RNA–Protein interactions for RNA: ENST00000521214.5

SPIDR-213, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-213	ENST00000521214	RSPH6A	Q9H0K4	717 aa		10.47	□□□□□ -0.73
SPIDR-213	ENST00000521214	ERVK-7	P63135	1459 aa		10.47	□□□□□ -0.73
SPIDR-213	ENST00000521214	CAMSAP1	Q5T5Y3	1602 aa		10.47	□□□□□ -0.73
SPIDR-213	ENST00000521214	NPM2	Q86SE8	214 aa	Known RBP	10.47	□□□□□ -0.73
SPIDR-213	ENST00000521214	KIF1B	O60333	1816 aa		10.47	□□□□□ -0.73
SPIDR-213	ENST00000521214	SYNM	O15061	1565 aa		10.47	□□□□□ -0.73
SPIDR-213	ENST00000521214	PER1	O15534	1290 aa	Predicted RBP	10.46	□□□□□ -0.73
SPIDR-213	ENST00000521214	CDCA7L	Q96GN5	454 aa		10.46	□□□□□ -0.73
SPIDR-213	ENST00000521214	KCNA6	P17658	529 aa		10.46	□□□□□ -0.73
SPIDR-213	ENST00000521214	THEMIS	Q8N1K5	641 aa	Predicted RBP	10.46	□□□□□ -0.73
SPIDR-213	ENST00000521214	ADAMTS8	Q9UP79	889 aa		10.46	□□□□□ -0.73
SPIDR-213	ENST00000521214	MYO5B	Q9ULV0	1848 aa		10.46	□□□□□ -0.73
SPIDR-213	ENST00000521214	LTV1	Q96GA3	475 aa	Predicted RBP	10.45	□□□□□ -0.74
SPIDR-213	ENST00000521214	HDGF	P51858	240 aa	Known RBP	10.45	□□□□□ -0.74
SPIDR-213	ENST00000521214	NGDN	Q8NEJ9	315 aa	Known RBP	10.45	□□□□□ -0.74
SPIDR-213	ENST00000521214	MYBBP1A	Q9BQG0	1328 aa	Known RBP	10.45	□□□□□ -0.74
SPIDR-213	ENST00000521214	PPP2R1A	P30153	589 aa		10.45	□□□□□ -0.74
SPIDR-213	ENST00000521214	RRS1	Q15050	365 aa	Known RBP	10.45	□□□□□ -0.74
SPIDR-213	ENST00000521214	TRPM1	Q7Z4N2	1603 aa		10.44	□□□□□ -0.74
SPIDR-213	ENST00000521214	MTHFS	P49914	203 aa		10.44	□□□□□ -0.74
SPIDR-213	ENST00000521214	NME9	Q86XW9	330 aa		10.44	□□□□□ -0.74
SPIDR-213	ENST00000521214	POLR1A	O95602	1720 aa	Predicted RBP	10.44	□□□□□ -0.74
SPIDR-213	ENST00000521214	DEPDC5	O75140	1603 aa		10.44	□□□□□ -0.74
SPIDR-213	ENST00000521214	RPGRIP1L	Q68CZ1	1315 aa		10.44	□□□□□ -0.74
SPIDR-213	ENST00000521214	NLRP13	Q86W25	1043 aa		10.44	□□□□□ -0.74
SPIDR-213	ENST00000521214	DDX17	Q92841	729 aa	Known RBP	10.44	□□□□□ -0.74
SPIDR-213	ENST00000521214	NSD3	Q9BZ95	1437 aa		10.44	□□□□□ -0.74
SPIDR-213	ENST00000521214	U2AF1L5	P0DN76	240 aa	Predicted RBP	10.43	□□□□□ -0.74
SPIDR-213	ENST00000521214	U2AF1	Q01081	240 aa	Known RBP eCLIP	10.43	□□□□□ -0.74
SPIDR-213	ENST00000521214	VWDE	Q8N2E2	1590 aa		10.43	□□□□□ -0.74
SPIDR-213	ENST00000521214	HMOX1	P09601	288 aa		10.42	□□□□□ -0.74
SPIDR-213	ENST00000521214	B4GALNT3	Q6L9W6	998 aa		10.42	□□□□□ -0.74
SPIDR-213	ENST00000521214	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	10.42	□□□□□ -0.74
SPIDR-213	ENST00000521214	PNISR	Q8TF01	805 aa	Known RBP	10.42	□□□□□ -0.74
SPIDR-213	ENST00000521214	NUDT16	Q96DE0	195 aa	Known RBP	10.42	□□□□□ -0.74
SPIDR-213	ENST00000521214	MADD	Q8WXG6	1647 aa		10.42	□□□□□ -0.74
SPIDR-213	ENST00000521214	PIK3C2G	O75747	1445 aa		10.42	□□□□□ -0.74
SPIDR-213	ENST00000521214	APAF1	O14727	1248 aa		10.42	□□□□□ -0.74
SPIDR-213	ENST00000521214	AMER1	Q5JTC6	1135 aa	Predicted RBP	10.42	□□□□□ -0.74
SPIDR-213	ENST00000521214	ANKLE2	Q86XL3	938 aa		10.42	□□□□□ -0.74
SPIDR-213	ENST00000521214	YTHDC2	Q9H6S0	1430 aa	Known RBP	10.42	□□□□□ -0.74
SPIDR-213	ENST00000521214	EIF2AK4	Q9P2K8	1649 aa	Known RBP	10.42	□□□□□ -0.74
SPIDR-213	ENST00000521214	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	10.41	□□□□□ -0.74
SPIDR-213	ENST00000521214	GPRASP1	Q5JY77	1395 aa		10.41	□□□□□ -0.74
SPIDR-213	ENST00000521214	A2ML1	A8K2U0	1454 aa		10.41	□□□□□ -0.74
SPIDR-213	ENST00000521214	RALBP1	Q15311	655 aa		10.41	□□□□□ -0.74
SPIDR-213	ENST00000521214	PLIN1	O60240	522 aa		10.41	□□□□□ -0.74
SPIDR-213	ENST00000521214	ARHGEF40	Q8TER5	1519 aa		10.41	□□□□□ -0.74
SPIDR-213	ENST00000521214	TMEM2	Q9UHN6	1383 aa		10.4	□□□□□ -0.74
SPIDR-213	ENST00000521214	IPO9	Q96P70	1041 aa	Known RBP	10.4	□□□□□ -0.74
SPIDR-213	ENST00000521214	PIK3C2B	O00750	1634 aa		10.4	□□□□□ -0.74
SPIDR-213	ENST00000521214	ESCO1	Q5FWF5	840 aa		10.4	□□□□□ -0.74
SPIDR-213	ENST00000521214	TERF2IP	Q9NYB0	399 aa		10.39	□□□□□ -0.75
SPIDR-213	ENST00000521214	PREX1	Q8TCU6	1659 aa		10.39	□□□□□ -0.75
SPIDR-213	ENST00000521214	FOXO3	O43524	673 aa		10.39	□□□□□ -0.75
SPIDR-213	ENST00000521214	PROSER2	Q86WR7	435 aa	Predicted RBP	10.39	□□□□□ -0.75
SPIDR-213	ENST00000521214	PPP4R2	Q9NY27	417 aa		10.39	□□□□□ -0.75
SPIDR-213	ENST00000521214	EMILIN1	Q9Y6C2	1016 aa		10.39	□□□□□ -0.75
SPIDR-213	ENST00000521214	ADGRB3	O60242	1522 aa		10.39	□□□□□ -0.75
SPIDR-213	ENST00000521214	ROBO2	Q9HCK4	1378 aa		10.39	□□□□□ -0.75
SPIDR-213	ENST00000521214	WASL	O00401	505 aa	Predicted RBP	10.38	□□□□□ -0.75
SPIDR-213	ENST00000521214	PDE4C	Q08493	712 aa		10.38	□□□□□ -0.75
SPIDR-213	ENST00000521214	CGNL1	Q0VF96	1302 aa		10.38	□□□□□ -0.75
SPIDR-213	ENST00000521214	ZMYM4	Q5VZL5	1548 aa		10.38	□□□□□ -0.75
SPIDR-213	ENST00000521214	BCL2L13	Q9BXK5	485 aa		10.37	□□□□□ -0.75
SPIDR-213	ENST00000521214	PPP6R1	Q9UPN7	881 aa		10.37	□□□□□ -0.75
SPIDR-213	ENST00000521214		A0A1W2PP64	1363 aa		10.37	□□□□□ -0.75
SPIDR-213	ENST00000521214	STAC3	Q96MF2	364 aa		10.37	□□□□□ -0.75
SPIDR-213	ENST00000521214	NAP1L5	Q96NT1	182 aa	Predicted RBP	10.37	□□□□□ -0.75
SPIDR-213	ENST00000521214	NEXMIF	Q5QGS0	1516 aa		10.36	□□□□□ -0.75
SPIDR-213	ENST00000521214	TCERG1	O14776	1098 aa	Known RBP	10.36	□□□□□ -0.75
SPIDR-213	ENST00000521214	HSP90AA2P	Q14568	343 aa	Predicted RBP	10.36	□□□□□ -0.75
SPIDR-213	ENST00000521214	LMTK2	Q8IWU2	1503 aa		10.36	□□□□□ -0.75
SPIDR-213	ENST00000521214	FYB1	O15117	783 aa		10.36	□□□□□ -0.75
SPIDR-213	ENST00000521214	ARHGAP31	Q2M1Z3	1444 aa		10.36	□□□□□ -0.75
SPIDR-213	ENST00000521214	ORAI2	Q96SN7	254 aa		10.35	□□□□□ -0.75
SPIDR-213	ENST00000521214	PRR36	Q9H6K5	1346 aa		10.35	□□□□□ -0.75
SPIDR-213	ENST00000521214	ACE	P12821	1306 aa		10.35	□□□□□ -0.75
SPIDR-213	ENST00000521214	ELL2	O00472	640 aa	Predicted RBP	10.35	□□□□□ -0.75
SPIDR-213	ENST00000521214	NLRP6	P59044	892 aa		10.34	□□□□□ -0.75
SPIDR-213	ENST00000521214	THUMPD2	Q9BTF0	503 aa	Known RBP	10.34	□□□□□ -0.75
SPIDR-213	ENST00000521214	CCDC61	Q9Y6R9	512 aa		10.34	□□□□□ -0.75
SPIDR-213	ENST00000521214	RIMS1	Q86UR5	1692 aa	Known RBP	10.34	□□□□□ -0.75
SPIDR-213	ENST00000521214	ABTB2	Q8N961	1025 aa		10.33	□□□□□ -0.76
SPIDR-213	ENST00000521214	DMRT2	Q9Y5R5	561 aa		10.33	□□□□□ -0.76
SPIDR-213	ENST00000521214	MYOM2	P54296	1465 aa		10.33	□□□□□ -0.76
SPIDR-213	ENST00000521214	TMEM131L	A2VDJ0	1609 aa		10.33	□□□□□ -0.76
SPIDR-213	ENST00000521214	PSME1	Q06323	249 aa		10.32	□□□□□ -0.76
SPIDR-213	ENST00000521214	CABLES1	Q8TDN4	633 aa		10.32	□□□□□ -0.76
SPIDR-213	ENST00000521214	COG3	Q96JB2	828 aa		10.32	□□□□□ -0.76
SPIDR-213	ENST00000521214	ALK	Q9UM73	1620 aa		10.32	□□□□□ -0.76
SPIDR-213	ENST00000521214	USHBP1	Q8N6Y0	703 aa		10.32	□□□□□ -0.76
SPIDR-213	ENST00000521214	CFAP53	Q96M91	514 aa		10.32	□□□□□ -0.76
SPIDR-213	ENST00000521214	PTPRM	P28827	1452 aa		10.32	□□□□□ -0.76
SPIDR-213	ENST00000521214	RBM10	P98175	930 aa	Known RBP	10.31	□□□□□ -0.76
SPIDR-213	ENST00000521214	FRAT1	Q92837	279 aa	Predicted RBP	10.31	□□□□□ -0.76
SPIDR-213	ENST00000521214	PPIP5K1	Q6PFW1	1433 aa		10.31	□□□□□ -0.76
SPIDR-213	ENST00000521214	HSP90AA1	P07900	732 aa	Known RBP	10.31	□□□□□ -0.76
SPIDR-213	ENST00000521214	SETD1B	Q9UPS6	1966 aa	Known RBP	10.31	□□□□□ -0.76
SPIDR-213	ENST00000521214	KDM4F	A0A1W2PPD8	638 aa		10.31	□□□□□ -0.76

Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms