RNA–Protein interactions for RNA: ENST00000521569.1

SPARC-204, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 602 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-204ENST00000521569 NALCNQ8IZF0 1738 aa12.85□□□□□ -0.35
SPARC-204ENST00000521569 MYOM2P54296 1465 aa12.85□□□□□ -0.35
SPARC-204ENST00000521569 ANKRD30BQ9BXX2 1392 aa12.84□□□□□ -0.35
SPARC-204ENST00000521569 CCDC125Q86Z20 511 aa12.84□□□□□ -0.35
SPARC-204ENST00000521569 USP21Q9UK80 565 aa12.84□□□□□ -0.35
SPARC-204ENST00000521569 ATRNO75882 1429 aa12.84□□□□□ -0.35
SPARC-204ENST00000521569 LRPPRCP42704 1394 aaKnown RBP12.83□□□□□ -0.36
SPARC-204ENST00000521569 ATAD2Q6PL18 1390 aa12.83□□□□□ -0.36
SPARC-204ENST00000521569 SPATA31E1Q6ZUB1 1445 aa12.82□□□□□ -0.36
SPARC-204ENST00000521569 COL22A1Q8NFW1 1626 aaPredicted RBP12.82□□□□□ -0.36
SPARC-204ENST00000521569 ADAMTS2O95450 1211 aa12.82□□□□□ -0.36
SPARC-204ENST00000521569 BCL9LQ86UU0 1499 aa12.82□□□□□ -0.36
SPARC-204ENST00000521569 CDC42BPGQ6DT37 1551 aa12.81□□□□□ -0.36
SPARC-204ENST00000521569 PXDNQ92626 1479 aa12.81□□□□□ -0.36
SPARC-204ENST00000521569 FOXD1Q16676 465 aa12.81□□□□□ -0.36
SPARC-204ENST00000521569 KIF1BO60333 1816 aa12.81□□□□□ -0.36
SPARC-204ENST00000521569 ESCO1Q5FWF5 840 aa12.8□□□□□ -0.36
SPARC-204ENST00000521569 PPARGC1BQ86YN6 1023 aaKnown RBP12.8□□□□□ -0.36
SPARC-204ENST00000521569 ADGRF5Q8IZF2 1346 aa12.8□□□□□ -0.36
SPARC-204ENST00000521569 CCDC144AA2RUR9 1427 aa12.79□□□□□ -0.36
SPARC-204ENST00000521569 FOXO3O43524 673 aa12.78□□□□□ -0.36
SPARC-204ENST00000521569 PIK3C2GO75747 1445 aa12.78□□□□□ -0.36
SPARC-204ENST00000521569 EP400Q96L91 3159 aa12.77□□□□□ -0.37
SPARC-204ENST00000521569 GJD4Q96KN9 370 aaPredicted RBP12.77□□□□□ -0.37
SPARC-204ENST00000521569 SPATA31A3Q5VYP0 1347 aa12.77□□□□□ -0.37
SPARC-204ENST00000521569 UNC5CLQ8IV45 518 aa12.76□□□□□ -0.37
SPARC-204ENST00000521569 MPHOSPH9Q99550 1183 aa12.76□□□□□ -0.37
SPARC-204ENST00000521569 C14orf93Q9H972 538 aaKnown RBP12.76□□□□□ -0.37
SPARC-204ENST00000521569 PPLO60437 1756 aa12.76□□□□□ -0.37
SPARC-204ENST00000521569 ONECUT3O60422 494 aaPredicted RBP12.75□□□□□ -0.37
SPARC-204ENST00000521569 SLIT2O94813 1529 aa12.75□□□□□ -0.37
SPARC-204ENST00000521569 WAPLQ7Z5K2 1190 aa12.75□□□□□ -0.37
SPARC-204ENST00000521569 NRXN1Q9ULB1 1477 aa12.74□□□□□ -0.37
SPARC-204ENST00000521569 YTHDC2Q9H6S0 1430 aaKnown RBP12.74□□□□□ -0.37
SPARC-204ENST00000521569 SBNO1A3KN83 1393 aa12.73□□□□□ -0.37
SPARC-204ENST00000521569 ZRANB1Q9UGI0 708 aa12.73□□□□□ -0.37
SPARC-204ENST00000521569 PLEKHH1Q9ULM0 1364 aa12.72□□□□□ -0.37
SPARC-204ENST00000521569 PSME1Q06323 249 aa12.72□□□□□ -0.37
SPARC-204ENST00000521569 RGL3Q3MIN7 710 aa12.72□□□□□ -0.37
SPARC-204ENST00000521569 TMEM132EQ6IEE7 984 aa12.71□□□□□ -0.37
SPARC-204ENST00000521569 STK26Q9P289 416 aa12.71□□□□□ -0.37
SPARC-204ENST00000521569 VPS72Q15906 364 aa12.7□□□□□ -0.38
SPARC-204ENST00000521569 KRT28Q7Z3Y7 464 aa12.7□□□□□ -0.38
SPARC-204ENST00000521569 STAC3Q96MF2 364 aa12.7□□□□□ -0.38
SPARC-204ENST00000521569 RALGAPBQ86X10 1494 aa12.7□□□□□ -0.38
SPARC-204ENST00000521569 DHX57Q6P158 1386 aaKnown RBP12.69□□□□□ -0.38
SPARC-204ENST00000521569 XPCQ01831 940 aaPredicted RBP12.69□□□□□ -0.38
SPARC-204ENST00000521569 PHF8Q9UPP1 1060 aa12.69□□□□□ -0.38
SPARC-204ENST00000521569 BLMP54132 1417 aaPredicted RBP12.69□□□□□ -0.38
SPARC-204ENST00000521569 TNS3Q68CZ2 1445 aa12.69□□□□□ -0.38
SPARC-204ENST00000521569 ARHGEF10O15013 1369 aa12.69□□□□□ -0.38
SPARC-204ENST00000521569 KNDC1Q76NI1 1749 aa12.68□□□□□ -0.38
SPARC-204ENST00000521569 ANKARQ7Z5J8 1434 aa12.68□□□□□ -0.38
SPARC-204ENST00000521569 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.68□□□□□ -0.38
SPARC-204ENST00000521569 KIF1AQ12756 1690 aa12.67□□□□□ -0.38
SPARC-204ENST00000521569 DLC1Q96QB1 1528 aa12.67□□□□□ -0.38
SPARC-204ENST00000521569 IFT172Q9UG01 1749 aa12.65□□□□□ -0.38
SPARC-204ENST00000521569 NUTM2FA1L443 756 aa12.65□□□□□ -0.38
SPARC-204ENST00000521569 CFAP70Q5T0N1 1121 aa12.65□□□□□ -0.38
SPARC-204ENST00000521569 SEPT12Q8IYM1 358 aa12.65□□□□□ -0.38
SPARC-204ENST00000521569 FMN2Q9NZ56 1722 aa12.65□□□□□ -0.38
SPARC-204ENST00000521569 GLI3P10071 1580 aa12.64□□□□□ -0.39
SPARC-204ENST00000521569 PRAM1Q96QH2 718 aa12.64□□□□□ -0.39
SPARC-204ENST00000521569 MARF1Q9Y4F3 1742 aaKnown RBP12.64□□□□□ -0.39
SPARC-204ENST00000521569 USP32Q8NFA0 1604 aa12.63□□□□□ -0.39
SPARC-204ENST00000521569 FAM83GA6ND36 823 aa12.63□□□□□ -0.39
SPARC-204ENST00000521569 EIF3AQ14152 1382 aaKnown RBP12.62□□□□□ -0.39
SPARC-204ENST00000521569 HRCP23327 699 aa12.62□□□□□ -0.39
SPARC-204ENST00000521569 KRT27Q7Z3Y8 459 aa12.61□□□□□ -0.39
SPARC-204ENST00000521569 ADGRB1O14514 1584 aa12.6□□□□□ -0.39
SPARC-204ENST00000521569 ADGRB2O60241 1585 aa12.6□□□□□ -0.39
SPARC-204ENST00000521569 POGKQ9P215 609 aa12.6□□□□□ -0.39
SPARC-204ENST00000521569 SF3B2Q13435 895 aaKnown RBP12.59□□□□□ -0.39
SPARC-204ENST00000521569 CABLES1Q8TDN4 633 aa12.59□□□□□ -0.39
SPARC-204ENST00000521569 NWD2Q9ULI1 1742 aa12.59□□□□□ -0.39
SPARC-204ENST00000521569 GPRASP1Q5JY77 1395 aa12.58□□□□□ -0.4
SPARC-204ENST00000521569 WASLO00401 505 aaPredicted RBP12.58□□□□□ -0.4
SPARC-204ENST00000521569 HAP1P54257 671 aaPredicted RBP12.58□□□□□ -0.4
SPARC-204ENST00000521569 DISP2A7MBM2 1401 aa12.56□□□□□ -0.4
SPARC-204ENST00000521569 DEFB132Q7Z7B7 95 aa12.56□□□□□ -0.4
SPARC-204ENST00000521569 PMFBP1Q8TBY8 1022 aa12.56□□□□□ -0.4
SPARC-204ENST00000521569 BTG4Q9NY30 223 aa12.56□□□□□ -0.4
SPARC-204ENST00000521569 SPATA31A5Q5VU36 1347 aa12.56□□□□□ -0.4
SPARC-204ENST00000521569 SPATA31A7Q8IWB4 1347 aa12.56□□□□□ -0.4
SPARC-204ENST00000521569 PRR36Q9H6K5 1346 aa12.56□□□□□ -0.4
SPARC-204ENST00000521569 BAG6P46379 1132 aa12.55□□□□□ -0.4
SPARC-204ENST00000521569 SAFB2Q14151 953 aaKnown RBP eCLIP12.55□□□□□ -0.4
SPARC-204ENST00000521569 TULP4Q9NRJ4 1543 aa12.55□□□□□ -0.4
SPARC-204ENST00000521569 RAB3GAP2Q9H2M9 1393 aa12.55□□□□□ -0.4
SPARC-204ENST00000521569 LMOD2Q6P5Q4 547 aa12.54□□□□□ -0.4
SPARC-204ENST00000521569 TRAK1Q9UPV9 953 aa12.54□□□□□ -0.4
SPARC-204ENST00000521569 FAM98CQ17RN3 349 aaKnown RBP12.53□□□□□ -0.4
SPARC-204ENST00000521569 TRPM3Q9HCF6 1732 aaPredicted RBP12.52□□□□□ -0.41
SPARC-204ENST00000521569 HIRIP3Q9BW71 556 aaPredicted RBP12.52□□□□□ -0.41
SPARC-204ENST00000521569 CCDC9Q9Y3X0 531 aaKnown RBP12.52□□□□□ -0.41
SPARC-204ENST00000521569 POLR3AO14802 1390 aaPredicted RBP12.52□□□□□ -0.41
SPARC-204ENST00000521569 PLEKHG3A1L390 1219 aa12.51□□□□□ -0.41
SPARC-204ENST00000521569 NGDNQ8NEJ9 315 aaKnown RBP12.51□□□□□ -0.41
SPARC-204ENST00000521569 DCAF11Q8TEB1 546 aa12.51□□□□□ -0.41
SPARC-204ENST00000521569 LRP5O75197 1615 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms