RNA–Protein interactions for RNA: ENST00000522715.1

AP003356.1-201, humanhuman

TSL 3

Gene AP003356.1, Length 692 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003356.1-201ENST00000522715 SAFB2Q14151 953 aaKnown RBP eCLIP8.7□□□□□ -1.02
AP003356.1-201ENST00000522715 GPRASP1Q5JY77 1395 aa8.7□□□□□ -1.02
AP003356.1-201ENST00000522715 DCCP43146 1447 aa8.7□□□□□ -1.02
AP003356.1-201ENST00000522715 SCAF1Q9H7N4 1312 aaKnown RBP8.69□□□□□ -1.02
AP003356.1-201ENST00000522715 ROCK2O75116 1388 aaKnown RBP8.69□□□□□ -1.02
AP003356.1-201ENST00000522715 KNDC1Q76NI1 1749 aa8.68□□□□□ -1.02
AP003356.1-201ENST00000522715 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.68□□□□□ -1.02
AP003356.1-201ENST00000522715 CARD11Q9BXL7 1154 aa8.68□□□□□ -1.02
AP003356.1-201ENST00000522715 MST1RQ04912 1400 aa8.68□□□□□ -1.02
AP003356.1-201ENST00000522715 TRPM1Q7Z4N2 1603 aa8.67□□□□□ -1.02
AP003356.1-201ENST00000522715 RALGAPBQ86X10 1494 aa8.67□□□□□ -1.02
AP003356.1-201ENST00000522715 MINK1Q8N4C8 1332 aaPredicted RBP8.67□□□□□ -1.02
AP003356.1-201ENST00000522715 C1orf167Q5SNV9 1468 aa8.66□□□□□ -1.02
AP003356.1-201ENST00000522715 CENPJQ9HC77 1338 aaPredicted RBP8.66□□□□□ -1.02
AP003356.1-201ENST00000522715 WASLO00401 505 aaPredicted RBP8.66□□□□□ -1.02
AP003356.1-201ENST00000522715 HSPA1LP34931 641 aa8.66□□□□□ -1.02
AP003356.1-201ENST00000522715 BRINP3Q76B58 766 aa8.66□□□□□ -1.02
AP003356.1-201ENST00000522715 ORAI2Q96SN7 254 aa8.66□□□□□ -1.02
AP003356.1-201ENST00000522715 HIRIP3Q9BW71 556 aaPredicted RBP8.66□□□□□ -1.02
AP003356.1-201ENST00000522715 NALCNQ8IZF0 1738 aa8.66□□□□□ -1.02
AP003356.1-201ENST00000522715 NUTM2FA1L443 756 aa8.65□□□□□ -1.02
AP003356.1-201ENST00000522715 ESCO1Q5FWF5 840 aa8.64□□□□□ -1.03
AP003356.1-201ENST00000522715 CDK19Q9BWU1 502 aa8.64□□□□□ -1.03
AP003356.1-201ENST00000522715 CDC42BPGQ6DT37 1551 aa8.64□□□□□ -1.03
AP003356.1-201ENST00000522715 ARHGEF28Q8N1W1 1705 aaKnown RBP8.63□□□□□ -1.03
AP003356.1-201ENST00000522715 EIF3AQ14152 1382 aaKnown RBP8.62□□□□□ -1.03
AP003356.1-201ENST00000522715 PRR36Q9H6K5 1346 aa8.62□□□□□ -1.03
AP003356.1-201ENST00000522715 ADGRB2O60241 1585 aa8.62□□□□□ -1.03
AP003356.1-201ENST00000522715 ST20-MTHFSA0A0A6YYL1 179 aa8.62□□□□□ -1.03
AP003356.1-201ENST00000522715 NUDT16Q96DE0 195 aaKnown RBP8.62□□□□□ -1.03
AP003356.1-201ENST00000522715 ROBO1Q9Y6N7 1651 aa8.62□□□□□ -1.03
AP003356.1-201ENST00000522715 ANKARQ7Z5J8 1434 aa8.62□□□□□ -1.03
AP003356.1-201ENST00000522715 DDX17Q92841 729 aaKnown RBP8.61□□□□□ -1.03
AP003356.1-201ENST00000522715 TESK2Q96S53 571 aa8.61□□□□□ -1.03
AP003356.1-201ENST00000522715 PHF8Q9UPP1 1060 aa8.61□□□□□ -1.03
AP003356.1-201ENST00000522715 SBNO2Q9Y2G9 1366 aa8.61□□□□□ -1.03
AP003356.1-201ENST00000522715 FMN2Q9NZ56 1722 aa8.6□□□□□ -1.03
AP003356.1-201ENST00000522715 SOS2Q07890 1332 aaPredicted RBP8.6□□□□□ -1.03
AP003356.1-201ENST00000522715 EVC2Q86UK5 1308 aa8.6□□□□□ -1.03
AP003356.1-201ENST00000522715 FOXO3O43524 673 aa8.6□□□□□ -1.03
AP003356.1-201ENST00000522715 SLC24A1O60721 1099 aa8.6□□□□□ -1.03
AP003356.1-201ENST00000522715 SRPK2P78362 688 aaKnown RBP8.6□□□□□ -1.03
AP003356.1-201ENST00000522715 PMFBP1Q8TBY8 1022 aa8.6□□□□□ -1.03
AP003356.1-201ENST00000522715 CABP2Q9NPB3 220 aa8.6□□□□□ -1.03
AP003356.1-201ENST00000522715 CCDC61Q9Y6R9 512 aa8.6□□□□□ -1.03
AP003356.1-201ENST00000522715 NPHP3Q7Z494 1330 aa8.59□□□□□ -1.03
AP003356.1-201ENST00000522715 PLEKHG3A1L390 1219 aa8.59□□□□□ -1.03
AP003356.1-201ENST00000522715 LRRC59Q96AG4 307 aaKnown RBP8.59□□□□□ -1.03
AP003356.1-201ENST00000522715 USP47Q96K76 1375 aa8.59□□□□□ -1.03
AP003356.1-201ENST00000522715 TULP4Q9NRJ4 1543 aa8.59□□□□□ -1.03
AP003356.1-201ENST00000522715 AHDC1Q5TGY3 1603 aaPredicted RBP8.58□□□□□ -1.04
AP003356.1-201ENST00000522715 KRT28Q7Z3Y7 464 aa8.58□□□□□ -1.04
AP003356.1-201ENST00000522715 PUS7Q96PZ0 661 aaKnown RBP8.58□□□□□ -1.04
AP003356.1-201ENST00000522715 USP32Q8NFA0 1604 aa8.58□□□□□ -1.04
AP003356.1-201ENST00000522715 ATP7BP35670 1465 aa8.57□□□□□ -1.04
AP003356.1-201ENST00000522715 EIF4G2P78344 907 aaKnown RBP eCLIP8.57□□□□□ -1.04
AP003356.1-201ENST00000522715 XPCQ01831 940 aaPredicted RBP8.57□□□□□ -1.04
AP003356.1-201ENST00000522715 PSME1Q06323 249 aa8.57□□□□□ -1.04
AP003356.1-201ENST00000522715 NGDNQ8NEJ9 315 aaKnown RBP8.57□□□□□ -1.04
AP003356.1-201ENST00000522715 CABP1Q9NZU7 370 aa8.57□□□□□ -1.04
AP003356.1-201ENST00000522715 JCADQ9P266 1359 aa8.57□□□□□ -1.04
AP003356.1-201ENST00000522715 QRICH2Q9H0J4 1663 aa8.56□□□□□ -1.04
AP003356.1-201ENST00000522715 HSPA5P11021 654 aaKnown RBP8.56□□□□□ -1.04
AP003356.1-201ENST00000522715 ACEP12821 1306 aa8.55□□□□□ -1.04
AP003356.1-201ENST00000522715 COL16A1Q07092 1604 aaPredicted RBP8.55□□□□□ -1.04
AP003356.1-201ENST00000522715 NHSL1Q5SYE7 1610 aa8.55□□□□□ -1.04
AP003356.1-201ENST00000522715 PHLPP1O60346 1717 aa8.55□□□□□ -1.04
AP003356.1-201ENST00000522715 TMF1P82094 1093 aa8.55□□□□□ -1.04
AP003356.1-201ENST00000522715 POLR3AO14802 1390 aaPredicted RBP8.55□□□□□ -1.04
AP003356.1-201ENST00000522715 ATAD2Q6PL18 1390 aa8.55□□□□□ -1.04
AP003356.1-201ENST00000522715 PXDNQ92626 1479 aa8.55□□□□□ -1.04
AP003356.1-201ENST00000522715 RGPD8O14715 1765 aaPredicted RBP8.55□□□□□ -1.04
AP003356.1-201ENST00000522715 SPATA31A3Q5VYP0 1347 aa8.54□□□□□ -1.04
AP003356.1-201ENST00000522715 PPIP5K1Q6PFW1 1433 aa8.54□□□□□ -1.04
AP003356.1-201ENST00000522715 SBNO1A3KN83 1393 aa8.54□□□□□ -1.04
AP003356.1-201ENST00000522715 PNPLA6Q8IY17 1366 aa8.54□□□□□ -1.04
AP003356.1-201ENST00000522715 ZNF692Q9BU19 519 aaPredicted RBP8.54□□□□□ -1.04
AP003356.1-201ENST00000522715 SPATA31A6Q5VVP1 1343 aa8.54□□□□□ -1.04
AP003356.1-201ENST00000522715 KIF1AQ12756 1690 aa8.53□□□□□ -1.04
AP003356.1-201ENST00000522715 DISP3Q9P2K9 1392 aa8.53□□□□□ -1.04
AP003356.1-201ENST00000522715 CDCA8Q53HL2 280 aa8.53□□□□□ -1.04
AP003356.1-201ENST00000522715 SLC12A5Q9H2X9 1139 aa8.53□□□□□ -1.04
AP003356.1-201ENST00000522715 TMC1Q8TDI8 760 aa8.52□□□□□ -1.05
AP003356.1-201ENST00000522715 BRD4O60885 1362 aaPredicted RBP8.51□□□□□ -1.05
AP003356.1-201ENST00000522715 TOPAZ1Q8N9V7 1692 aa8.51□□□□□ -1.05
AP003356.1-201ENST00000522715 NUTM2BA6NNL0 878 aaPredicted RBP8.51□□□□□ -1.05
AP003356.1-201ENST00000522715 NUTM2EB1AL46 878 aaPredicted RBP8.51□□□□□ -1.05
AP003356.1-201ENST00000522715 C11orf95C9JLR9 678 aaPredicted RBP8.51□□□□□ -1.05
AP003356.1-201ENST00000522715 PAK3O75914 559 aaPredicted RBP8.51□□□□□ -1.05
AP003356.1-201ENST00000522715 NUTM2AQ8IVF1 878 aaPredicted RBP8.51□□□□□ -1.05
AP003356.1-201ENST00000522715 CPSF1Q10570 1443 aaKnown RBP8.51□□□□□ -1.05
AP003356.1-201ENST00000522715 ZEB1P37275 1124 aaPredicted RBP8.5□□□□□ -1.05
AP003356.1-201ENST00000522715 ITSN1Q15811 1721 aa8.5□□□□□ -1.05
AP003356.1-201ENST00000522715 TNS3Q68CZ2 1445 aa8.5□□□□□ -1.05
AP003356.1-201ENST00000522715 LMOD2Q6P5Q4 547 aa8.5□□□□□ -1.05
AP003356.1-201ENST00000522715 SSH2Q76I76 1423 aa8.5□□□□□ -1.05
AP003356.1-201ENST00000522715 TERF2IPQ9NYB0 399 aa8.5□□□□□ -1.05
AP003356.1-201ENST00000522715 ARHGEF10O15013 1369 aa8.49□□□□□ -1.05
AP003356.1-201ENST00000522715 NINLQ9Y2I6 1382 aa8.49□□□□□ -1.05
AP003356.1-201ENST00000522715 USP6P35125 1406 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms