RNA–Protein interactions for RNA: ENST00000521545.6

LAPTM4B-203, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAPTM4B, Length 915 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-203ENST00000521545 TECPR2O15040 1411 aa38.12■■■■□ 3.69
LAPTM4B-203ENST00000521545 C14orf93Q9H972 538 aaKnown RBP38.11■■■■□ 3.69
LAPTM4B-203ENST00000521545 YTHDC2Q9H6S0 1430 aaKnown RBP38.07■■■■□ 3.69
LAPTM4B-203ENST00000521545 ZNF772Q68DY9 489 aaPredicted RBP38.06■■■■□ 3.68
LAPTM4B-203ENST00000521545 MYOM2P54296 1465 aa38.06■■■■□ 3.68
LAPTM4B-203ENST00000521545 CFAP70Q5T0N1 1121 aa38.05■■■■□ 3.68
LAPTM4B-203ENST00000521545 CDC42BPGQ6DT37 1551 aa38.04■■■■□ 3.68
LAPTM4B-203ENST00000521545 DHX57Q6P158 1386 aaKnown RBP38.04■■■■□ 3.68
LAPTM4B-203ENST00000521545 NRXN1Q9ULB1 1477 aa38.03■■■■□ 3.68
LAPTM4B-203ENST00000521545 ESCO1Q5FWF5 840 aa38.03■■■■□ 3.68
LAPTM4B-203ENST00000521545 KNDC1Q76NI1 1749 aa38.02■■■■□ 3.68
LAPTM4B-203ENST00000521545 SIRT1Q96EB6 747 aa38.02■■■■□ 3.68
LAPTM4B-203ENST00000521545 PNPLA6Q8IY17 1366 aa38.01■■■■□ 3.68
LAPTM4B-203ENST00000521545 SOS2Q07890 1332 aaPredicted RBP38■■■■□ 3.67
LAPTM4B-203ENST00000521545 PLEKHH1Q9ULM0 1364 aa38■■■■□ 3.67
LAPTM4B-203ENST00000521545 LAMC1P11047 1609 aa37.99■■■■□ 3.67
LAPTM4B-203ENST00000521545 NUTM2FA1L443 756 aa37.96■■■■□ 3.67
LAPTM4B-203ENST00000521545 NPHP3Q7Z494 1330 aa37.95■■■■□ 3.67
LAPTM4B-203ENST00000521545 KDM2AQ9Y2K7 1162 aa37.94■■■■□ 3.66
LAPTM4B-203ENST00000521545 DCAF11Q8TEB1 546 aa37.93■■■■□ 3.66
LAPTM4B-203ENST00000521545 STAC3Q96MF2 364 aa37.91■■■■□ 3.66
LAPTM4B-203ENST00000521545 AFF2P51816 1311 aa37.9■■■■□ 3.66
LAPTM4B-203ENST00000521545 FOXO3O43524 673 aa37.89■■■■□ 3.66
LAPTM4B-203ENST00000521545 C8orf37Q96NL8 207 aa37.89■■■■□ 3.66
LAPTM4B-203ENST00000521545 PRAM1Q96QH2 718 aa37.87■■■■□ 3.65
LAPTM4B-203ENST00000521545 POGKQ9P215 609 aa37.87■■■■□ 3.65
LAPTM4B-203ENST00000521545 ADAMTS2O95450 1211 aa37.85■■■■□ 3.65
LAPTM4B-203ENST00000521545 SAFB2Q14151 953 aaKnown RBP eCLIP37.85■■■■□ 3.65
LAPTM4B-203ENST00000521545 RXRBP28702 533 aa37.84■■■■□ 3.65
LAPTM4B-203ENST00000521545 FMN2Q9NZ56 1722 aa37.82■■■■□ 3.65
LAPTM4B-203ENST00000521545 XPCQ01831 940 aaPredicted RBP37.82■■■■□ 3.64
LAPTM4B-203ENST00000521545 NGLY1Q96IV0 654 aa37.82■■■■□ 3.64
LAPTM4B-203ENST00000521545 DLC1Q96QB1 1528 aa37.79■■■■□ 3.64
LAPTM4B-203ENST00000521545 TRAK1Q9UPV9 953 aa37.79■■■■□ 3.64
LAPTM4B-203ENST00000521545 PXDNQ92626 1479 aa37.78■■■■□ 3.64
LAPTM4B-203ENST00000521545 ADGRB1O14514 1584 aa37.76■■■■□ 3.63
LAPTM4B-203ENST00000521545 QTRT2Q9H974 415 aaKnown RBP37.75■■■■□ 3.63
LAPTM4B-203ENST00000521545 PHF8Q9UPP1 1060 aa37.73■■■■□ 3.63
LAPTM4B-203ENST00000521545 KIF1AQ12756 1690 aa37.72■■■■□ 3.63
LAPTM4B-203ENST00000521545 COL22A1Q8NFW1 1626 aaPredicted RBP37.72■■■■□ 3.63
LAPTM4B-203ENST00000521545 KRT28Q7Z3Y7 464 aa37.71■■■■□ 3.63
LAPTM4B-203ENST00000521545 RBM6P78332 1123 aaKnown RBP37.67■■■■□ 3.62
LAPTM4B-203ENST00000521545 PSME1Q06323 249 aa37.67■■■■□ 3.62
LAPTM4B-203ENST00000521545 CDK12Q9NYV4 1490 aaPredicted RBP37.66■■■■□ 3.62
LAPTM4B-203ENST00000521545 USP21Q9UK80 565 aa37.66■■■■□ 3.62
LAPTM4B-203ENST00000521545 RGPD8O14715 1765 aaPredicted RBP37.65■■■■□ 3.62
LAPTM4B-203ENST00000521545 SPATA31A3Q5VYP0 1347 aa37.65■■■■□ 3.62
LAPTM4B-203ENST00000521545 HIRIP3Q9BW71 556 aaPredicted RBP37.65■■■■□ 3.62
LAPTM4B-203ENST00000521545 MINK1Q8N4C8 1332 aaPredicted RBP37.64■■■■□ 3.62
LAPTM4B-203ENST00000521545 ANKARQ7Z5J8 1434 aa37.62■■■■□ 3.61
LAPTM4B-203ENST00000521545 FNBP4Q8N3X1 1017 aaPredicted RBP37.62■■■■□ 3.61
LAPTM4B-203ENST00000521545 ADGRB2O60241 1585 aa37.6■■■■□ 3.61
LAPTM4B-203ENST00000521545 EIF3AQ14152 1382 aaKnown RBP37.59■■■■□ 3.61
LAPTM4B-203ENST00000521545 TRPC5Q9UL62 973 aaPredicted RBP37.59■■■■□ 3.61
LAPTM4B-203ENST00000521545 PMFBP1Q8TBY8 1022 aa37.58■■■■□ 3.61
LAPTM4B-203ENST00000521545 WASLO00401 505 aaPredicted RBP37.56■■■■□ 3.6
LAPTM4B-203ENST00000521545 TNS3Q68CZ2 1445 aa37.53■■■■□ 3.6
LAPTM4B-203ENST00000521545 HAP1P54257 671 aaPredicted RBP37.53■■■■□ 3.6
LAPTM4B-203ENST00000521545 LMOD2Q6P5Q4 547 aa37.53■■■■□ 3.6
LAPTM4B-203ENST00000521545 SBNO1A3KN83 1393 aa37.53■■■■□ 3.6
LAPTM4B-203ENST00000521545 USP32Q8NFA0 1604 aa37.51■■■■□ 3.6
LAPTM4B-203ENST00000521545 UPF1Q92900 1129 aaKnown RBP eCLIP37.51■■■■□ 3.6
LAPTM4B-203ENST00000521545 MARF1Q9Y4F3 1742 aaKnown RBP37.5■■■■□ 3.59
LAPTM4B-203ENST00000521545 RGS12O14924 1447 aa37.49■■■■□ 3.59
LAPTM4B-203ENST00000521545 TULP4Q9NRJ4 1543 aa37.48■■■■□ 3.59
LAPTM4B-203ENST00000521545 ARHGEF10O15013 1369 aa37.47■■■■□ 3.59
LAPTM4B-203ENST00000521545 PRR36Q9H6K5 1346 aa37.47■■■■□ 3.59
LAPTM4B-203ENST00000521545 ARHGEF28Q8N1W1 1705 aaKnown RBP37.47■■■■□ 3.59
LAPTM4B-203ENST00000521545 ATRNO75882 1429 aa37.46■■■■□ 3.59
LAPTM4B-203ENST00000521545 GPRASP1Q5JY77 1395 aa37.46■■■■□ 3.59
LAPTM4B-203ENST00000521545 KIAA1210Q9ULL0 1709 aa37.46■■■■□ 3.59
LAPTM4B-203ENST00000521545 PLEKHG5O94827 1062 aa37.45■■■■□ 3.59
LAPTM4B-203ENST00000521545 BCL9LQ86UU0 1499 aa37.44■■■■□ 3.58
LAPTM4B-203ENST00000521545 NGDNQ8NEJ9 315 aaKnown RBP37.43■■■■□ 3.58
LAPTM4B-203ENST00000521545 CABLES1Q8TDN4 633 aa37.43■■■■□ 3.58
LAPTM4B-203ENST00000521545 NBPF1Q3BBV0 1214 aa37.42■■■■□ 3.58
LAPTM4B-203ENST00000521545 UNC5CLQ8IV45 518 aa37.39■■■■□ 3.58
LAPTM4B-203ENST00000521545 NUDT16Q96DE0 195 aaKnown RBP37.39■■■■□ 3.58
LAPTM4B-203ENST00000521545 CDK19Q9BWU1 502 aa37.38■■■■□ 3.57
LAPTM4B-203ENST00000521545 L3MBTL2Q969R5 705 aa37.37■■■■□ 3.57
LAPTM4B-203ENST00000521545 GJD4Q96KN9 370 aaPredicted RBP37.36■■■■□ 3.57
LAPTM4B-203ENST00000521545 SIN3AQ96ST3 1273 aa37.36■■■■□ 3.57
LAPTM4B-203ENST00000521545 NEUROD1Q13562 356 aa37.34■■■■□ 3.57
LAPTM4B-203ENST00000521545 SLIT2O94813 1529 aa37.34■■■■□ 3.57
LAPTM4B-203ENST00000521545 PAK3O75914 559 aaPredicted RBP37.32■■■■□ 3.56
LAPTM4B-203ENST00000521545 TRPM3Q9HCF6 1732 aaPredicted RBP37.3■■■■□ 3.56
LAPTM4B-203ENST00000521545 ATP7BP35670 1465 aa37.3■■■■□ 3.56
LAPTM4B-203ENST00000521545 ITSN1Q15811 1721 aa37.3■■■■□ 3.56
LAPTM4B-203ENST00000521545 TNKS1BP1Q9C0C2 1729 aaKnown RBP37.3■■■■□ 3.56
LAPTM4B-203ENST00000521545 ATAD2Q6PL18 1390 aa37.29■■■■□ 3.56
LAPTM4B-203ENST00000521545 CCDC61Q9Y6R9 512 aa37.27■■■■□ 3.56
LAPTM4B-203ENST00000521545 CENPJQ9HC77 1338 aaPredicted RBP37.27■■■■□ 3.56
LAPTM4B-203ENST00000521545 ABCA3Q99758 1704 aa37.24■■■■□ 3.55
LAPTM4B-203ENST00000521545 ALS2Q96Q42 1657 aa37.24■■■■□ 3.55
LAPTM4B-203ENST00000521545 FAM83GA6ND36 823 aa37.23■■■■□ 3.55
LAPTM4B-203ENST00000521545 RALGAPBQ86X10 1494 aa37.21■■■■□ 3.55
LAPTM4B-203ENST00000521545 SRPK2P78362 688 aaKnown RBP37.21■■■■□ 3.55
LAPTM4B-203ENST00000521545 VPS72Q15906 364 aa37.21■■■■□ 3.55
LAPTM4B-203ENST00000521545 CCDC9Q9Y3X0 531 aaKnown RBP37.21■■■■□ 3.55
LAPTM4B-203ENST00000521545 ACEP12821 1306 aa37.19■■■■□ 3.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms