RNA–Protein interactions for RNA: ENST00000522501.1

CDKL3-208, Transcript of cyclin dependent kinase like 3, humanhuman

TSL 3

Gene CDKL3, Length 432 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3-208ENST00000522501 NUTM2EB1AL46 878 aaPredicted RBP13.3□□□□□ -0.28
CDKL3-208ENST00000522501 NUTM2AQ8IVF1 878 aaPredicted RBP13.3□□□□□ -0.28
CDKL3-208ENST00000522501 CHGAP10645 457 aaKnown RBP13.29□□□□□ -0.28
CDKL3-208ENST00000522501 FKBP8Q14318 412 aa13.29□□□□□ -0.28
CDKL3-208ENST00000522501 AMOTL2Q9Y2J4 779 aa13.29□□□□□ -0.28
CDKL3-208ENST00000522501 ROCK1Q13464 1354 aa13.29□□□□□ -0.28
CDKL3-208ENST00000522501 DSG3P32926 999 aa13.27□□□□□ -0.29
CDKL3-208ENST00000522501 MKRN4PQ13434 485 aaPredicted RBP13.27□□□□□ -0.29
CDKL3-208ENST00000522501 PTCH1Q13635 1447 aa13.27□□□□□ -0.29
CDKL3-208ENST00000522501 PPLO60437 1756 aa13.27□□□□□ -0.29
CDKL3-208ENST00000522501 METP08581 1390 aa13.26□□□□□ -0.29
CDKL3-208ENST00000522501 RBM6P78332 1123 aaKnown RBP13.26□□□□□ -0.29
CDKL3-208ENST00000522501 C1orf167Q5SNV9 1468 aa13.26□□□□□ -0.29
CDKL3-208ENST00000522501 ATAD2Q6PL18 1390 aa13.26□□□□□ -0.29
CDKL3-208ENST00000522501 PRAG1Q86YV5 1406 aa13.26□□□□□ -0.29
CDKL3-208ENST00000522501 C8orf37Q96NL8 207 aa13.26□□□□□ -0.29
CDKL3-208ENST00000522501 FAM50AQ14320 339 aaKnown RBP13.25□□□□□ -0.29
CDKL3-208ENST00000522501 LRRC59Q96AG4 307 aaKnown RBP13.25□□□□□ -0.29
CDKL3-208ENST00000522501 CDC42BPGQ6DT37 1551 aa13.24□□□□□ -0.29
CDKL3-208ENST00000522501 ABCB7O75027 752 aa13.24□□□□□ -0.29
CDKL3-208ENST00000522501 CACNB1Q02641 598 aaPredicted RBP13.24□□□□□ -0.29
CDKL3-208ENST00000522501 BRWD3Q6RI45 1802 aa13.24□□□□□ -0.29
CDKL3-208ENST00000522501 ATRNO75882 1429 aa13.23□□□□□ -0.29
CDKL3-208ENST00000522501 MYOM2P54296 1465 aa13.23□□□□□ -0.29
CDKL3-208ENST00000522501 DDX17Q92841 729 aaKnown RBP13.22□□□□□ -0.29
CDKL3-208ENST00000522501 QTRT2Q9H974 415 aaKnown RBP13.22□□□□□ -0.29
CDKL3-208ENST00000522501 NUP155O75694 1391 aa13.21□□□□□ -0.29
CDKL3-208ENST00000522501 LRP5O75197 1615 aa13.21□□□□□ -0.29
CDKL3-208ENST00000522501 KNDC1Q76NI1 1749 aa13.2□□□□□ -0.3
CDKL3-208ENST00000522501 ABCA3Q99758 1704 aa13.2□□□□□ -0.3
CDKL3-208ENST00000522501 ZBTB12Q9Y330 459 aaPredicted RBP13.2□□□□□ -0.3
CDKL3-208ENST00000522501 PXDNQ92626 1479 aa13.19□□□□□ -0.3
CDKL3-208ENST00000522501 NGLY1Q96IV0 654 aa13.19□□□□□ -0.3
CDKL3-208ENST00000522501 GLI3P10071 1580 aa13.19□□□□□ -0.3
CDKL3-208ENST00000522501 IFT172Q9UG01 1749 aa13.19□□□□□ -0.3
CDKL3-208ENST00000522501 KIF1AQ12756 1690 aa13.18□□□□□ -0.3
CDKL3-208ENST00000522501 PLCH1Q4KWH8 1693 aa13.18□□□□□ -0.3
CDKL3-208ENST00000522501 SOS2Q07890 1332 aaPredicted RBP13.18□□□□□ -0.3
CDKL3-208ENST00000522501 USP32Q8NFA0 1604 aa13.17□□□□□ -0.3
CDKL3-208ENST00000522501 FMN2Q9NZ56 1722 aa13.17□□□□□ -0.3
CDKL3-208ENST00000522501 ADAMTS2O95450 1211 aa13.17□□□□□ -0.3
CDKL3-208ENST00000522501 NWD2Q9ULI1 1742 aa13.16□□□□□ -0.3
CDKL3-208ENST00000522501 USP21Q9UK80 565 aa13.16□□□□□ -0.3
CDKL3-208ENST00000522501 TRPC5Q9UL62 973 aaPredicted RBP13.16□□□□□ -0.3
CDKL3-208ENST00000522501 ROBO2Q9HCK4 1378 aa13.16□□□□□ -0.3
CDKL3-208ENST00000522501 BCL9LQ86UU0 1499 aa13.16□□□□□ -0.3
CDKL3-208ENST00000522501 ZNF326Q5BKZ1 582 aaKnown RBP13.15□□□□□ -0.3
CDKL3-208ENST00000522501 HFM1A2PYH4 1435 aa13.14□□□□□ -0.31
CDKL3-208ENST00000522501 FNBP4Q8N3X1 1017 aaPredicted RBP13.14□□□□□ -0.31
CDKL3-208ENST00000522501 RGPD8O14715 1765 aaPredicted RBP13.14□□□□□ -0.31
CDKL3-208ENST00000522501 ZRANB1Q9UGI0 708 aa13.12□□□□□ -0.31
CDKL3-208ENST00000522501 ORAI2Q96SN7 254 aa13.11□□□□□ -0.31
CDKL3-208ENST00000522501 SLIT2O94813 1529 aa13.1□□□□□ -0.31
CDKL3-208ENST00000522501 NRAPQ86VF7 1730 aa13.1□□□□□ -0.31
CDKL3-208ENST00000522501 RALGAPBQ86X10 1494 aa13.1□□□□□ -0.31
CDKL3-208ENST00000522501 BLMP54132 1417 aaPredicted RBP13.09□□□□□ -0.31
CDKL3-208ENST00000522501 NPHP3Q7Z494 1330 aa13.09□□□□□ -0.31
CDKL3-208ENST00000522501 RGPD1P0DJD0 1748 aa13.08□□□□□ -0.32
CDKL3-208ENST00000522501 TECPR2O15040 1411 aa13.08□□□□□ -0.32
CDKL3-208ENST00000522501 CCDC125Q86Z20 511 aa13.08□□□□□ -0.32
CDKL3-208ENST00000522501 NAIPQ13075 1403 aa13.07□□□□□ -0.32
CDKL3-208ENST00000522501 TNS1Q9HBL0 1735 aaKnown RBP13.07□□□□□ -0.32
CDKL3-208ENST00000522501 SPDYE4A6NLX3 237 aa13.06□□□□□ -0.32
CDKL3-208ENST00000522501 CRYBG1Q9Y4K1 1723 aa13.05□□□□□ -0.32
CDKL3-208ENST00000522501 GJD4Q96KN9 370 aaPredicted RBP13.04□□□□□ -0.32
CDKL3-208ENST00000522501 CCDC144AA2RUR9 1427 aa13.04□□□□□ -0.32
CDKL3-208ENST00000522501 TRPM3Q9HCF6 1732 aaPredicted RBP13.03□□□□□ -0.32
CDKL3-208ENST00000522501 VGFO15240 615 aaPredicted RBP13.03□□□□□ -0.32
CDKL3-208ENST00000522501 ITGAEP38570 1179 aa13.03□□□□□ -0.32
CDKL3-208ENST00000522501 LRPPRCP42704 1394 aaKnown RBP13.03□□□□□ -0.32
CDKL3-208ENST00000522501 HRCP23327 699 aa13.02□□□□□ -0.33
CDKL3-208ENST00000522501 RPGRIP1LQ68CZ1 1315 aa13.02□□□□□ -0.33
CDKL3-208ENST00000522501 TNS3Q68CZ2 1445 aa13.02□□□□□ -0.33
CDKL3-208ENST00000522501 RRBP1Q9P2E9 1410 aaKnown RBP13.02□□□□□ -0.33
CDKL3-208ENST00000522501 ESCO1Q5FWF5 840 aa13.01□□□□□ -0.33
CDKL3-208ENST00000522501 ALS2Q96Q42 1657 aa13.01□□□□□ -0.33
CDKL3-208ENST00000522501 COL14A1Q05707 1796 aaKnown RBP13□□□□□ -0.33
CDKL3-208ENST00000522501 THSD7AQ9UPZ6 1657 aa13□□□□□ -0.33
CDKL3-208ENST00000522501 XPCQ01831 940 aaPredicted RBP13□□□□□ -0.33
CDKL3-208ENST00000522501 UNC5CLQ8IV45 518 aa13□□□□□ -0.33
CDKL3-208ENST00000522501 ADGRB2O60241 1585 aa12.99□□□□□ -0.33
CDKL3-208ENST00000522501 PROM2Q8N271 834 aa12.99□□□□□ -0.33
CDKL3-208ENST00000522501 PCGF6Q9BYE7 350 aa12.99□□□□□ -0.33
CDKL3-208ENST00000522501 PIK3C2GO75747 1445 aa12.98□□□□□ -0.33
CDKL3-208ENST00000522501 SPATA31A3Q5VYP0 1347 aa12.98□□□□□ -0.33
CDKL3-208ENST00000522501 FOXO3O43524 673 aa12.98□□□□□ -0.33
CDKL3-208ENST00000522501 SPATA31E1Q6ZUB1 1445 aa12.97□□□□□ -0.33
CDKL3-208ENST00000522501 RREB1Q92766 1687 aa12.97□□□□□ -0.33
CDKL3-208ENST00000522501 DEFB132Q7Z7B7 95 aa12.97□□□□□ -0.33
CDKL3-208ENST00000522501 NRXN1Q9ULB1 1477 aa12.97□□□□□ -0.33
CDKL3-208ENST00000522501 PLEKHH1Q9ULM0 1364 aa12.96□□□□□ -0.33
CDKL3-208ENST00000522501 ABCC11Q96J66 1382 aa12.95□□□□□ -0.34
CDKL3-208ENST00000522501 YTHDC2Q9H6S0 1430 aaKnown RBP12.95□□□□□ -0.34
CDKL3-208ENST00000522501 NUP188Q5SRE5 1749 aa12.94□□□□□ -0.34
CDKL3-208ENST00000522501 TRIM26Q12899 539 aaPredicted RBP12.94□□□□□ -0.34
CDKL3-208ENST00000522501 VPS72Q15906 364 aa12.94□□□□□ -0.34
CDKL3-208ENST00000522501 PHRF1Q9P1Y6 1649 aaKnown RBP12.94□□□□□ -0.34
CDKL3-208ENST00000522501 ITSN1Q15811 1721 aa12.93□□□□□ -0.34
CDKL3-208ENST00000522501 ADGRF5Q8IZF2 1346 aa12.93□□□□□ -0.34
CDKL3-208ENST00000522501 NUTM2FA1L443 756 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms