RNA–Protein interactions for RNA: ENST00000522136.5

CLK4-210, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,955 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-210ENST00000522136 PTCH1Q13635 1447 aa18.68■□□□□ 0.58
CLK4-210ENST00000522136 CCDC7Q96M83 1385 aa18.67■□□□□ 0.58
CLK4-210ENST00000522136 SBNO2Q9Y2G9 1366 aa18.67■□□□□ 0.58
CLK4-210ENST00000522136 DMRT2Q9Y5R5 561 aa18.67■□□□□ 0.58
CLK4-210ENST00000522136 NWD1Q149M9 1564 aa18.67■□□□□ 0.58
CLK4-210ENST00000522136 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.66■□□□□ 0.58
CLK4-210ENST00000522136 ZNF335Q9H4Z2 1342 aaPredicted RBP18.65■□□□□ 0.58
CLK4-210ENST00000522136 TULP4Q9NRJ4 1543 aa18.64■□□□□ 0.57
CLK4-210ENST00000522136 PROSER2Q86WR7 435 aaPredicted RBP18.63■□□□□ 0.57
CLK4-210ENST00000522136 DDX10Q13206 875 aaKnown RBP18.62■□□□□ 0.57
CLK4-210ENST00000522136 EVC2Q86UK5 1308 aa18.62■□□□□ 0.57
CLK4-210ENST00000522136 SLC24A1O60721 1099 aa18.62■□□□□ 0.57
CLK4-210ENST00000522136 CABP2Q9NPB3 220 aa18.61■□□□□ 0.57
CLK4-210ENST00000522136 CDK19Q9BWU1 502 aa18.61■□□□□ 0.57
CLK4-210ENST00000522136 NKTRP30414 1462 aaKnown RBP18.6■□□□□ 0.57
CLK4-210ENST00000522136 SRPK2P78362 688 aaKnown RBP18.59■□□□□ 0.57
CLK4-210ENST00000522136 WASLO00401 505 aaPredicted RBP18.59■□□□□ 0.57
CLK4-210ENST00000522136 CDCA8Q53HL2 280 aa18.59■□□□□ 0.57
CLK4-210ENST00000522136 NALCNQ8IZF0 1738 aa18.58■□□□□ 0.56
CLK4-210ENST00000522136 C14orf37Q86TY3 774 aa18.57■□□□□ 0.56
CLK4-210ENST00000522136 TMEM94Q12767 1356 aa18.56■□□□□ 0.56
CLK4-210ENST00000522136 ADGRB2O60241 1585 aa18.56■□□□□ 0.56
CLK4-210ENST00000522136 NUTM2FA1L443 756 aa18.55■□□□□ 0.56
CLK4-210ENST00000522136 XIRP1Q702N8 1843 aaKnown RBP18.54■□□□□ 0.56
CLK4-210ENST00000522136 ADGRL3Q9HAR2 1447 aa18.54■□□□□ 0.56
CLK4-210ENST00000522136 LRRC7Q96NW7 1537 aa18.53■□□□□ 0.56
CLK4-210ENST00000522136 MYOM1P52179 1685 aa18.53■□□□□ 0.56
CLK4-210ENST00000522136 TMC1Q8TDI8 760 aa18.52■□□□□ 0.56
CLK4-210ENST00000522136 PUS7Q96PZ0 661 aaKnown RBP18.52■□□□□ 0.56
CLK4-210ENST00000522136 SLC12A5Q9H2X9 1139 aa18.52■□□□□ 0.56
CLK4-210ENST00000522136 PRR36Q9H6K5 1346 aa18.52■□□□□ 0.56
CLK4-210ENST00000522136 DIEXFQ68CQ4 756 aaKnown RBP18.51■□□□□ 0.55
CLK4-210ENST00000522136 NUDT16Q96DE0 195 aaKnown RBP18.51■□□□□ 0.55
CLK4-210ENST00000522136 C19orf44Q9H6X5 657 aa18.5■□□□□ 0.55
CLK4-210ENST00000522136 RGPD8O14715 1765 aaPredicted RBP18.49■□□□□ 0.55
CLK4-210ENST00000522136 ATAD2Q6PL18 1390 aa18.49■□□□□ 0.55
CLK4-210ENST00000522136 CDC42BPGQ6DT37 1551 aa18.49■□□□□ 0.55
CLK4-210ENST00000522136 FMN2Q9NZ56 1722 aa18.49■□□□□ 0.55
CLK4-210ENST00000522136 PANK3Q9H999 370 aa18.48■□□□□ 0.55
CLK4-210ENST00000522136 CABP1Q9NZU7 370 aa18.48■□□□□ 0.55
CLK4-210ENST00000522136 USP32Q8NFA0 1604 aa18.48■□□□□ 0.55
CLK4-210ENST00000522136 NCOA3Q9Y6Q9 1424 aa18.48■□□□□ 0.55
CLK4-210ENST00000522136 ATP7BP35670 1465 aa18.48■□□□□ 0.55
CLK4-210ENST00000522136 LTBP4Q8N2S1 1624 aa18.47■□□□□ 0.55
CLK4-210ENST00000522136 CCDC61Q9Y6R9 512 aa18.46■□□□□ 0.55
CLK4-210ENST00000522136 PPIP5K1Q6PFW1 1433 aa18.45■□□□□ 0.54
CLK4-210ENST00000522136 MSH6P52701 1360 aa18.44■□□□□ 0.54
CLK4-210ENST00000522136 ATF3P18847 181 aa18.44■□□□□ 0.54
CLK4-210ENST00000522136 TOPAZ1Q8N9V7 1692 aa18.43■□□□□ 0.54
CLK4-210ENST00000522136 CARD14Q9BXL6 1004 aa18.42■□□□□ 0.54
CLK4-210ENST00000522136 ANKARQ7Z5J8 1434 aa18.42■□□□□ 0.54
CLK4-210ENST00000522136 PMFBP1Q8TBY8 1022 aa18.42■□□□□ 0.54
CLK4-210ENST00000522136 CD163L1Q9NR16 1453 aa18.42■□□□□ 0.54
CLK4-210ENST00000522136 NINLQ9Y2I6 1382 aa18.41■□□□□ 0.54
CLK4-210ENST00000522136 PER1O15534 1290 aaPredicted RBP18.41■□□□□ 0.54
CLK4-210ENST00000522136 CNGB1Q14028 1251 aaPredicted RBP18.41■□□□□ 0.54
CLK4-210ENST00000522136 DCCP43146 1447 aa18.4■□□□□ 0.54
CLK4-210ENST00000522136 CADPS2Q86UW7 1296 aa18.4■□□□□ 0.54
CLK4-210ENST00000522136 A0A1W2PP64 1363 aa18.4■□□□□ 0.54
CLK4-210ENST00000522136 ANKRD36BQ8N2N9 1353 aa18.4■□□□□ 0.54
CLK4-210ENST00000522136 ITSN1Q15811 1721 aa18.39■□□□□ 0.54
CLK4-210ENST00000522136 ESCO1Q5FWF5 840 aa18.39■□□□□ 0.53
CLK4-210ENST00000522136 ORAI2Q96SN7 254 aa18.39■□□□□ 0.53
CLK4-210ENST00000522136 PLEKHG3A1L390 1219 aa18.39■□□□□ 0.53
CLK4-210ENST00000522136 TERF2IPQ9NYB0 399 aa18.39■□□□□ 0.53
CLK4-210ENST00000522136 MST1RQ04912 1400 aa18.39■□□□□ 0.53
CLK4-210ENST00000522136 C1orf167Q5SNV9 1468 aa18.38■□□□□ 0.53
CLK4-210ENST00000522136 ACEP12821 1306 aa18.38■□□□□ 0.53
CLK4-210ENST00000522136 HDGFL2Q7Z4V5 671 aaPredicted RBP18.37■□□□□ 0.53
CLK4-210ENST00000522136 PHF8Q9UPP1 1060 aa18.37■□□□□ 0.53
CLK4-210ENST00000522136 CPSF1Q10570 1443 aaKnown RBP18.36■□□□□ 0.53
CLK4-210ENST00000522136 NSD3Q9BZ95 1437 aa18.36■□□□□ 0.53
CLK4-210ENST00000522136 KNSTRNQ9Y448 316 aa18.36■□□□□ 0.53
CLK4-210ENST00000522136 NGDNQ8NEJ9 315 aaKnown RBP18.35■□□□□ 0.53
CLK4-210ENST00000522136 AKAP12Q02952 1782 aa18.35■□□□□ 0.53
CLK4-210ENST00000522136 KTN1Q86UP2 1357 aaKnown RBP18.35■□□□□ 0.53
CLK4-210ENST00000522136 SLAIN2Q9P270 581 aa18.34■□□□□ 0.53
CLK4-210ENST00000522136 POLR3AO14802 1390 aaPredicted RBP18.33■□□□□ 0.52
CLK4-210ENST00000522136 CC2D1BQ5T0F9 858 aaKnown RBP18.33■□□□□ 0.52
CLK4-210ENST00000522136 AMER1Q5JTC6 1135 aaPredicted RBP18.32■□□□□ 0.52
CLK4-210ENST00000522136 MIER1Q8N108 512 aa18.32■□□□□ 0.52
CLK4-210ENST00000522136 ZNF692Q9BU19 519 aaPredicted RBP18.32■□□□□ 0.52
CLK4-210ENST00000522136 MON2Q7Z3U7 1717 aa18.32■□□□□ 0.52
CLK4-210ENST00000522136 FOXO3O43524 673 aa18.31■□□□□ 0.52
CLK4-210ENST00000522136 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.31■□□□□ 0.52
CLK4-210ENST00000522136 ANP32CO43423 234 aa18.3■□□□□ 0.52
CLK4-210ENST00000522136 USP6P35125 1406 aa18.3■□□□□ 0.52
CLK4-210ENST00000522136 DDX17Q92841 729 aaKnown RBP18.3■□□□□ 0.52
CLK4-210ENST00000522136 XPCQ01831 940 aaPredicted RBP18.29■□□□□ 0.52
CLK4-210ENST00000522136 BRINP3Q76B58 766 aa18.29■□□□□ 0.52
CLK4-210ENST00000522136 CGNL1Q0VF96 1302 aa18.28■□□□□ 0.52
CLK4-210ENST00000522136 EDC4Q6P2E9 1401 aaKnown RBP18.28■□□□□ 0.52
CLK4-210ENST00000522136 PSME1Q06323 249 aa18.28■□□□□ 0.52
CLK4-210ENST00000522136 PRKRIP1Q9H875 184 aaPredicted RBP18.28■□□□□ 0.52
CLK4-210ENST00000522136 KIF1AQ12756 1690 aa18.27■□□□□ 0.52
CLK4-210ENST00000522136 TTC21BQ7Z4L5 1316 aa18.26■□□□□ 0.51
CLK4-210ENST00000522136 FYB1O15117 783 aa18.26■□□□□ 0.51
CLK4-210ENST00000522136 CERKQ8TCT0 537 aa18.26■□□□□ 0.51
CLK4-210ENST00000522136 GGNBP2Q9H3C7 697 aa18.26■□□□□ 0.51
CLK4-210ENST00000522136 NRKQ7Z2Y5 1582 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms