RNA–Protein interactions for RNA: ENST00000521723.1

PDGFRB-209, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 5

Gene PDGFRB, Length 400 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-209ENST00000521723 CLSPNQ9HAW4 1339 aa15.66■□□□□ 0.1
PDGFRB-209ENST00000521723 PRAM1Q96QH2 718 aa15.64■□□□□ 0.09
PDGFRB-209ENST00000521723 TRAK1Q9UPV9 953 aa15.64■□□□□ 0.09
PDGFRB-209ENST00000521723 TRPM1Q7Z4N2 1603 aa15.63■□□□□ 0.09
PDGFRB-209ENST00000521723 ARHGEF28Q8N1W1 1705 aaKnown RBP15.63■□□□□ 0.09
PDGFRB-209ENST00000521723 NBPF1Q3BBV0 1214 aa15.62■□□□□ 0.09
PDGFRB-209ENST00000521723 POGKQ9P215 609 aa15.62■□□□□ 0.09
PDGFRB-209ENST00000521723 C1orf167Q5SNV9 1468 aa15.62■□□□□ 0.09
PDGFRB-209ENST00000521723 BRINP3Q76B58 766 aa15.61■□□□□ 0.09
PDGFRB-209ENST00000521723 ADGRB2O60241 1585 aa15.6■□□□□ 0.09
PDGFRB-209ENST00000521723 AHDC1Q5TGY3 1603 aaPredicted RBP15.6■□□□□ 0.09
PDGFRB-209ENST00000521723 SAFB2Q14151 953 aaKnown RBP eCLIP15.59■□□□□ 0.09
PDGFRB-209ENST00000521723 NBPF8Q3BBV2 869 aa15.59■□□□□ 0.09
PDGFRB-209ENST00000521723 FMN2Q9NZ56 1722 aa15.59■□□□□ 0.09
PDGFRB-209ENST00000521723 PHLPP1O60346 1717 aa15.58■□□□□ 0.08
PDGFRB-209ENST00000521723 ROCK2O75116 1388 aaKnown RBP15.58■□□□□ 0.08
PDGFRB-209ENST00000521723 GPRASP1Q5JY77 1395 aa15.57■□□□□ 0.08
PDGFRB-209ENST00000521723 CCER1Q8TC90 406 aaPredicted RBP15.56■□□□□ 0.08
PDGFRB-209ENST00000521723 RALGAPBQ86X10 1494 aa15.56■□□□□ 0.08
PDGFRB-209ENST00000521723 COL16A1Q07092 1604 aaPredicted RBP15.56■□□□□ 0.08
PDGFRB-209ENST00000521723 NHSL1Q5SYE7 1610 aa15.56■□□□□ 0.08
PDGFRB-209ENST00000521723 MINK1Q8N4C8 1332 aaPredicted RBP15.55■□□□□ 0.08
PDGFRB-209ENST00000521723 TIMELESSQ9UNS1 1208 aa15.55■□□□□ 0.08
PDGFRB-209ENST00000521723 ORAI2Q96SN7 254 aa15.54■□□□□ 0.08
PDGFRB-209ENST00000521723 ANKARQ7Z5J8 1434 aa15.53■□□□□ 0.08
PDGFRB-209ENST00000521723 EIF3AQ14152 1382 aaKnown RBP15.53■□□□□ 0.08
PDGFRB-209ENST00000521723 HIRIP3Q9BW71 556 aaPredicted RBP15.53■□□□□ 0.08
PDGFRB-209ENST00000521723 CENPJQ9HC77 1338 aaPredicted RBP15.52■□□□□ 0.08
PDGFRB-209ENST00000521723 NUTM2FA1L443 756 aa15.52■□□□□ 0.08
PDGFRB-209ENST00000521723 ESCO1Q5FWF5 840 aa15.52■□□□□ 0.08
PDGFRB-209ENST00000521723 WASLO00401 505 aaPredicted RBP15.51■□□□□ 0.07
PDGFRB-209ENST00000521723 TULP4Q9NRJ4 1543 aa15.51■□□□□ 0.07
PDGFRB-209ENST00000521723 KIF1AQ12756 1690 aa15.51■□□□□ 0.07
PDGFRB-209ENST00000521723 USP32Q8NFA0 1604 aa15.5■□□□□ 0.07
PDGFRB-209ENST00000521723 JCADQ9P266 1359 aa15.5■□□□□ 0.07
PDGFRB-209ENST00000521723 QRICH2Q9H0J4 1663 aa15.5■□□□□ 0.07
PDGFRB-209ENST00000521723 DDX17Q92841 729 aaKnown RBP15.49■□□□□ 0.07
PDGFRB-209ENST00000521723 CARD11Q9BXL7 1154 aa15.49■□□□□ 0.07
PDGFRB-209ENST00000521723 RGPD8O14715 1765 aaPredicted RBP15.49■□□□□ 0.07
PDGFRB-209ENST00000521723 NPHP3Q7Z494 1330 aa15.48■□□□□ 0.07
PDGFRB-209ENST00000521723 MED1Q15648 1581 aaPredicted RBP15.48■□□□□ 0.07
PDGFRB-209ENST00000521723 SHPRHQ149N8 1683 aa15.48■□□□□ 0.07
PDGFRB-209ENST00000521723 SOS2Q07890 1332 aaPredicted RBP15.47■□□□□ 0.07
PDGFRB-209ENST00000521723 ATP7BP35670 1465 aa15.46■□□□□ 0.07
PDGFRB-209ENST00000521723 PXDNQ92626 1479 aa15.46■□□□□ 0.07
PDGFRB-209ENST00000521723 PRR36Q9H6K5 1346 aa15.46■□□□□ 0.07
PDGFRB-209ENST00000521723 LRRC59Q96AG4 307 aaKnown RBP15.46■□□□□ 0.07
PDGFRB-209ENST00000521723 CDK19Q9BWU1 502 aa15.46■□□□□ 0.07
PDGFRB-209ENST00000521723 PHF8Q9UPP1 1060 aa15.46■□□□□ 0.07
PDGFRB-209ENST00000521723 FOXO3O43524 673 aa15.45■□□□□ 0.06
PDGFRB-209ENST00000521723 ITSN1Q15811 1721 aa15.44■□□□□ 0.06
PDGFRB-209ENST00000521723 SBNO2Q9Y2G9 1366 aa15.44■□□□□ 0.06
PDGFRB-209ENST00000521723 SPATA31A6Q5VVP1 1343 aa15.43■□□□□ 0.06
PDGFRB-209ENST00000521723 NUDT16Q96DE0 195 aaKnown RBP15.43■□□□□ 0.06
PDGFRB-209ENST00000521723 PNPLA6Q8IY17 1366 aa15.43■□□□□ 0.06
PDGFRB-209ENST00000521723 TOPAZ1Q8N9V7 1692 aa15.43■□□□□ 0.06
PDGFRB-209ENST00000521723 EVC2Q86UK5 1308 aa15.42■□□□□ 0.06
PDGFRB-209ENST00000521723 XPCQ01831 940 aaPredicted RBP15.41■□□□□ 0.06
PDGFRB-209ENST00000521723 PMFBP1Q8TBY8 1022 aa15.41■□□□□ 0.06
PDGFRB-209ENST00000521723 DISP3Q9P2K9 1392 aa15.4■□□□□ 0.06
PDGFRB-209ENST00000521723 SRPK2P78362 688 aaKnown RBP15.4■□□□□ 0.06
PDGFRB-209ENST00000521723 KRT28Q7Z3Y7 464 aa15.4■□□□□ 0.06
PDGFRB-209ENST00000521723 CCDC61Q9Y6R9 512 aa15.4■□□□□ 0.06
PDGFRB-209ENST00000521723 PSME1Q06323 249 aa15.39■□□□□ 0.05
PDGFRB-209ENST00000521723 CABP2Q9NPB3 220 aa15.39■□□□□ 0.05
PDGFRB-209ENST00000521723 LRP6O75581 1613 aa15.39■□□□□ 0.05
PDGFRB-209ENST00000521723 COL22A1Q8NFW1 1626 aaPredicted RBP15.39■□□□□ 0.05
PDGFRB-209ENST00000521723 SBNO1A3KN83 1393 aa15.38■□□□□ 0.05
PDGFRB-209ENST00000521723 SPATA31A3Q5VYP0 1347 aa15.38■□□□□ 0.05
PDGFRB-209ENST00000521723 USP47Q96K76 1375 aa15.37■□□□□ 0.05
PDGFRB-209ENST00000521723 TNS3Q68CZ2 1445 aa15.37■□□□□ 0.05
PDGFRB-209ENST00000521723 PLEKHG3A1L390 1219 aa15.37■□□□□ 0.05
PDGFRB-209ENST00000521723 NGDNQ8NEJ9 315 aaKnown RBP15.37■□□□□ 0.05
PDGFRB-209ENST00000521723 POLR3AO14802 1390 aaPredicted RBP15.36■□□□□ 0.05
PDGFRB-209ENST00000521723 PPIP5K1Q6PFW1 1433 aa15.36■□□□□ 0.05
PDGFRB-209ENST00000521723 TRPM3Q9HCF6 1732 aaPredicted RBP15.36■□□□□ 0.05
PDGFRB-209ENST00000521723 ST20-MTHFSA0A0A6YYL1 179 aa15.35■□□□□ 0.05
PDGFRB-209ENST00000521723 PHF23Q9BUL5 403 aaPredicted RBP15.35■□□□□ 0.05
PDGFRB-209ENST00000521723 ATAD2Q6PL18 1390 aa15.35■□□□□ 0.05
PDGFRB-209ENST00000521723 NUTM2BA6NNL0 878 aaPredicted RBP15.34■□□□□ 0.05
PDGFRB-209ENST00000521723 NUTM2EB1AL46 878 aaPredicted RBP15.34■□□□□ 0.05
PDGFRB-209ENST00000521723 NUTM2AQ8IVF1 878 aaPredicted RBP15.34■□□□□ 0.05
PDGFRB-209ENST00000521723 TESK2Q96S53 571 aa15.34■□□□□ 0.05
PDGFRB-209ENST00000521723 ACEP12821 1306 aa15.34■□□□□ 0.05
PDGFRB-209ENST00000521723 ARHGEF10O15013 1369 aa15.34■□□□□ 0.05
PDGFRB-209ENST00000521723 SLC24A1O60721 1099 aa15.33■□□□□ 0.04
PDGFRB-209ENST00000521723 ALS2Q96Q42 1657 aa15.32■□□□□ 0.04
PDGFRB-209ENST00000521723 MEX3CQ5U5Q3 659 aaKnown RBP15.32■□□□□ 0.04
PDGFRB-209ENST00000521723 CABP1Q9NZU7 370 aa15.32■□□□□ 0.04
PDGFRB-209ENST00000521723 PUS7Q96PZ0 661 aaKnown RBP15.31■□□□□ 0.04
PDGFRB-209ENST00000521723 BRD4O60885 1362 aaPredicted RBP15.3■□□□□ 0.04
PDGFRB-209ENST00000521723 LMOD2Q6P5Q4 547 aa15.29■□□□□ 0.04
PDGFRB-209ENST00000521723 RGS17Q9UGC6 210 aaPredicted RBP15.29■□□□□ 0.04
PDGFRB-209ENST00000521723 USP6P35125 1406 aa15.28■□□□□ 0.04
PDGFRB-209ENST00000521723 PAK3O75914 559 aaPredicted RBP15.28■□□□□ 0.04
PDGFRB-209ENST00000521723 ABCA3Q99758 1704 aa15.28■□□□□ 0.04
PDGFRB-209ENST00000521723 AKAP12Q02952 1782 aa15.27■□□□□ 0.04
PDGFRB-209ENST00000521723 ADAMTS2O95450 1211 aa15.27■□□□□ 0.04
PDGFRB-209ENST00000521723 TMF1P82094 1093 aa15.27■□□□□ 0.04
PDGFRB-209ENST00000521723 CPSF1Q10570 1443 aaKnown RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms