RNA–Protein interactions for RNA: ENST00000521127.1

SNHG6-204, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 2

Gene SNHG6, Length 560 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-204ENST00000521127 TRPC5Q9UL62 973 aaPredicted RBP28.08■■■□□ 2.09
SNHG6-204ENST00000521127 FOXD1Q16676 465 aa28.06■■■□□ 2.08
SNHG6-204ENST00000521127 ESCO1Q5FWF5 840 aa28.06■■■□□ 2.08
SNHG6-204ENST00000521127 ATRNO75882 1429 aa28.06■■■□□ 2.08
SNHG6-204ENST00000521127 MYOM2P54296 1465 aa28.05■■■□□ 2.08
SNHG6-204ENST00000521127 CDC42BPGQ6DT37 1551 aa28.05■■■□□ 2.08
SNHG6-204ENST00000521127 ADGRF5Q8IZF2 1346 aa28.05■■■□□ 2.08
SNHG6-204ENST00000521127 ATAD2Q6PL18 1390 aa28.04■■■□□ 2.08
SNHG6-204ENST00000521127 NPHP3Q7Z494 1330 aa28.04■■■□□ 2.08
SNHG6-204ENST00000521127 PXDNQ92626 1479 aa28.03■■■□□ 2.08
SNHG6-204ENST00000521127 XPCQ01831 940 aaPredicted RBP28.02■■■□□ 2.08
SNHG6-204ENST00000521127 FOXO3O43524 673 aa28.01■■■□□ 2.07
SNHG6-204ENST00000521127 WAPLQ7Z5K2 1190 aa28.01■■■□□ 2.07
SNHG6-204ENST00000521127 STK26Q9P289 416 aa28■■■□□ 2.07
SNHG6-204ENST00000521127 BCL9LQ86UU0 1499 aa27.99■■■□□ 2.07
SNHG6-204ENST00000521127 NUTM2FA1L443 756 aa27.98■■■□□ 2.07
SNHG6-204ENST00000521127 RGL3Q3MIN7 710 aa27.98■■■□□ 2.07
SNHG6-204ENST00000521127 TECPR2O15040 1411 aa27.98■■■□□ 2.07
SNHG6-204ENST00000521127 SPATA31E1Q6ZUB1 1445 aa27.97■■■□□ 2.07
SNHG6-204ENST00000521127 LRPPRCP42704 1394 aaKnown RBP27.97■■■□□ 2.07
SNHG6-204ENST00000521127 PLEKHH1Q9ULM0 1364 aa27.96■■■□□ 2.07
SNHG6-204ENST00000521127 TMEM132EQ6IEE7 984 aa27.95■■■□□ 2.06
SNHG6-204ENST00000521127 MARF1Q9Y4F3 1742 aaKnown RBP27.95■■■□□ 2.06
SNHG6-204ENST00000521127 CCDC144AA2RUR9 1427 aa27.94■■■□□ 2.06
SNHG6-204ENST00000521127 ABCC11Q96J66 1382 aa27.94■■■□□ 2.06
SNHG6-204ENST00000521127 SRCAPQ6ZRS2 3230 aa27.93■■■□□ 2.06
SNHG6-204ENST00000521127 IFT172Q9UG01 1749 aa27.92■■■□□ 2.06
SNHG6-204ENST00000521127 ANKRD30BQ9BXX2 1392 aa27.91■■■□□ 2.06
SNHG6-204ENST00000521127 GJD4Q96KN9 370 aaPredicted RBP27.9■■■□□ 2.06
SNHG6-204ENST00000521127 KNDC1Q76NI1 1749 aa27.89■■■□□ 2.05
SNHG6-204ENST00000521127 EP400Q96L91 3159 aa27.89■■■□□ 2.05
SNHG6-204ENST00000521127 SPATA31A3Q5VYP0 1347 aa27.88■■■□□ 2.05
SNHG6-204ENST00000521127 FMN2Q9NZ56 1722 aa27.87■■■□□ 2.05
SNHG6-204ENST00000521127 PIK3C2GO75747 1445 aa27.87■■■□□ 2.05
SNHG6-204ENST00000521127 MPHOSPH9Q99550 1183 aa27.87■■■□□ 2.05
SNHG6-204ENST00000521127 YTHDC2Q9H6S0 1430 aaKnown RBP27.85■■■□□ 2.05
SNHG6-204ENST00000521127 SLIT2O94813 1529 aa27.84■■■□□ 2.05
SNHG6-204ENST00000521127 UNC5CLQ8IV45 518 aa27.84■■■□□ 2.05
SNHG6-204ENST00000521127 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.84■■■□□ 2.05
SNHG6-204ENST00000521127 KRT28Q7Z3Y7 464 aa27.83■■■□□ 2.05
SNHG6-204ENST00000521127 ZRANB1Q9UGI0 708 aa27.83■■■□□ 2.05
SNHG6-204ENST00000521127 CCDC125Q86Z20 511 aa27.82■■■□□ 2.04
SNHG6-204ENST00000521127 GLI3P10071 1580 aa27.82■■■□□ 2.04
SNHG6-204ENST00000521127 RALGAPBQ86X10 1494 aa27.81■■■□□ 2.04
SNHG6-204ENST00000521127 KIF1AQ12756 1690 aa27.81■■■□□ 2.04
SNHG6-204ENST00000521127 SIRT1Q96EB6 747 aa27.8■■■□□ 2.04
SNHG6-204ENST00000521127 C14orf93Q9H972 538 aaKnown RBP27.79■■■□□ 2.04
SNHG6-204ENST00000521127 RGPD8O14715 1765 aaPredicted RBP27.78■■■□□ 2.04
SNHG6-204ENST00000521127 USP32Q8NFA0 1604 aa27.77■■■□□ 2.04
SNHG6-204ENST00000521127 PHF8Q9UPP1 1060 aa27.76■■■□□ 2.03
SNHG6-204ENST00000521127 CFAP70Q5T0N1 1121 aa27.75■■■□□ 2.03
SNHG6-204ENST00000521127 CABLES1Q8TDN4 633 aa27.75■■■□□ 2.03
SNHG6-204ENST00000521127 TNS3Q68CZ2 1445 aa27.74■■■□□ 2.03
SNHG6-204ENST00000521127 BRWD3Q6RI45 1802 aa27.74■■■□□ 2.03
SNHG6-204ENST00000521127 NRXN1Q9ULB1 1477 aa27.73■■■□□ 2.03
SNHG6-204ENST00000521127 PLEKHG5O94827 1062 aa27.71■■■□□ 2.03
SNHG6-204ENST00000521127 PSME1Q06323 249 aa27.71■■■□□ 2.03
SNHG6-204ENST00000521127 DHX57Q6P158 1386 aaKnown RBP27.71■■■□□ 2.03
SNHG6-204ENST00000521127 BLMP54132 1417 aaPredicted RBP27.7■■■□□ 2.03
SNHG6-204ENST00000521127 SAFB2Q14151 953 aaKnown RBP eCLIP27.7■■■□□ 2.02
SNHG6-204ENST00000521127 SEPT12Q8IYM1 358 aa27.7■■■□□ 2.02
SNHG6-204ENST00000521127 HAP1P54257 671 aaPredicted RBP27.69■■■□□ 2.02
SNHG6-204ENST00000521127 VPS72Q15906 364 aa27.69■■■□□ 2.02
SNHG6-204ENST00000521127 PRAM1Q96QH2 718 aa27.69■■■□□ 2.02
SNHG6-204ENST00000521127 SBNO1A3KN83 1393 aa27.69■■■□□ 2.02
SNHG6-204ENST00000521127 DEFB132Q7Z7B7 95 aa27.67■■■□□ 2.02
SNHG6-204ENST00000521127 LMOD2Q6P5Q4 547 aa27.66■■■□□ 2.02
SNHG6-204ENST00000521127 PLCH1Q4KWH8 1693 aa27.65■■■□□ 2.02
SNHG6-204ENST00000521127 ABCA3Q99758 1704 aa27.65■■■□□ 2.02
SNHG6-204ENST00000521127 ONECUT3O60422 494 aaPredicted RBP27.65■■■□□ 2.02
SNHG6-204ENST00000521127 PMFBP1Q8TBY8 1022 aa27.64■■■□□ 2.02
SNHG6-204ENST00000521127 NWD2Q9ULI1 1742 aa27.64■■■□□ 2.01
SNHG6-204ENST00000521127 FAM83GA6ND36 823 aa27.63■■■□□ 2.01
SNHG6-204ENST00000521127 ARHGEF10O15013 1369 aa27.62■■■□□ 2.01
SNHG6-204ENST00000521127 CCDC9Q9Y3X0 531 aaKnown RBP27.62■■■□□ 2.01
SNHG6-204ENST00000521127 POGKQ9P215 609 aa27.61■■■□□ 2.01
SNHG6-204ENST00000521127 DLC1Q96QB1 1528 aa27.61■■■□□ 2.01
SNHG6-204ENST00000521127 ANKARQ7Z5J8 1434 aa27.59■■■□□ 2.01
SNHG6-204ENST00000521127 KRT27Q7Z3Y8 459 aa27.58■■■□□ 2.01
SNHG6-204ENST00000521127 SF3B2Q13435 895 aaKnown RBP27.57■■■□□ 2
SNHG6-204ENST00000521127 ADGRB1O14514 1584 aa27.56■■■□□ 2
SNHG6-204ENST00000521127 ADGRB2O60241 1585 aa27.56■■■□□ 2
SNHG6-204ENST00000521127 TRPM3Q9HCF6 1732 aaPredicted RBP27.55■■■□□ 2
SNHG6-204ENST00000521127 HIRIP3Q9BW71 556 aaPredicted RBP27.55■■■□□ 2
SNHG6-204ENST00000521127 ACIN1Q9UKV3 1341 aaKnown RBP27.55■■■□□ 2
SNHG6-204ENST00000521127 PRR36Q9H6K5 1346 aa27.54■■■□□ 2
SNHG6-204ENST00000521127 TRAK1Q9UPV9 953 aa27.54■■■□□ 2
SNHG6-204ENST00000521127 NRAPQ86VF7 1730 aa27.53■■■□□ 2
SNHG6-204ENST00000521127 BTG4Q9NY30 223 aa27.52■■■□□ 2
SNHG6-204ENST00000521127 MINK1Q8N4C8 1332 aaPredicted RBP27.51■■□□□ 1.99
SNHG6-204ENST00000521127 FAM98CQ17RN3 349 aaKnown RBP27.51■■□□□ 1.99
SNHG6-204ENST00000521127 ALS2Q96Q42 1657 aa27.51■■□□□ 1.99
SNHG6-204ENST00000521127 A0A0G2JS52 829 aa27.49■■□□□ 1.99
SNHG6-204ENST00000521127 MYT1Q01538 1121 aa27.49■■□□□ 1.99
SNHG6-204ENST00000521127 GPRASP1Q5JY77 1395 aa27.48■■□□□ 1.99
SNHG6-204ENST00000521127 RAB3GAP2Q9H2M9 1393 aa27.48■■□□□ 1.99
SNHG6-204ENST00000521127 COL14A1Q05707 1796 aaKnown RBP27.46■■□□□ 1.99
SNHG6-204ENST00000521127 WASLO00401 505 aaPredicted RBP27.46■■□□□ 1.99
SNHG6-204ENST00000521127 KDM2AQ9Y2K7 1162 aa27.46■■□□□ 1.99
SNHG6-204ENST00000521127 TULP4Q9NRJ4 1543 aa27.46■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms