1-216ENST00000523068 PRR36Q9H6K5 1346 aa15.68■□□□□ 0.1
PVT1-216ENST00000523068 ATRNO75882 1429 aa15.68■□□□□ 0.1
PVT1-216ENST00000523068 TRPM1Q7Z4N2 1603 aa15.68■□□□□ 0.1
PVT1-216ENST00000523068 ATP7BP35670 1465 aa15.68■□□□□ 0.1
PVT1-216ENST00000523068 NBPF1Q3BBV0 1214 aa15.68■□□□□ 0.1
PVT1-216ENST00000523068 NGDNQ8NEJ9 315 aaKnown RBP15.68■□□□□ 0.1
PVT1-216ENST00000523068 NWD2Q9ULI1 1742 aa15.68■□□□□ 0.1
PVT1-216ENST00000523068 RGS12O14924 1447 aa15.68■□□□□ 0.1
PVT1-216ENST00000523068 TOPAZ1Q8N9V7 1692 aa15.67■□□□□ 0.1
PVT1-216ENST00000523068 QRICH2Q9H0J4 1663 aa15.67■□□□□ 0.1
PVT1-216ENST00000523068 BCL9LQ86UU0 1499 aa15.67■□□□□ 0.1
PVT1-216ENST00000523068 SIN3AQ96ST3 1273 aa15.67■□□□□ 0.1
PVT1-216ENST00000523068 NEUROD1Q13562 356 aa15.66■□□□□ 0.1
PVT1-216ENST00000523068 NUDT16Q96DE0 195 aaKnown RBP15.66■□□□□ 0.1
PVT1-216ENST00000523068 CDK19Q9BWU1 502 aa15.66■□□□□ 0.1
PVT1-216ENST00000523068 PLCH1Q4KWH8 1693 aa15.66■□□□□ 0.1
PVT1-216ENST00000523068 SLIT2O94813 1529 aa15.65■□□□□ 0.1
PVT1-216ENST00000523068 CENPJQ9HC77 1338 aaPredicted RBP15.65■□□□□ 0.1
PVT1-216ENST00000523068 UNC5CLQ8IV45 518 aa15.64■□□□□ 0.09
PVT1-216ENST00000523068 UPF1Q92900 1129 aaKnown RBP eCLIP15.64■□□□□ 0.09
PVT1-216ENST00000523068 CABLES1Q8TDN4 633 aa15.63■□□□□ 0.09
PVT1-216ENST00000523068 CCDC61Q9Y6R9 512 aa15.63■□□□□ 0.09
PVT1-216ENST00000523068 CRYBG1Q9Y4K1 1723 aa15.63■□□□□ 0.09
PVT1-216ENST00000523068 PAK3O75914 559 aaPredicted RBP15.62■□□□□ 0.09
PVT1-216ENST00000523068 PLEKHG5O94827 1062 aa15.62■□□□□ 0.09
PVT1-216ENST00000523068 TRIM26Q12899 539 aaPredicted RBP15.62■□□□□ 0.09
PVT1-216ENST00000523068 GJD4Q96KN9 370 aaPredicted RBP15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms