RNA–Protein interactions for RNA: ENST00000521332.5

PTK2-231, Transcript of protein tyrosine kinase 2, human

TSL 4

Gene PTK2, Length 630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTK2-231	ENST00000521332	COL22A1	Q8NFW1	1626 aa	Predicted RBP	27.6	■■■□□ 2.01
PTK2-231	ENST00000521332	NPHP3	Q7Z494	1330 aa		27.6	■■■□□ 2.01
PTK2-231	ENST00000521332	PRAG1	Q86YV5	1406 aa		27.59	■■■□□ 2.01
PTK2-231	ENST00000521332	XPC	Q01831	940 aa	Predicted RBP	27.59	■■■□□ 2.01
PTK2-231	ENST00000521332	FNBP4	Q8N3X1	1017 aa	Predicted RBP	27.59	■■■□□ 2.01
PTK2-231	ENST00000521332	NUTM2F	A1L443	756 aa		27.58	■■■□□ 2.01
PTK2-231	ENST00000521332	FOXD1	Q16676	465 aa		27.58	■■■□□ 2.01
PTK2-231	ENST00000521332	STK26	Q9P289	416 aa		27.58	■■■□□ 2.01
PTK2-231	ENST00000521332	CDC42BPG	Q6DT37	1551 aa		27.57	■■■□□ 2
PTK2-231	ENST00000521332	FOXO3	O43524	673 aa		27.56	■■■□□ 2
PTK2-231	ENST00000521332	ATRN	O75882	1429 aa		27.56	■■■□□ 2
PTK2-231	ENST00000521332	RGL3	Q3MIN7	710 aa		27.55	■■■□□ 2
PTK2-231	ENST00000521332	MARF1	Q9Y4F3	1742 aa	Known RBP	27.53	■■■□□ 2
PTK2-231	ENST00000521332	MYOM2	P54296	1465 aa		27.53	■■■□□ 2
PTK2-231	ENST00000521332	ADGRF5	Q8IZF2	1346 aa		27.53	■■■□□ 2
PTK2-231	ENST00000521332	PXDN	Q92626	1479 aa		27.52	■■■□□ 2
PTK2-231	ENST00000521332	WAPL	Q7Z5K2	1190 aa		27.52	■■■□□ 2
PTK2-231	ENST00000521332	CCDC144A	A2RUR9	1427 aa		27.5	■■□□□ 1.99
PTK2-231	ENST00000521332	LRPPRC	P42704	1394 aa	Known RBP	27.5	■■□□□ 1.99
PTK2-231	ENST00000521332	BCL9L	Q86UU0	1499 aa		27.48	■■□□□ 1.99
PTK2-231	ENST00000521332	SRCAP	Q6ZRS2	3230 aa		27.48	■■□□□ 1.99
PTK2-231	ENST00000521332	TMEM132E	Q6IEE7	984 aa		27.47	■■□□□ 1.99
PTK2-231	ENST00000521332	ZRANB1	Q9UGI0	708 aa		27.47	■■□□□ 1.99
PTK2-231	ENST00000521332	EP400	Q96L91	3159 aa		27.46	■■□□□ 1.99
PTK2-231	ENST00000521332	GJD4	Q96KN9	370 aa	Predicted RBP	27.45	■■□□□ 1.98
PTK2-231	ENST00000521332	PLEKHH1	Q9ULM0	1364 aa		27.44	■■□□□ 1.98
PTK2-231	ENST00000521332	IFT172	Q9UG01	1749 aa		27.43	■■□□□ 1.98
PTK2-231	ENST00000521332	TECPR2	O15040	1411 aa		27.42	■■□□□ 1.98
PTK2-231	ENST00000521332	ANKRD30B	Q9BXX2	1392 aa		27.42	■■□□□ 1.98
PTK2-231	ENST00000521332	KNDC1	Q76NI1	1749 aa		27.41	■■□□□ 1.98
PTK2-231	ENST00000521332	FMN2	Q9NZ56	1722 aa		27.41	■■□□□ 1.98
PTK2-231	ENST00000521332	PLEKHG5	O94827	1062 aa		27.41	■■□□□ 1.98
PTK2-231	ENST00000521332	ABCC11	Q96J66	1382 aa		27.4	■■□□□ 1.98
PTK2-231	ENST00000521332	HAP1	P54257	671 aa	Predicted RBP	27.4	■■□□□ 1.98
PTK2-231	ENST00000521332	CCDC125	Q86Z20	511 aa		27.4	■■□□□ 1.98
PTK2-231	ENST00000521332	SPATA31E1	Q6ZUB1	1445 aa		27.4	■■□□□ 1.98
PTK2-231	ENST00000521332	KIF1A	Q12756	1690 aa		27.4	■■□□□ 1.98
PTK2-231	ENST00000521332	SPATA31A3	Q5VYP0	1347 aa		27.39	■■□□□ 1.97
PTK2-231	ENST00000521332	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	27.38	■■□□□ 1.97
PTK2-231	ENST00000521332	KRT28	Q7Z3Y7	464 aa		27.38	■■□□□ 1.97
PTK2-231	ENST00000521332	UNC5CL	Q8IV45	518 aa		27.38	■■□□□ 1.97
PTK2-231	ENST00000521332	MPHOSPH9	Q99550	1183 aa		27.37	■■□□□ 1.97
PTK2-231	ENST00000521332	PIK3C2G	O75747	1445 aa		27.36	■■□□□ 1.97
PTK2-231	ENST00000521332	YTHDC2	Q9H6S0	1430 aa	Known RBP	27.36	■■□□□ 1.97
PTK2-231	ENST00000521332	RALGAPB	Q86X10	1494 aa		27.35	■■□□□ 1.97
PTK2-231	ENST00000521332	USP32	Q8NFA0	1604 aa		27.34	■■□□□ 1.97
PTK2-231	ENST00000521332	RGPD8	O14715	1765 aa	Predicted RBP	27.34	■■□□□ 1.97
PTK2-231	ENST00000521332	GLI3	P10071	1580 aa		27.34	■■□□□ 1.97
PTK2-231	ENST00000521332	SLIT2	O94813	1529 aa		27.33	■■□□□ 1.97
PTK2-231	ENST00000521332	LMOD2	Q6P5Q4	547 aa		27.33	■■□□□ 1.97
PTK2-231	ENST00000521332	CABLES1	Q8TDN4	633 aa		27.31	■■□□□ 1.96
PTK2-231	ENST00000521332	PHF8	Q9UPP1	1060 aa		27.31	■■□□□ 1.96
PTK2-231	ENST00000521332	CCDC9	Q9Y3X0	531 aa	Known RBP	27.31	■■□□□ 1.96
PTK2-231	ENST00000521332	PSME1	Q06323	249 aa		27.3	■■□□□ 1.96
PTK2-231	ENST00000521332	SAFB2	Q14151	953 aa	Known RBP eCLIP	27.3	■■□□□ 1.96
PTK2-231	ENST00000521332	BRWD3	Q6RI45	1802 aa		27.3	■■□□□ 1.96
PTK2-231	ENST00000521332	TNS3	Q68CZ2	1445 aa		27.29	■■□□□ 1.96
PTK2-231	ENST00000521332	BLM	P54132	1417 aa	Predicted RBP	27.28	■■□□□ 1.96
PTK2-231	ENST00000521332	SF3B2	Q13435	895 aa	Known RBP	27.27	■■□□□ 1.96
PTK2-231	ENST00000521332	DHX57	Q6P158	1386 aa	Known RBP	27.26	■■□□□ 1.95
PTK2-231	ENST00000521332	SEPT12	Q8IYM1	358 aa		27.26	■■□□□ 1.95
PTK2-231	ENST00000521332	PLCH1	Q4KWH8	1693 aa		27.25	■■□□□ 1.95
PTK2-231	ENST00000521332	CFAP70	Q5T0N1	1121 aa		27.25	■■□□□ 1.95
PTK2-231	ENST00000521332	C14orf93	Q9H972	538 aa	Known RBP	27.25	■■□□□ 1.95
PTK2-231	ENST00000521332	SIRT1	Q96EB6	747 aa		27.24	■■□□□ 1.95
PTK2-231	ENST00000521332	DEFB132	Q7Z7B7	95 aa		27.23	■■□□□ 1.95
PTK2-231	ENST00000521332	PRAM1	Q96QH2	718 aa		27.23	■■□□□ 1.95
PTK2-231	ENST00000521332		A0A0G2JS52	829 aa		27.22	■■□□□ 1.95
PTK2-231	ENST00000521332	MYT1	Q01538	1121 aa		27.22	■■□□□ 1.95
PTK2-231	ENST00000521332	VPS72	Q15906	364 aa		27.22	■■□□□ 1.95
PTK2-231	ENST00000521332	PMFBP1	Q8TBY8	1022 aa		27.21	■■□□□ 1.95
PTK2-231	ENST00000521332	POGK	Q9P215	609 aa		27.21	■■□□□ 1.95
PTK2-231	ENST00000521332	ABCA3	Q99758	1704 aa		27.21	■■□□□ 1.95
PTK2-231	ENST00000521332	NRXN1	Q9ULB1	1477 aa		27.2	■■□□□ 1.95
PTK2-231	ENST00000521332	NWD2	Q9ULI1	1742 aa		27.2	■■□□□ 1.94
PTK2-231	ENST00000521332	ARHGEF10	O15013	1369 aa		27.2	■■□□□ 1.94
PTK2-231	ENST00000521332	SBNO1	A3KN83	1393 aa		27.19	■■□□□ 1.94
PTK2-231	ENST00000521332	KRT27	Q7Z3Y8	459 aa		27.17	■■□□□ 1.94
PTK2-231	ENST00000521332	FAM83G	A6ND36	823 aa		27.13	■■□□□ 1.93
PTK2-231	ENST00000521332	HIRIP3	Q9BW71	556 aa	Predicted RBP	27.13	■■□□□ 1.93
PTK2-231	ENST00000521332	ANKAR	Q7Z5J8	1434 aa		27.11	■■□□□ 1.93
PTK2-231	ENST00000521332	ONECUT3	O60422	494 aa	Predicted RBP	27.1	■■□□□ 1.93
PTK2-231	ENST00000521332	FAM98C	Q17RN3	349 aa	Known RBP	27.1	■■□□□ 1.93
PTK2-231	ENST00000521332	BTG4	Q9NY30	223 aa		27.1	■■□□□ 1.93
PTK2-231	ENST00000521332	TRAK1	Q9UPV9	953 aa		27.1	■■□□□ 1.93
PTK2-231	ENST00000521332	DLC1	Q96QB1	1528 aa		27.1	■■□□□ 1.93
PTK2-231	ENST00000521332	MINK1	Q8N4C8	1332 aa	Predicted RBP	27.09	■■□□□ 1.93
PTK2-231	ENST00000521332	GPRASP1	Q5JY77	1395 aa		27.09	■■□□□ 1.93
PTK2-231	ENST00000521332	ACIN1	Q9UKV3	1341 aa	Known RBP	27.08	■■□□□ 1.93
PTK2-231	ENST00000521332	NRAP	Q86VF7	1730 aa		27.07	■■□□□ 1.92
PTK2-231	ENST00000521332	ADGRB2	O60241	1585 aa		27.07	■■□□□ 1.92
PTK2-231	ENST00000521332	BAG6	P46379	1132 aa		27.07	■■□□□ 1.92
PTK2-231	ENST00000521332	TRPM3	Q9HCF6	1732 aa	Predicted RBP	27.07	■■□□□ 1.92
PTK2-231	ENST00000521332	COL14A1	Q05707	1796 aa	Known RBP	27.04	■■□□□ 1.92
PTK2-231	ENST00000521332	PSD	A5PKW4	1024 aa	Predicted RBP	27.04	■■□□□ 1.92
PTK2-231	ENST00000521332	PAK3	O75914	559 aa	Predicted RBP	27.04	■■□□□ 1.92
PTK2-231	ENST00000521332	KDM2A	Q9Y2K7	1162 aa		27.04	■■□□□ 1.92
PTK2-231	ENST00000521332	EIF3A	Q14152	1382 aa	Known RBP	27.03	■■□□□ 1.92
PTK2-231	ENST00000521332	ALS2	Q96Q42	1657 aa		27.03	■■□□□ 1.92
PTK2-231	ENST00000521332	ADGRB1	O14514	1584 aa		27.02	■■□□□ 1.92

Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms