RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 C1orf167Q5SNV9 1468 aa25.92■■□□□ 1.74
CLK4-211ENST00000522556 NHSL1Q5SYE7 1610 aa25.92■■□□□ 1.74
CLK4-211ENST00000522556 ARHGEF28Q8N1W1 1705 aaKnown RBP25.91■■□□□ 1.74
CLK4-211ENST00000522556 KIAA1210Q9ULL0 1709 aa25.91■■□□□ 1.74
CLK4-211ENST00000522556 PCGF6Q9BYE7 350 aa25.9■■□□□ 1.74
CLK4-211ENST00000522556 FMN2Q9NZ56 1722 aa25.9■■□□□ 1.74
CLK4-211ENST00000522556 SAFB2Q14151 953 aaKnown RBP eCLIP25.89■■□□□ 1.74
CLK4-211ENST00000522556 PRAM1Q96QH2 718 aa25.89■■□□□ 1.74
CLK4-211ENST00000522556 TRAK1Q9UPV9 953 aa25.89■■□□□ 1.74
CLK4-211ENST00000522556 DDX17Q92841 729 aaKnown RBP25.88■■□□□ 1.73
CLK4-211ENST00000522556 STAC3Q96MF2 364 aa25.88■■□□□ 1.73
CLK4-211ENST00000522556 NBPF1Q3BBV0 1214 aa25.86■■□□□ 1.73
CLK4-211ENST00000522556 NUTM2FA1L443 756 aa25.85■■□□□ 1.73
CLK4-211ENST00000522556 ORAI2Q96SN7 254 aa25.85■■□□□ 1.73
CLK4-211ENST00000522556 TRPM1Q7Z4N2 1603 aa25.85■■□□□ 1.73
CLK4-211ENST00000522556 RGPD8O14715 1765 aaPredicted RBP25.84■■□□□ 1.73
CLK4-211ENST00000522556 DISP3Q9P2K9 1392 aa25.84■■□□□ 1.73
CLK4-211ENST00000522556 SIRT1Q96EB6 747 aa25.83■■□□□ 1.73
CLK4-211ENST00000522556 ADGRB2O60241 1585 aa25.82■■□□□ 1.72
CLK4-211ENST00000522556 USP32Q8NFA0 1604 aa25.8■■□□□ 1.72
CLK4-211ENST00000522556 POGKQ9P215 609 aa25.79■■□□□ 1.72
CLK4-211ENST00000522556 HIRIP3Q9BW71 556 aaPredicted RBP25.78■■□□□ 1.72
CLK4-211ENST00000522556 SHPRHQ149N8 1683 aa25.77■■□□□ 1.72
CLK4-211ENST00000522556 NBPF8Q3BBV2 869 aa25.76■■□□□ 1.71
CLK4-211ENST00000522556 MINK1Q8N4C8 1332 aaPredicted RBP25.76■■□□□ 1.71
CLK4-211ENST00000522556 JCADQ9P266 1359 aa25.74■■□□□ 1.71
CLK4-211ENST00000522556 ESCO1Q5FWF5 840 aa25.73■■□□□ 1.71
CLK4-211ENST00000522556 LRP6O75581 1613 aa25.73■■□□□ 1.71
CLK4-211ENST00000522556 TONSLQ96HA7 1378 aa25.71■■□□□ 1.71
CLK4-211ENST00000522556 KIF1AQ12756 1690 aa25.69■■□□□ 1.7
CLK4-211ENST00000522556 QRICH2Q9H0J4 1663 aa25.69■■□□□ 1.7
CLK4-211ENST00000522556 PXDNQ92626 1479 aa25.69■■□□□ 1.7
CLK4-211ENST00000522556 XPCQ01831 940 aaPredicted RBP25.69■■□□□ 1.7
CLK4-211ENST00000522556 PRR36Q9H6K5 1346 aa25.68■■□□□ 1.7
CLK4-211ENST00000522556 SOS2Q07890 1332 aaPredicted RBP25.67■■□□□ 1.7
CLK4-211ENST00000522556 ILDR2Q71H61 639 aa25.67■■□□□ 1.7
CLK4-211ENST00000522556 TULP4Q9NRJ4 1543 aa25.67■■□□□ 1.7
CLK4-211ENST00000522556 PNPLA6Q8IY17 1366 aa25.66■■□□□ 1.7
CLK4-211ENST00000522556 FOXO3O43524 673 aa25.65■■□□□ 1.7
CLK4-211ENST00000522556 ROCK2O75116 1388 aaKnown RBP25.65■■□□□ 1.7
CLK4-211ENST00000522556 ANKARQ7Z5J8 1434 aa25.63■■□□□ 1.69
CLK4-211ENST00000522556 WASLO00401 505 aaPredicted RBP25.63■■□□□ 1.69
CLK4-211ENST00000522556 ATP7BP35670 1465 aa25.62■■□□□ 1.69
CLK4-211ENST00000522556 RALGAPBQ86X10 1494 aa25.62■■□□□ 1.69
CLK4-211ENST00000522556 RGS17Q9UGC6 210 aaPredicted RBP25.61■■□□□ 1.69
CLK4-211ENST00000522556 NPHP3Q7Z494 1330 aa25.61■■□□□ 1.69
CLK4-211ENST00000522556 GPRASP1Q5JY77 1395 aa25.6■■□□□ 1.69
CLK4-211ENST00000522556 LRRC59Q96AG4 307 aaKnown RBP25.6■■□□□ 1.69
CLK4-211ENST00000522556 PHF8Q9UPP1 1060 aa25.6■■□□□ 1.69
CLK4-211ENST00000522556 TOPAZ1Q8N9V7 1692 aa25.6■■□□□ 1.69
CLK4-211ENST00000522556 CENPJQ9HC77 1338 aaPredicted RBP25.6■■□□□ 1.69
CLK4-211ENST00000522556 PHF23Q9BUL5 403 aaPredicted RBP25.59■■□□□ 1.69
CLK4-211ENST00000522556 SPATA31A6Q5VVP1 1343 aa25.59■■□□□ 1.69
CLK4-211ENST00000522556 NUTM2BA6NNL0 878 aaPredicted RBP25.58■■□□□ 1.69
CLK4-211ENST00000522556 NUTM2EB1AL46 878 aaPredicted RBP25.58■■□□□ 1.69
CLK4-211ENST00000522556 NUTM2AQ8IVF1 878 aaPredicted RBP25.58■■□□□ 1.69
CLK4-211ENST00000522556 PMFBP1Q8TBY8 1022 aa25.58■■□□□ 1.69
CLK4-211ENST00000522556 COL22A1Q8NFW1 1626 aaPredicted RBP25.58■■□□□ 1.69
CLK4-211ENST00000522556 ITSN1Q15811 1721 aa25.57■■□□□ 1.68
CLK4-211ENST00000522556 TRPM3Q9HCF6 1732 aaPredicted RBP25.55■■□□□ 1.68
CLK4-211ENST00000522556 CDK19Q9BWU1 502 aa25.55■■□□□ 1.68
CLK4-211ENST00000522556 EIF3AQ14152 1382 aaKnown RBP25.54■■□□□ 1.68
CLK4-211ENST00000522556 KRT28Q7Z3Y7 464 aa25.52■■□□□ 1.68
CLK4-211ENST00000522556 NUDT16Q96DE0 195 aaKnown RBP25.51■■□□□ 1.67
CLK4-211ENST00000522556 SPATA31A3Q5VYP0 1347 aa25.49■■□□□ 1.67
CLK4-211ENST00000522556 CARD11Q9BXL7 1154 aa25.49■■□□□ 1.67
CLK4-211ENST00000522556 TNS3Q68CZ2 1445 aa25.48■■□□□ 1.67
CLK4-211ENST00000522556 CLSPNQ9HAW4 1339 aa25.48■■□□□ 1.67
CLK4-211ENST00000522556 CABP2Q9NPB3 220 aa25.48■■□□□ 1.67
CLK4-211ENST00000522556 ABCA3Q99758 1704 aa25.48■■□□□ 1.67
CLK4-211ENST00000522556 MEX3CQ5U5Q3 659 aaKnown RBP25.47■■□□□ 1.67
CLK4-211ENST00000522556 POTEAQ6S8J7 498 aa25.47■■□□□ 1.67
CLK4-211ENST00000522556 CCER1Q8TC90 406 aaPredicted RBP25.47■■□□□ 1.67
CLK4-211ENST00000522556 ALS2Q96Q42 1657 aa25.47■■□□□ 1.67
CLK4-211ENST00000522556 MARF1Q9Y4F3 1742 aaKnown RBP25.44■■□□□ 1.66
CLK4-211ENST00000522556 ADAMTS2O95450 1211 aa25.44■■□□□ 1.66
CLK4-211ENST00000522556 SRPK2P78362 688 aaKnown RBP25.44■■□□□ 1.66
CLK4-211ENST00000522556 PLEKHG5O94827 1062 aa25.43■■□□□ 1.66
CLK4-211ENST00000522556 PSME1Q06323 249 aa25.43■■□□□ 1.66
CLK4-211ENST00000522556 SBNO1A3KN83 1393 aa25.43■■□□□ 1.66
CLK4-211ENST00000522556 PPIP5K1Q6PFW1 1433 aa25.41■■□□□ 1.66
CLK4-211ENST00000522556 NGDNQ8NEJ9 315 aaKnown RBP25.41■■□□□ 1.66
CLK4-211ENST00000522556 C8orf37Q96NL8 207 aa25.41■■□□□ 1.66
CLK4-211ENST00000522556 CCDC61Q9Y6R9 512 aa25.4■■□□□ 1.66
CLK4-211ENST00000522556 POLR3AO14802 1390 aaPredicted RBP25.4■■□□□ 1.66
CLK4-211ENST00000522556 CRYBG1Q9Y4K1 1723 aa25.4■■□□□ 1.66
CLK4-211ENST00000522556 CABLES1Q8TDN4 633 aa25.39■■□□□ 1.66
CLK4-211ENST00000522556 ACEP12821 1306 aa25.38■■□□□ 1.65
CLK4-211ENST00000522556 AFF2P51816 1311 aa25.38■■□□□ 1.65
CLK4-211ENST00000522556 LMOD2Q6P5Q4 547 aa25.38■■□□□ 1.65
CLK4-211ENST00000522556 SBNO2Q9Y2G9 1366 aa25.37■■□□□ 1.65
CLK4-211ENST00000522556 EVC2Q86UK5 1308 aa25.37■■□□□ 1.65
CLK4-211ENST00000522556 PLEKHG3A1L390 1219 aa25.36■■□□□ 1.65
CLK4-211ENST00000522556 ARHGEF10O15013 1369 aa25.33■■□□□ 1.65
CLK4-211ENST00000522556 CABP1Q9NZU7 370 aa25.33■■□□□ 1.65
CLK4-211ENST00000522556 AKAP12Q02952 1782 aa25.32■■□□□ 1.64
CLK4-211ENST00000522556 USP47Q96K76 1375 aa25.31■■□□□ 1.64
CLK4-211ENST00000522556 ST20-MTHFSA0A0A6YYL1 179 aa25.31■■□□□ 1.64
CLK4-211ENST00000522556 PAK3O75914 559 aaPredicted RBP25.31■■□□□ 1.64
CLK4-211ENST00000522556 TESK2Q96S53 571 aa25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms