RNA–Protein interactions for RNA: ENST00000521331.5

PRKDC-204, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-204ENST00000521331 NPHP3Q7Z494 1330 aa22.26■■□□□ 1.15
PRKDC-204ENST00000521331 ADGRF5Q8IZF2 1346 aa22.26■■□□□ 1.15
PRKDC-204ENST00000521331 CDC42BPGQ6DT37 1551 aa22.25■■□□□ 1.15
PRKDC-204ENST00000521331 ESCO1Q5FWF5 840 aa22.25■■□□□ 1.15
PRKDC-204ENST00000521331 RGL3Q3MIN7 710 aa22.24■■□□□ 1.15
PRKDC-204ENST00000521331 TECPR2O15040 1411 aa22.23■■□□□ 1.15
PRKDC-204ENST00000521331 SPATA31E1Q6ZUB1 1445 aa22.23■■□□□ 1.15
PRKDC-204ENST00000521331 USP21Q9UK80 565 aa22.23■■□□□ 1.15
PRKDC-204ENST00000521331 LRPPRCP42704 1394 aaKnown RBP22.23■■□□□ 1.15
PRKDC-204ENST00000521331 FNBP4Q8N3X1 1017 aaPredicted RBP22.22■■□□□ 1.15
PRKDC-204ENST00000521331 MPHOSPH9Q99550 1183 aa22.22■■□□□ 1.15
PRKDC-204ENST00000521331 TRPC5Q9UL62 973 aaPredicted RBP22.22■■□□□ 1.15
PRKDC-204ENST00000521331 STK26Q9P289 416 aa22.21■■□□□ 1.15
PRKDC-204ENST00000521331 ABCC11Q96J66 1382 aa22.21■■□□□ 1.15
PRKDC-204ENST00000521331 WAPLQ7Z5K2 1190 aa22.19■■□□□ 1.14
PRKDC-204ENST00000521331 MYOM2P54296 1465 aa22.19■■□□□ 1.14
PRKDC-204ENST00000521331 COL22A1Q8NFW1 1626 aaPredicted RBP22.19■■□□□ 1.14
PRKDC-204ENST00000521331 PXDNQ92626 1479 aa22.18■■□□□ 1.14
PRKDC-204ENST00000521331 ACIN1Q9UKV3 1341 aaKnown RBP22.18■■□□□ 1.14
PRKDC-204ENST00000521331 FOXO3O43524 673 aa22.18■■□□□ 1.14
PRKDC-204ENST00000521331 PIK3C2GO75747 1445 aa22.17■■□□□ 1.14
PRKDC-204ENST00000521331 ATRNO75882 1429 aa22.16■■□□□ 1.14
PRKDC-204ENST00000521331 ATAD2Q6PL18 1390 aa22.16■■□□□ 1.14
PRKDC-204ENST00000521331 TMEM132EQ6IEE7 984 aa22.16■■□□□ 1.14
PRKDC-204ENST00000521331 XPCQ01831 940 aaPredicted RBP22.14■■□□□ 1.13
PRKDC-204ENST00000521331 YTHDC2Q9H6S0 1430 aaKnown RBP22.14■■□□□ 1.13
PRKDC-204ENST00000521331 PLEKHH1Q9ULM0 1364 aa22.13■■□□□ 1.13
PRKDC-204ENST00000521331 NUTM2FA1L443 756 aa22.13■■□□□ 1.13
PRKDC-204ENST00000521331 SIRT1Q96EB6 747 aa22.13■■□□□ 1.13
PRKDC-204ENST00000521331 IFT172Q9UG01 1749 aa22.12■■□□□ 1.13
PRKDC-204ENST00000521331 KNDC1Q76NI1 1749 aa22.11■■□□□ 1.13
PRKDC-204ENST00000521331 C14orf93Q9H972 538 aaKnown RBP22.1■■□□□ 1.13
PRKDC-204ENST00000521331 BCL9LQ86UU0 1499 aa22.09■■□□□ 1.13
PRKDC-204ENST00000521331 SPATA31A3Q5VYP0 1347 aa22.08■■□□□ 1.13
PRKDC-204ENST00000521331 DHX57Q6P158 1386 aaKnown RBP22.07■■□□□ 1.12
PRKDC-204ENST00000521331 GJD4Q96KN9 370 aaPredicted RBP22.06■■□□□ 1.12
PRKDC-204ENST00000521331 NRXN1Q9ULB1 1477 aa22.06■■□□□ 1.12
PRKDC-204ENST00000521331 FMN2Q9NZ56 1722 aa22.06■■□□□ 1.12
PRKDC-204ENST00000521331 KIF1AQ12756 1690 aa22.05■■□□□ 1.12
PRKDC-204ENST00000521331 KRT28Q7Z3Y7 464 aa22.05■■□□□ 1.12
PRKDC-204ENST00000521331 PSME1Q06323 249 aa22.03■■□□□ 1.12
PRKDC-204ENST00000521331 CFAP70Q5T0N1 1121 aa22.03■■□□□ 1.12
PRKDC-204ENST00000521331 UNC5CLQ8IV45 518 aa22.03■■□□□ 1.12
PRKDC-204ENST00000521331 PHF8Q9UPP1 1060 aa22.03■■□□□ 1.12
PRKDC-204ENST00000521331 CCDC125Q86Z20 511 aa22.02■■□□□ 1.12
PRKDC-204ENST00000521331 MARF1Q9Y4F3 1742 aaKnown RBP22.01■■□□□ 1.11
PRKDC-204ENST00000521331 SLIT2O94813 1529 aa22.01■■□□□ 1.11
PRKDC-204ENST00000521331 TNS3Q68CZ2 1445 aa22■■□□□ 1.11
PRKDC-204ENST00000521331 PRAM1Q96QH2 718 aa22■■□□□ 1.11
PRKDC-204ENST00000521331 HAP1P54257 671 aaPredicted RBP21.99■■□□□ 1.11
PRKDC-204ENST00000521331 SBNO1A3KN83 1393 aa21.98■■□□□ 1.11
PRKDC-204ENST00000521331 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.97■■□□□ 1.11
PRKDC-204ENST00000521331 RALGAPBQ86X10 1494 aa21.97■■□□□ 1.11
PRKDC-204ENST00000521331 SAFB2Q14151 953 aaKnown RBP eCLIP21.97■■□□□ 1.11
PRKDC-204ENST00000521331 POGKQ9P215 609 aa21.97■■□□□ 1.11
PRKDC-204ENST00000521331 DLC1Q96QB1 1528 aa21.96■■□□□ 1.11
PRKDC-204ENST00000521331 USP32Q8NFA0 1604 aa21.96■■□□□ 1.11
PRKDC-204ENST00000521331 ZRANB1Q9UGI0 708 aa21.96■■□□□ 1.11
PRKDC-204ENST00000521331 ARHGEF10O15013 1369 aa21.96■■□□□ 1.11
PRKDC-204ENST00000521331 ANKARQ7Z5J8 1434 aa21.96■■□□□ 1.11
PRKDC-204ENST00000521331 RAB3GAP2Q9H2M9 1393 aa21.95■■□□□ 1.1
PRKDC-204ENST00000521331 GLI3P10071 1580 aa21.92■■□□□ 1.1
PRKDC-204ENST00000521331 VPS72Q15906 364 aa21.92■■□□□ 1.1
PRKDC-204ENST00000521331 LMOD2Q6P5Q4 547 aa21.92■■□□□ 1.1
PRKDC-204ENST00000521331 CABLES1Q8TDN4 633 aa21.92■■□□□ 1.1
PRKDC-204ENST00000521331 EP400Q96L91 3159 aa21.92■■□□□ 1.1
PRKDC-204ENST00000521331 EIF3AQ14152 1382 aaKnown RBP21.9■■□□□ 1.1
PRKDC-204ENST00000521331 PMFBP1Q8TBY8 1022 aa21.9■■□□□ 1.1
PRKDC-204ENST00000521331 SRCAPQ6ZRS2 3230 aa21.9■■□□□ 1.1
PRKDC-204ENST00000521331 ADGRB1O14514 1584 aa21.9■■□□□ 1.1
PRKDC-204ENST00000521331 ADGRB2O60241 1585 aa21.9■■□□□ 1.1
PRKDC-204ENST00000521331 BLMP54132 1417 aaPredicted RBP21.89■■□□□ 1.1
PRKDC-204ENST00000521331 STAC3Q96MF2 364 aa21.89■■□□□ 1.09
PRKDC-204ENST00000521331 TRAK1Q9UPV9 953 aa21.89■■□□□ 1.09
PRKDC-204ENST00000521331 SEPT12Q8IYM1 358 aa21.88■■□□□ 1.09
PRKDC-204ENST00000521331 PLEKHG5O94827 1062 aa21.87■■□□□ 1.09
PRKDC-204ENST00000521331 CCDC9Q9Y3X0 531 aaKnown RBP21.87■■□□□ 1.09
PRKDC-204ENST00000521331 RGPD8O14715 1765 aaPredicted RBP21.87■■□□□ 1.09
PRKDC-204ENST00000521331 GPRASP1Q5JY77 1395 aa21.87■■□□□ 1.09
PRKDC-204ENST00000521331 ONECUT3O60422 494 aaPredicted RBP21.86■■□□□ 1.09
PRKDC-204ENST00000521331 HIRIP3Q9BW71 556 aaPredicted RBP21.86■■□□□ 1.09
PRKDC-204ENST00000521331 DCAF11Q8TEB1 546 aa21.85■■□□□ 1.09
PRKDC-204ENST00000521331 KDM2AQ9Y2K7 1162 aa21.85■■□□□ 1.09
PRKDC-204ENST00000521331 MINK1Q8N4C8 1332 aaPredicted RBP21.84■■□□□ 1.09
PRKDC-204ENST00000521331 NWD2Q9ULI1 1742 aa21.84■■□□□ 1.09
PRKDC-204ENST00000521331 FAM83GA6ND36 823 aa21.84■■□□□ 1.09
PRKDC-204ENST00000521331 SF3B2Q13435 895 aaKnown RBP21.84■■□□□ 1.09
PRKDC-204ENST00000521331 WASLO00401 505 aaPredicted RBP21.83■■□□□ 1.09
PRKDC-204ENST00000521331 TULP4Q9NRJ4 1543 aa21.82■■□□□ 1.08
PRKDC-204ENST00000521331 PLCH1Q4KWH8 1693 aa21.82■■□□□ 1.08
PRKDC-204ENST00000521331 PRR36Q9H6K5 1346 aa21.81■■□□□ 1.08
PRKDC-204ENST00000521331 ABCA3Q99758 1704 aa21.81■■□□□ 1.08
PRKDC-204ENST00000521331 KRT27Q7Z3Y8 459 aa21.81■■□□□ 1.08
PRKDC-204ENST00000521331 HRCP23327 699 aa21.8■■□□□ 1.08
PRKDC-204ENST00000521331 NGDNQ8NEJ9 315 aaKnown RBP21.79■■□□□ 1.08
PRKDC-204ENST00000521331 BTG4Q9NY30 223 aa21.78■■□□□ 1.08
PRKDC-204ENST00000521331 TRPM3Q9HCF6 1732 aaPredicted RBP21.77■■□□□ 1.08
PRKDC-204ENST00000521331 A0A0G2JS52 829 aa21.77■■□□□ 1.08
PRKDC-204ENST00000521331 MYT1Q01538 1121 aa21.77■■□□□ 1.08
PRKDC-204ENST00000521331 DEFB132Q7Z7B7 95 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms