RNA–Protein interactions for RNA: ENST00000522006.5

LAMA4-219, Transcript of laminin subunit alpha 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LAMA4, Length 6,438 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-219ENST00000522006 PANK1Q8TE04 598 aa13.75□□□□□ -0.21
LAMA4-219ENST00000522006 MRE11P49959 708 aa13.75□□□□□ -0.21
LAMA4-219ENST00000522006 CCDC43Q96MW1 224 aaKnown RBP13.75□□□□□ -0.21
LAMA4-219ENST00000522006 NINLQ9Y2I6 1382 aa13.75□□□□□ -0.21
LAMA4-219ENST00000522006 HSP90B2PQ58FF3 399 aa13.75□□□□□ -0.21
LAMA4-219ENST00000522006 CALRP27797 417 aaKnown RBP13.74□□□□□ -0.21
LAMA4-219ENST00000522006 GNAI1P63096 354 aa13.74□□□□□ -0.21
LAMA4-219ENST00000522006 CT47A1Q5JQC4 288 aaPredicted RBP13.74□□□□□ -0.21
LAMA4-219ENST00000522006 CAGE1Q8TC20 777 aa13.73□□□□□ -0.21
LAMA4-219ENST00000522006 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.73□□□□□ -0.21
LAMA4-219ENST00000522006 RALYLQ86SE5 291 aaKnown RBP13.73□□□□□ -0.21
LAMA4-219ENST00000522006 SYTL4Q96C24 671 aaPredicted RBP13.73□□□□□ -0.21
LAMA4-219ENST00000522006 HMOX1P09601 288 aa13.73□□□□□ -0.21
LAMA4-219ENST00000522006 RNF214Q8ND24 703 aa13.73□□□□□ -0.21
LAMA4-219ENST00000522006 WASHC4Q2M389 1173 aa13.72□□□□□ -0.21
LAMA4-219ENST00000522006 NEUROD6Q96NK8 337 aa13.72□□□□□ -0.21
LAMA4-219ENST00000522006 EPS15P42566 896 aa13.72□□□□□ -0.21
LAMA4-219ENST00000522006 CCDC27Q2M243 656 aa13.72□□□□□ -0.21
LAMA4-219ENST00000522006 KDM4AO75164 1064 aa13.72□□□□□ -0.21
LAMA4-219ENST00000522006 BRMS1Q9HCU9 246 aa13.72□□□□□ -0.21
LAMA4-219ENST00000522006 FYB1O15117 783 aa13.71□□□□□ -0.21
LAMA4-219ENST00000522006 LETM1O95202 739 aaPredicted RBP13.71□□□□□ -0.21
LAMA4-219ENST00000522006 CNTLNQ9NXG0 1405 aa13.71□□□□□ -0.21
LAMA4-219ENST00000522006 ODF2Q5BJF6 829 aa13.71□□□□□ -0.21
LAMA4-219ENST00000522006 TTLL5Q6EMB2 1281 aa13.71□□□□□ -0.21
LAMA4-219ENST00000522006 RIC3Q7Z5B4 369 aa13.71□□□□□ -0.21
LAMA4-219ENST00000522006 PSMA5P28066 241 aa13.71□□□□□ -0.22
LAMA4-219ENST00000522006 CNTROBQ8N137 903 aa13.7□□□□□ -0.22
LAMA4-219ENST00000522006 CCDC7Q96M83 1385 aa13.7□□□□□ -0.22
LAMA4-219ENST00000522006 AAMPQ13685 434 aa13.7□□□□□ -0.22
LAMA4-219ENST00000522006 CAVIN1Q6NZI2 390 aaKnown RBP13.7□□□□□ -0.22
LAMA4-219ENST00000522006 PSME1Q06323 249 aa13.7□□□□□ -0.22
LAMA4-219ENST00000522006 UBTFL1P0CB47 393 aaPredicted RBP13.7□□□□□ -0.22
LAMA4-219ENST00000522006 AIMP1Q12904 312 aaKnown RBP13.7□□□□□ -0.22
LAMA4-219ENST00000522006 HSP90AB2PQ58FF8 381 aa13.7□□□□□ -0.22
LAMA4-219ENST00000522006 TRAK2O60296 914 aa13.69□□□□□ -0.22
LAMA4-219ENST00000522006 TSPY26PQ9H489 355 aa13.69□□□□□ -0.22
LAMA4-219ENST00000522006 SAMD1Q6SPF0 538 aaPredicted RBP13.69□□□□□ -0.22
LAMA4-219ENST00000522006 SDF4Q9BRK5 362 aa13.69□□□□□ -0.22
LAMA4-219ENST00000522006 SMC2O95347 1197 aa13.69□□□□□ -0.22
LAMA4-219ENST00000522006 JPH4Q96JJ6 628 aa13.69□□□□□ -0.22
LAMA4-219ENST00000522006 KIF7Q2M1P5 1343 aa13.69□□□□□ -0.22
LAMA4-219ENST00000522006 TRIM5Q9C035 493 aa13.69□□□□□ -0.22
LAMA4-219ENST00000522006 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.68□□□□□ -0.22
LAMA4-219ENST00000522006 ERCC4Q92889 916 aaPredicted RBP13.68□□□□□ -0.22
LAMA4-219ENST00000522006 MAP7D2Q96T17 732 aa13.68□□□□□ -0.22
LAMA4-219ENST00000522006 CWC15Q9P013 229 aaKnown RBP13.68□□□□□ -0.22
LAMA4-219ENST00000522006 XBP1P17861 261 aa13.68□□□□□ -0.22
LAMA4-219ENST00000522006 CNKSR2Q8WXI2 1034 aa13.68□□□□□ -0.22
LAMA4-219ENST00000522006 FSD1Q9BTV5 496 aa13.68□□□□□ -0.22
LAMA4-219ENST00000522006 OFD1O75665 1012 aa13.67□□□□□ -0.22
LAMA4-219ENST00000522006 CCDC173Q0VFZ6 552 aa13.67□□□□□ -0.22
LAMA4-219ENST00000522006 MTERF4Q7Z6M4 381 aaKnown RBP13.67□□□□□ -0.22
LAMA4-219ENST00000522006 RBM33Q96EV2 1170 aaKnown RBP13.67□□□□□ -0.22
LAMA4-219ENST00000522006 ZFYVE27Q5T4F4 411 aa13.66□□□□□ -0.22
LAMA4-219ENST00000522006 MTMR7Q9Y216 660 aa13.66□□□□□ -0.22
LAMA4-219ENST00000522006 DCTN1Q14203 1278 aa13.66□□□□□ -0.22
LAMA4-219ENST00000522006 SKIDA1Q1XH10 827 aa13.66□□□□□ -0.22
LAMA4-219ENST00000522006 H0YHG0 523 aa13.66□□□□□ -0.22
LAMA4-219ENST00000522006 PRPF40AO75400 957 aaKnown RBP13.66□□□□□ -0.22
LAMA4-219ENST00000522006 CWC22Q9HCG8 908 aaKnown RBP13.65□□□□□ -0.22
LAMA4-219ENST00000522006 MIA2Q96PC5 1412 aa13.65□□□□□ -0.22
LAMA4-219ENST00000522006 GGNBP2Q9H3C7 697 aa13.65□□□□□ -0.23
LAMA4-219ENST00000522006 MBD3O95983 291 aa13.64□□□□□ -0.23
LAMA4-219ENST00000522006 CADPSQ9ULU8 1353 aa13.64□□□□□ -0.23
LAMA4-219ENST00000522006 CCP110O43303 1012 aa13.64□□□□□ -0.23
LAMA4-219ENST00000522006 KINO60870 393 aaKnown RBP13.64□□□□□ -0.23
LAMA4-219ENST00000522006 SMARCE1Q969G3 411 aa13.64□□□□□ -0.23
LAMA4-219ENST00000522006 DNAJC2Q99543 621 aaKnown RBP13.64□□□□□ -0.23
LAMA4-219ENST00000522006 MYO6Q9UM54 1294 aa13.64□□□□□ -0.23
LAMA4-219ENST00000522006 CCDC191Q8NCU4 936 aa13.63□□□□□ -0.23
LAMA4-219ENST00000522006 RAPGEF4Q8WZA2 1011 aa13.63□□□□□ -0.23
LAMA4-219ENST00000522006 BRD4O60885 1362 aaPredicted RBP13.63□□□□□ -0.23
LAMA4-219ENST00000522006 NEK4P51957 841 aa13.63□□□□□ -0.23
LAMA4-219ENST00000522006 CABP2Q9NPB3 220 aa13.63□□□□□ -0.23
LAMA4-219ENST00000522006 MAGEC2Q9UBF1 373 aaPredicted RBP13.63□□□□□ -0.23
LAMA4-219ENST00000522006 ADAMTS8Q9UP79 889 aa13.63□□□□□ -0.23
LAMA4-219ENST00000522006 FILIP1LQ4L180 1135 aa13.62□□□□□ -0.23
LAMA4-219ENST00000522006 SPC24Q8NBT2 197 aa13.62□□□□□ -0.23
LAMA4-219ENST00000522006 PDZRN3Q9UPQ7 1066 aa13.62□□□□□ -0.23
LAMA4-219ENST00000522006 RDXP35241 583 aaKnown RBP13.62□□□□□ -0.23
LAMA4-219ENST00000522006 SART3Q15020 963 aaKnown RBP13.62□□□□□ -0.23
LAMA4-219ENST00000522006 BRPF3Q9ULD4 1205 aa13.62□□□□□ -0.23
LAMA4-219ENST00000522006 CCDC66A2RUB6 948 aa13.62□□□□□ -0.23
LAMA4-219ENST00000522006 BRPF1P55201 1214 aaPredicted RBP13.62□□□□□ -0.23
LAMA4-219ENST00000522006 FMNL2Q96PY5 1086 aa13.62□□□□□ -0.23
LAMA4-219ENST00000522006 RUSC2Q8N2Y8 1516 aa13.62□□□□□ -0.23
LAMA4-219ENST00000522006 RBM10P98175 930 aaKnown RBP13.62□□□□□ -0.23
LAMA4-219ENST00000522006 ZNF396Q96N95 335 aaPredicted RBP13.61□□□□□ -0.23
LAMA4-219ENST00000522006 CUX1P39880 1505 aa13.61□□□□□ -0.23
LAMA4-219ENST00000522006 CEBPZQ03701 1054 aaKnown RBP13.61□□□□□ -0.23
LAMA4-219ENST00000522006 C1orf115Q9H7X2 142 aa13.61□□□□□ -0.23
LAMA4-219ENST00000522006 SURF6O75683 361 aaKnown RBP13.61□□□□□ -0.23
LAMA4-219ENST00000522006 RABEP1Q15276 862 aa13.61□□□□□ -0.23
LAMA4-219ENST00000522006 CLASRPQ8N2M8 674 aaKnown RBP13.61□□□□□ -0.23
LAMA4-219ENST00000522006 MYOM3Q5VTT5 1437 aa13.61□□□□□ -0.23
LAMA4-219ENST00000522006 FIBPO43427 364 aa13.61□□□□□ -0.23
LAMA4-219ENST00000522006 CCDC30Q5VVM6 783 aa13.61□□□□□ -0.23
LAMA4-219ENST00000522006 ATP2B1P20020 1258 aa13.6□□□□□ -0.23
LAMA4-219ENST00000522006 MCM2P49736 904 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms