RNA–Protein interactions for RNA: ENST00000521605.1

MRPS28-208, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2 BASIC

Gene MRPS28, Length 437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-208ENST00000521605 BCL9LQ86UU0 1499 aa16.15■□□□□ 0.18
MRPS28-208ENST00000521605 GJD4Q96KN9 370 aaPredicted RBP16.14■□□□□ 0.17
MRPS28-208ENST00000521605 LRP5O75197 1615 aa16.14■□□□□ 0.17
MRPS28-208ENST00000521605 LAMC1P11047 1609 aa16.14■□□□□ 0.17
MRPS28-208ENST00000521605 COL22A1Q8NFW1 1626 aaPredicted RBP16.12■□□□□ 0.17
MRPS28-208ENST00000521605 PSDA5PKW4 1024 aaPredicted RBP16.12■□□□□ 0.17
MRPS28-208ENST00000521605 SF3B2Q13435 895 aaKnown RBP16.12■□□□□ 0.17
MRPS28-208ENST00000521605 IQGAP3Q86VI3 1631 aa16.1■□□□□ 0.17
MRPS28-208ENST00000521605 MYOM2P54296 1465 aa16.1■□□□□ 0.17
MRPS28-208ENST00000521605 MARF1Q9Y4F3 1742 aaKnown RBP16.09■□□□□ 0.17
MRPS28-208ENST00000521605 XPCQ01831 940 aaPredicted RBP16.09■□□□□ 0.17
MRPS28-208ENST00000521605 GLI3P10071 1580 aa16.09■□□□□ 0.17
MRPS28-208ENST00000521605 RALGAPBQ86X10 1494 aa16.08■□□□□ 0.16
MRPS28-208ENST00000521605 BRWD3Q6RI45 1802 aa16.07■□□□□ 0.16
MRPS28-208ENST00000521605 NUP155O75694 1391 aa16.05■□□□□ 0.16
MRPS28-208ENST00000521605 ROBO2Q9HCK4 1378 aa16.05■□□□□ 0.16
MRPS28-208ENST00000521605 ESCO1Q5FWF5 840 aa16.05■□□□□ 0.16
MRPS28-208ENST00000521605 NPHP3Q7Z494 1330 aa16.04■□□□□ 0.16
MRPS28-208ENST00000521605 CLSPNQ9HAW4 1339 aa16.04■□□□□ 0.16
MRPS28-208ENST00000521605 UNC5CLQ8IV45 518 aa16.04■□□□□ 0.16
MRPS28-208ENST00000521605 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.04■□□□□ 0.16
MRPS28-208ENST00000521605 SEPT12Q8IYM1 358 aa16.03■□□□□ 0.16
MRPS28-208ENST00000521605 PXDNQ92626 1479 aa16.03■□□□□ 0.16
MRPS28-208ENST00000521605 SPHKAPQ2M3C7 1700 aa16.02■□□□□ 0.16
MRPS28-208ENST00000521605 FOXO3O43524 673 aa16.02■□□□□ 0.16
MRPS28-208ENST00000521605 NEXMIFQ5QGS0 1516 aa16.02■□□□□ 0.15
MRPS28-208ENST00000521605 CCDC9Q9Y3X0 531 aaKnown RBP16.01■□□□□ 0.15
MRPS28-208ENST00000521605 SLIT2O94813 1529 aa16■□□□□ 0.15
MRPS28-208ENST00000521605 PLEKHG5O94827 1062 aa16■□□□□ 0.15
MRPS28-208ENST00000521605 A0A0G2JS52 829 aa15.99■□□□□ 0.15
MRPS28-208ENST00000521605 NUTM2FA1L443 756 aa15.99■□□□□ 0.15
MRPS28-208ENST00000521605 BAG6P46379 1132 aa15.99■□□□□ 0.15
MRPS28-208ENST00000521605 MYT1Q01538 1121 aa15.99■□□□□ 0.15
MRPS28-208ENST00000521605 KRT27Q7Z3Y8 459 aa15.99■□□□□ 0.15
MRPS28-208ENST00000521605 CLTCL1P53675 1640 aa15.97■□□□□ 0.15
MRPS28-208ENST00000521605 CCER1Q8TC90 406 aaPredicted RBP15.97■□□□□ 0.15
MRPS28-208ENST00000521605 HAP1P54257 671 aaPredicted RBP15.96■□□□□ 0.15
MRPS28-208ENST00000521605 R3HDM1Q15032 1099 aaKnown RBP15.96■□□□□ 0.15
MRPS28-208ENST00000521605 HFM1A2PYH4 1435 aa15.95■□□□□ 0.14
MRPS28-208ENST00000521605 USP32Q8NFA0 1604 aa15.95■□□□□ 0.14
MRPS28-208ENST00000521605 YY1P25490 414 aa15.95■□□□□ 0.14
MRPS28-208ENST00000521605 LRPPRCP42704 1394 aaKnown RBP15.95■□□□□ 0.14
MRPS28-208ENST00000521605 CDC42BPGQ6DT37 1551 aa15.95■□□□□ 0.14
MRPS28-208ENST00000521605 ITGAEP38570 1179 aa15.94■□□□□ 0.14
MRPS28-208ENST00000521605 EN1Q05925 392 aaPredicted RBP15.94■□□□□ 0.14
MRPS28-208ENST00000521605 VPS72Q15906 364 aa15.94■□□□□ 0.14
MRPS28-208ENST00000521605 ACIN1Q9UKV3 1341 aaKnown RBP15.93■□□□□ 0.14
MRPS28-208ENST00000521605 ROCK1Q13464 1354 aa15.92■□□□□ 0.14
MRPS28-208ENST00000521605 CABLES1Q8TDN4 633 aa15.92■□□□□ 0.14
MRPS28-208ENST00000521605 PLCH1Q4KWH8 1693 aa15.92■□□□□ 0.14
MRPS28-208ENST00000521605 SPATA31A3Q5VYP0 1347 aa15.92■□□□□ 0.14
MRPS28-208ENST00000521605 KIF1BO60333 1816 aa15.91■□□□□ 0.14
MRPS28-208ENST00000521605 VGFO15240 615 aaPredicted RBP15.91■□□□□ 0.14
MRPS28-208ENST00000521605 FAM182BQ5T319 152 aa15.9■□□□□ 0.14
MRPS28-208ENST00000521605 NAIPQ13075 1403 aa15.9■□□□□ 0.14
MRPS28-208ENST00000521605 PRAG1Q86YV5 1406 aa15.89■□□□□ 0.13
MRPS28-208ENST00000521605 ONECUT3O60422 494 aaPredicted RBP15.89■□□□□ 0.13
MRPS28-208ENST00000521605 FAM98CQ17RN3 349 aaKnown RBP15.89■□□□□ 0.13
MRPS28-208ENST00000521605 LMOD2Q6P5Q4 547 aa15.88■□□□□ 0.13
MRPS28-208ENST00000521605 KRT28Q7Z3Y7 464 aa15.88■□□□□ 0.13
MRPS28-208ENST00000521605 CCDC144AA2RUR9 1427 aa15.87■□□□□ 0.13
MRPS28-208ENST00000521605 WAPLQ7Z5K2 1190 aa15.87■□□□□ 0.13
MRPS28-208ENST00000521605 STK26Q9P289 416 aa15.87■□□□□ 0.13
MRPS28-208ENST00000521605 RGPD1P0DJD0 1748 aa15.87■□□□□ 0.13
MRPS28-208ENST00000521605 NWD2Q9ULI1 1742 aa15.87■□□□□ 0.13
MRPS28-208ENST00000521605 DHX57Q6P158 1386 aaKnown RBP15.86■□□□□ 0.13
MRPS28-208ENST00000521605 EZH2Q15910 746 aaKnown RBP15.85■□□□□ 0.13
MRPS28-208ENST00000521605 KIF1AQ12756 1690 aa15.85■□□□□ 0.13
MRPS28-208ENST00000521605 RAB3GAP2Q9H2M9 1393 aa15.84■□□□□ 0.13
MRPS28-208ENST00000521605 TNS3Q68CZ2 1445 aa15.84■□□□□ 0.13
MRPS28-208ENST00000521605 ABCA3Q99758 1704 aa15.82■□□□□ 0.12
MRPS28-208ENST00000521605 FMN2Q9NZ56 1722 aa15.82■□□□□ 0.12
MRPS28-208ENST00000521605 FAM83GA6ND36 823 aa15.82■□□□□ 0.12
MRPS28-208ENST00000521605 PLEKHH1Q9ULM0 1364 aa15.82■□□□□ 0.12
MRPS28-208ENST00000521605 TNS1Q9HBL0 1735 aaKnown RBP15.82■□□□□ 0.12
MRPS28-208ENST00000521605 PPLO60437 1756 aa15.81■□□□□ 0.12
MRPS28-208ENST00000521605 BTG4Q9NY30 223 aa15.81■□□□□ 0.12
MRPS28-208ENST00000521605 NRAPQ86VF7 1730 aa15.8■□□□□ 0.12
MRPS28-208ENST00000521605 PSME1Q06323 249 aa15.8■□□□□ 0.12
MRPS28-208ENST00000521605 RPGRIP1LQ68CZ1 1315 aa15.79■□□□□ 0.12
MRPS28-208ENST00000521605 PHF8Q9UPP1 1060 aa15.79■□□□□ 0.12
MRPS28-208ENST00000521605 DISP2A7MBM2 1401 aa15.78■□□□□ 0.12
MRPS28-208ENST00000521605 RGPD8O14715 1765 aaPredicted RBP15.78■□□□□ 0.12
MRPS28-208ENST00000521605 PPP1R1BQ9UD71 204 aaPredicted RBP15.78■□□□□ 0.12
MRPS28-208ENST00000521605 TRIM37O94972 964 aa15.77■□□□□ 0.12
MRPS28-208ENST00000521605 TMEM132EQ6IEE7 984 aa15.77■□□□□ 0.12
MRPS28-208ENST00000521605 ARHGEF10O15013 1369 aa15.76■□□□□ 0.11
MRPS28-208ENST00000521605 ADGRB2O60241 1585 aa15.76■□□□□ 0.11
MRPS28-208ENST00000521605 DCAF8L1A6NGE4 600 aa15.76■□□□□ 0.11
MRPS28-208ENST00000521605 CAMKK2Q96RR4 588 aa15.76■□□□□ 0.11
MRPS28-208ENST00000521605 TECPR2O15040 1411 aa15.76■□□□□ 0.11
MRPS28-208ENST00000521605 ADGRF5Q8IZF2 1346 aa15.75■□□□□ 0.11
MRPS28-208ENST00000521605 IFT172Q9UG01 1749 aa15.75■□□□□ 0.11
MRPS28-208ENST00000521605 APBA3O96018 575 aa15.75■□□□□ 0.11
MRPS28-208ENST00000521605 SBNO1A3KN83 1393 aa15.75■□□□□ 0.11
MRPS28-208ENST00000521605 SPATA31A5Q5VU36 1347 aa15.73■□□□□ 0.11
MRPS28-208ENST00000521605 SPATA31A7Q8IWB4 1347 aa15.73■□□□□ 0.11
MRPS28-208ENST00000521605 KNDC1Q76NI1 1749 aa15.73■□□□□ 0.11
MRPS28-208ENST00000521605 THSD7AQ9UPZ6 1657 aa15.73■□□□□ 0.11
MRPS28-208ENST00000521605 COL14A1Q05707 1796 aaKnown RBP15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms